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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100440g1.2719.mrna |
| Orig protein id | gnl|cribi|Naga_100440g1.2719 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:135307..136655 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna45 ID=rna45|Name=rna45|organism=Nannochloropsis gaditana|type=mRNA|length=2109bp
GAGCGACGGGGCCCCGGACAACAGCACATCCCCTTCCGTAACTCCAAGCT
CACGTACCTGTTGCAAGACGCCCTGGGGGCGGAGAACAAGTGTTTGATGG
TCGTGTGTGTCTCCCCTGATGAGGAGGACAGCAGTGAATCCCTCTGTTCC
CTCACCTTTGCGCAGCGTGTCCATGGCGTCATCCTGGGCGCCGCCAAGGC
GCACGGCGGGAAGCTCGACACCCGCGCCCACAAGGAAGCTGTCCTGAAAG
CGAAGGAAGAAACCAAGGCAGCAGAAGCTGCGAGAGCTCTCCTAGCAGAG
GAGATGGCGAAATTGCAGGCAGAGCTGCACGAGACCCGGGAGGCCCAGGC
GGCGGCCGAGCGAGAACAAGGACATATGGGCCTGGCCGTGGCCCATATGC
AAGAGGCACACGGAGACCAAGCCACGCAATGGGCGGAGGAGAAGGAAAAA
TACGAACGGGCGTTGGAGGACGCGCATCGACAATGGCAGGCGGCCCGGCA
TGCGGCCCATCGCCTGAAAGAGGAGCATCATTTGGAACTGGAGCAGCAGA
GAATGCACGTGGAGGAGCTGATGATCGAGAAGGGGAAACTCCAAGCCCAG
CTAGCGGCAGCAACCTCGGCCCCACCCTCCCTTGCCCGGACAAATTTGAC
CAACACGACCCCGCGCCGTGTCCCCGTCGGGAAAGAGAAACGAGACACGA
TCCGAGAAGCGATCCATCCAGGAGCAGGTATACCAGCAGCAGCAGCCCCG
GCCACAGCGGTAGCTGCTGCTGCTGTACGGGACCAAAGGGTTCTCAGAGA
GAAAACGGGGCCAGGGGGTGAGACAAGTAACTGCCGCATGGGGCAGGAGC
GAGGGGAGAAGAGCGAGCGCGAAGATTTGACGAAAGTCGTGCCTAGCGTG
AAAATGGGAGGGGATAGCGCTCACGTCAAGAGTGTGGACGGCAGCAGCAG
CGATGGCAGCAGCAATCACAGCACTGGCGTCAGGAATGACAGCCACAGCC
ACGAAACTACCGCCAACACGGACGGCGACAACCTCAAGAAGCGCGGCGGC
ACTGTATCTGACAGAGACCTCGCCGCTCCCTGCACGGAGGCTGATGCCAG
CGACTCGACCTCGTTGAAGAGATCAAGGGCGGTGGCGGAGCCTGAAGGTA
GCCCCGGGCCCACTCCTACGCAAAACTTGTCCTCCCCATCCGCAATCTTG
TCTTCCCCGACCCCCTTCCGTCCTTGGGAATCCAATTCTGAGCGAAATAT
TGAGGCTGTGCCTGAGGCCTTGCCCACGAAACGCCAGAAGAAAGTCACTT
TTATGATTCCATCCCCGGGCCCCCGCTTGCCCACAGAGGGGGACATCCTG
GAAGGCGACCCGGACTTTGGACCTGCCAGGGAGGGCGAAAGGGAGGAGAA
TGGCCCAGACGGAGCCGAAGGCGGCGTCGAGGCCTCTTTCCAGCATCCGC
ACTACCGCACCACCCCTTTCAAAAAGCAGGAGGGGCCAGAGTTGCTGGCT
CCCGCCACACTGGGACACCAAGTGGGCCACGGCCATCCGGCGACGAGCAC
GTCCAAATCGGTCCCGGCCCCGGCGACCAAGAACCCCCGGCCGTTGATGA
TGCACAGCAATGCTAGCTTCGGCAGCAACCACAATGCTCCCAACGGAGTG
GCCGGTGGGAGTGGCTATGCGCCCCTCGGCATGCCGGCTCGGGTCATGCA
TCCCTCAGGGCCCACGTCGACTTCTTCAGGACCGACGAGCGCACTCTCCT
CCGCGCCTATGCGGAAGGCAGCGGCGCGAGTCCCCTCTGTTCCCTCGTAC
AAGACCCTGGGGGGTGGAAGCAGTGGCACGGCCGCCGTGGGATGCAGTGT
GGAGAGGACGAAGGAGCGAGTACTCTGGAGCAGCGGCAACGGCGTCAATA
CAGCGCCTGGCGCTGGCTCTACACGATTTAACGAGAACGCGGGCAAGGGG
CATTCGGACGACAAGGGGAGTGGTGGAGGGCGATGGCGGTAGGAAAGACC
CTGATGTTTCCTTATTCACGCGAATTTGTCGCGGGCAAAAGTAATTGATG
CACAACTGAAAGAAATAAACGAATCACCGCTTTGCAGGGGAAGTGAGTAC
TCCTTATGC back to topprotein sequence of rna45 >rna45-protein ID=rna45-protein|Name=rna45|organism=Nannochloropsis gaditana|type=polypeptide|length=206bp
MAYTFVAAAYKRGMSALHTVSFIRPSSSRSCSSPVLGWGSNSGNKKYDMS
SGARKASSLEAPGPSTGTGISGSWGQTGATPLSLPDRSPGEGPMLTYWIK
DTLYVAVTNRCNTVPLHVTRGPGFSMGDFSPLPPSYEPSEDELMASITGA
LAASHSLLNRAWTEVCFAGWGEPTLRWPTAAAAPEHERFGECGAEEEHRE
GRGRSL back to topmRNA from alignment at CM002455.1:135307..136655- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna45 ID=rna45|Name=rna45|organism=Nannochloropsis gaditana|type=mRNA|length=1349bp|location=Sequence derived from alignment at CM002455.1:135307..136655- (Nannochloropsis gaditana)
ATGGCATATACATTTGTAGCTGCAGCGTACAAACGGGGGATGTCAGCTTT
GCACACGGTGTCATTCATTCGTCCTAGCAGCAGCAGGTCTTGCTCTTCTC
CCGTCCTAGGGTGGGGCAGCAATTCCGGCAACAAGAAGTACGACATGTAC
GTCCAACGTTTCAGAGATGTAATCTTGTTTTGATCACTGACCTTAATTTA
TAGCCAACAAGAAGGCACATCAACCCAGAAGTCGGGATTGCCTGCACGGG
CGCTTCCCATCTGCGGAGAGACCTCCTCACCCCTCATGTACCAAGCCACC
TCTTGTTTCCCTGTCCGCCCTCTGGAAAAAGTCCATGAATCGTGTCAATG
CAATCAAATCTCTGTATTCATGCGCTACGACTCGCAAACCTGTCCGCCTG
GGCAGACACGCGCCGTCCTCCTGTACATCCTTCGTTTTCCTCCATGCCTG
CCGAGGGCACCCGATCTACCCGATAGCATGCTCGCAAAATATATGTATTC
AAGAATACCACACACTTCTCGTACTTTACATAGATCCCTCTGTTACCACC
ACCCCTCGCAGGAGCTCGGGTGCACGGAAGGCCTCCTCTTTGGAGGCACC
GGGACCGAGCACGGGCACGGGCATCTCCGGTAGCTGGGGCCAGACAGGCG
CTACCCCCCTCTCTCTCCCCGACAGATCGCCCGGCGAAGGGCCTATGCTC
ACCTACTGGATCAAAGACACGCTCTACGTGGCCGTGACCAACCGATGCAA
CGTGCGTTCCTCTCTCATCTTTCCTCCCTCCCTCCCTCTCGCCCGCCCTC
CCTCGCTCCCTACCTACCTACCTCTTTATTTCCCCCTTTCCCGCCTTCTA
CCTGGCCCATCGTGCATTTTCTCCTATGGACGTATGAGTATAAGCAATAT
TGCCCGTCAAGTGAGCACTCTAAGACGGTCTTCGATCCCTCCCTCCCTCC
CTCCTTCCCTCCCTCCCTCCTTCTTTCCCTCCCTCCCTCCCTCCCTCAGA
CCGTGCCTCTCCACGTCACGCGCGGCCCTGGCTTCTCCATGGGCGACTTC
AGTCCCCTTCCCCCCTCGTACGAGCCCTCGGAAGACGAGCTCATGGCCTC
CATCACCGGCGCGCTGGCGGCCTCCCACTCCCTCCTTAACCGGGCTTGGA
CCGAGGTATGTTTCGCTGGCTGGGGTGAACCTACCTTAAGATGGCCCACG
GTGCTGGCCTTGGCCGAGCGGCTCCGGCACGAGGAGAGCGTGGGCAAACG
GGGGGAGGGGGGAAGGCTGCGGCTGCGCCTGAGCACGAACGGTTTGGGGA
ATGTGGTGCAGAGGAAGAGCATCGTGAGGGACGTGGCCGAAGCCTTTGA back to topCoding sequence (CDS) from alignment at CM002455.1:135307..136655- >rna45 ID=rna45|Name=rna45|organism=Nannochloropsis gaditana|type=CDS|length=2484bp|location=Sequence derived from alignment at CM002455.1:135307..136655- (Nannochloropsis gaditana)
GCTGCGGCTGCGCCTGAGCACGAACGGTTTGGGGAATGTGGTGCAGAGGA
AGAGCATCGTGAGGGACGTGGCCGAAGCCTTTGAACCGTGCCTCTCCACG
TCACGCGCGGCCCTGGCTTCTCCATGGGCGACTTCAGTCCCCTTCCCCCC
TCGTACGAGCCCTCGGAAGACGAGCTCATGGCCTCCATCACCGGCGCGCT
GGCGGCCTCCCACTCCCTCCTTAACCGGGCTTGGACCGAGGTATGTTTCG
CTGGCTGGGGTGAACCTACCTTAAGATGGCCCACGGAGCTCGGGTGCACG
GAAGGCCTCCTCTTTGGAGGCACCGGGACCGAGCACGGGCACGGGCATCT
CCGGTAGCTGGGGCCAGACAGGCGCTACCCCCCTCTCTCTCCCCGACAGA
TCGCCCGGCGAAGGGCCTATGCTCACCTACTGGATCAAAGACACGCTCTA
CGTGGCCGTGACCAACCGATGCAACATGGCATATACATTTGTAGCTGCAG
CGTACAAACGGGGGATGTCAGCTTTGCACACGGTGTCATTCATTCGTCCT
AGCAGCAGCAGGTCTTGCTCTTCTCCCGTCCTAGGGTGGGGCAGCAATTC
CGGCAACAAGAAGTACGACATGCTGCGGCTGCGCCTGAGCACGAACGGTT
TGGGGAATGTGGTGCAGAGGAAGAGCATCGTGAGGGACGTGGCCGAAGCC
TTTGAACCGTGCCTCTCCACGTCACGCGCGGCCCTGGCTTCTCCATGGGC
GACTTCAGTCCCCTTCCCCCCTCGTACGAGCCCTCGGAAGACGAGCTCAT
GGCCTCCATCACCGGCGCGCTGGCGGCCTCCCACTCCCTCCTTAACCGGG
CTTGGACCGAGGTATGTTTCGCTGGCTGGGGTGAACCTACCTTAAGATGG
CCCACGGAGCTCGGGTGCACGGAAGGCCTCCTCTTTGGAGGCACCGGGAC
CGAGCACGGGCACGGGCATCTCCGGTAGCTGGGGCCAGACAGGCGCTACC
CCCCTCTCTCTCCCCGACAGATCGCCCGGCGAAGGGCCTATGCTCACCTA
CTGGATCAAAGACACGCTCTACGTGGCCGTGACCAACCGATGCAACATGG
CATATACATTTGTAGCTGCAGCGTACAAACGGGGGATGTCAGCTTTGCAC
ACGGTGTCATTCATTCGTCCTAGCAGCAGCAGGTCTTGCTCTTCTCCCGT
CCTAGGGTGGGGCAGCAATTCCGGCAACAAGAAGTACGACATGCTGCGGC
TGCGCCTGAGCACGAACGGTTTGGGGAATGTGGTGCAGAGGAAGAGCATC
GTGAGGGACGTGGCCGAAGCCTTTGAACCGTGCCTCTCCACGTCACGCGC
GGCCCTGGCTTCTCCATGGGCGACTTCAGTCCCCTTCCCCCCTCGTACGA
GCCCTCGGAAGACGAGCTCATGGCCTCCATCACCGGCGCGCTGGCGGCCT
CCCACTCCCTCCTTAACCGGGCTTGGACCGAGGTATGTTTCGCTGGCTGG
GGTGAACCTACCTTAAGATGGCCCACGGAGCTCGGGTGCACGGAAGGCCT
CCTCTTTGGAGGCACCGGGACCGAGCACGGGCACGGGCATCTCCGGTAGC
TGGGGCCAGACAGGCGCTACCCCCCTCTCTCTCCCCGACAGATCGCCCGG
CGAAGGGCCTATGCTCACCTACTGGATCAAAGACACGCTCTACGTGGCCG
TGACCAACCGATGCAACATGGCATATACATTTGTAGCTGCAGCGTACAAA
CGGGGGATGTCAGCTTTGCACACGGTGTCATTCATTCGTCCTAGCAGCAG
CAGGTCTTGCTCTTCTCCCGTCCTAGGGTGGGGCAGCAATTCCGGCAACA
AGAAGTACGACATGCTGCGGCTGCGCCTGAGCACGAACGGTTTGGGGAAT
GTGGTGCAGAGGAAGAGCATCGTGAGGGACGTGGCCGAAGCCTTTGAACC
GTGCCTCTCCACGTCACGCGCGGCCCTGGCTTCTCCATGGGCGACTTCAG
TCCCCTTCCCCCCTCGTACGAGCCCTCGGAAGACGAGCTCATGGCCTCCA
TCACCGGCGCGCTGGCGGCCTCCCACTCCCTCCTTAACCGGGCTTGGACC
GAGGTATGTTTCGCTGGCTGGGGTGAACCTACCTTAAGATGGCCCACGGA
GCTCGGGTGCACGGAAGGCCTCCTCTTTGGAGGCACCGGGACCGAGCACG
GGCACGGGCATCTCCGGTAGCTGGGGCCAGACAGGCGCTACCCCCCTCTC
TCTCCCCGACAGATCGCCCGGCGAAGGGCCTATGCTCACCTACTGGATCA
AAGACACGCTCTACGTGGCCGTGACCAACCGATGCAACATGGCATATACA
TTTGTAGCTGCAGCGTACAAACGGGGGATGTCAGCTTTGCACACGGTGTC
ATTCATTCGTCCTAGCAGCAGCAGGTCTTGCTCTTCTCCCGTCCTAGGGT
GGGGCAGCAATTCCGGCAACAAGAAGTACGACAT back to top
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