rna4481, rna4481 (mRNA) Nannochloropsis gaditana

Overview
Namerna4481
Unique Namerna4481
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1804
Alignment locationCM002463.1:693731..694509 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100025g8.7493.mrna
Orig protein idgnl|cribi|Naga_100025g8.7493
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:693731..694509 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100025g8gene4323Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4481rna4481-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26202.1cds4470Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4481 ID=rna4481|Name=rna4481|organism=Nannochloropsis gaditana|type=mRNA|length=1804bp
ACCAGGGCACAATTTTGTCGCCGCTCCTGTTGTCATGGCGTCAACAGGGA
CTACAAGTGGGCCACCATCGCGAGGCCCTCTGCCAGCCTACCTCCAACCA
CAACAGCATCAAGAACAACAGCAGCAAAGCACAAGTACAGCAAATCCTGA
AATCTTTGTGCGACGATTGTACAAGCCGCGCCTCTGTGACCAAGTCAACA
CCACGGCCGGGACTCAGCTTGCGTCGCTCAGCCGCCGCATGAGCGCGGGT
AACAGAGGGAGCGGCGCGGGAGAGGGAGTCAAATCGTCGACATGTACGGT
ATTGGCAGCTGAGCTGGTCCAATCCGACTATTTGCTTCAGCCCTCACTGA
CCCTGCCTGAAGAATTTGGTAAAATCTACCTGGGCGAGACGTTCTGTGCT
TACGTGTCTATAGTCAACACCTTGCCATTCTCCATCCTCCTCTTCGAGGC
TCACGCCTCTCTGAAAGCTTCGCGAGGCAACGAAGTGCAGTTGCAGAACA
CGGTAGCAACCCGGCAGGCTGATCTTGTCGGGGATGCGCCTCCTCCTGTA
CCTGACCAGTGGGGAGGGTTAGGGGTGCGTCGGGATCGGCCGCTAGAGCT
GCGACCGGGCGAGAACTTGGACGTTGTGGTAGAGCATGTGCTGCAAGAGC
TAGACTGGCATTACCTGGCCATCAATCTGGAACTTGCCCCGACGTCGAAT
ACGGGGACGAGAACTGGCGGGGAGGCCCCCAGGGTGATGATGAAGCGTTT
CAAATTCAAGGTGTCCAACCCTGTCGCCCTGACAACCACACAGAGAGTCT
TGCCCTCGGGCCAGGTGCTCGTGCAGGCACAGATCAAAAACATCACGGAG
CGACACACCAATCTCTTCCTGGAGGACGTGACGTTCCTGGCGGCCGACAG
GCTGCATTCGGAGGCGGTGGGGTTGGCGCCGAATGGGCGGTCGGCGTTGG
GGGCGATGGAGCAATGGGGCGACCGAAGCCCGGAGGCAACACTTCCGTCC
GAGGAAAGGGAAAGCGATCCACTCGACTGTGTGGCAGCCTTTGACCGACA
CGTGTACCTGCAGCCGGAAGATGTGGCGCAGTTCCTCTACCGCCTGTCTT
ACCGGGCCGAAGACACCAGGGGCCCGCCCGATCAGGACGGGATGCAAGCG
TCATCTCCCGTCGCTCGCACCACCTTGTCTACAGGGACACCCCTGGGGCA
GCTGCGGGTGTCTTGGCGCACTACCTTGGGCGAAAGTGGCACCTTGTTGA
GCCCCCTGGTTGAGTGCTCAAGTGCCGTCGCCTCCACCGCCCCGCCGGTC
GAGCTACGGCTGTCGCGGCCTTTGCGCGCACTTCGGAGAGAAGGTGATTC
TGAGACATCATCTGTTGATGTCAAGCCTGCAAAGGATGACCAGGAGGGGG
CGGCAGTGCTGGTGCAAGGCCAGGTTTACGCGGCCCACTGTACATTATAC
AACAACACCGATAAGGACATATGGCTCCAGGTGCAATTCCATCTCGACGC
CATGCAAGGCGTCTATATCACGGGGAAATCATTCCAGAATGCTGGTCAGG
TCCGTTCTCATGGGACTCAGAACCTGCTCTTCCATTTTCTCCCCCTGATG
GCCGGTCTTCATGACGTCAAGGGGATCACCATTCTGGACATGGTCACGGC
CCAGGAATATCATCAAGATCGTCTCTGCCAGGTAATGGTGTTGCGACGCT
CTGAGTCCGTAGGACAGGGGTTGGGAAGCGGTAAAGTAACATCACTGCCA
GCCCTTCCCCCGGAAGAGCCGTGCAAAAGTCATTAAACGGGTACGGTCCT
ATGG
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protein sequence of rna4481

>rna4481-protein ID=rna4481-protein|Name=rna4481|organism=Nannochloropsis gaditana|type=polypeptide|length=153bp
MQSRCMAPQNNLYVPGSEEVSCALCKPLHAILVPSFLPLYCINHLPRTRR
QFMQHHGVAFFLDRKGSGASGTGSGGTIAAPSTGAGHEKPQYRIDEGKPS
SYKTMEGTKLQLMPSLLMLHQIGAHVIEHAHYRMRHDDELEALDVQCKTG
IGH
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mRNA from alignment at CM002463.1:693731..694509-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4481 ID=rna4481|Name=rna4481|organism=Nannochloropsis gaditana|type=mRNA|length=779bp|location=Sequence derived from alignment at CM002463.1:693731..694509- (Nannochloropsis gaditana)
ATGCAATCGCGGTGCATGGCACCACAGAACAACTTGTACGTTCCGGGGAG
TGAAGAGGTCAGCTGTGCGCTTTGCAAGCCCTTACATGCCATATTGGTGC
CGTCATTTCTCCCGTTGTACTGCATCAATCACCTCCCTCGTACAAGACGG
CAATTTATGCAGCATCATGGCGTCTAACATCGTCGATAATATGGTTCGAT
ACGAGTGGCTTCTCCGTACCTGATGCATGACGTCTGTGGGCCGGCTCGAT
AAGATCCGAAGGCTTACGGGCCCAAGGAATGGGCAAGTTGTGGGTGGGTG
GGTTTCGATTCTTTTTCGGATCAGGATTTTAGAACTATTTAAATGTGTCT
AATTTGGCAGGAAAGCTGTCTAAAGGCTTCAAATGAGTGAAAATATCTCA
AATAAATTAAAAAGGCCATCAAGCCCATGCGCTCCGCACGCTTTTCGCTC
TGTCTCTCCTTCTTGGACTCAAAGCTCGCCACACATAGGTGGCATTCTTC
TTGGACAGAAAGGGAAGTGGAGCTTCCGGAACAGGTAGCGGCGGCACCAT
AGCCGCCCCATCAACTGGTGCTGGTCATGAAAAACCGCAATACCGGATCG
ACGAAGGGAAGCCAAGCTCCTACAAGACGATGGAGGGAACCAAGCTCCAG
CTCATGCCATCACTTCTCATGCTGCACCAGATCGGGGCCCACGTCATCGA
GCATGCGCATTACCGAATGCGTCATGATGACGAACTTGAGGCACTTGATG
TCCAATGCAAGACTGGCATTGGACATTAG
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Coding sequence (CDS) from alignment at CM002463.1:693731..694509-

>rna4481 ID=rna4481|Name=rna4481|organism=Nannochloropsis gaditana|type=CDS|length=924bp|location=Sequence derived from alignment at CM002463.1:693731..694509- (Nannochloropsis gaditana)
GTGGCATTCTTCTTGGACAGAAAGGGAAGTGGAGCTTCCGGAACAGGTAG
CGGCGGCACCATAGCCGCCCCATCAACTGGTGCTGGTCATGAAAAACCGC
AATACCGGATCGACGAAGGGAAGCCAAGCTCCTACAAGACGATGGAGGGA
ACCAAGCTCCAGCTCATGCCATCACTTCTCATGCTGCACCAGATCGGGGC
CCACGTCATCGAGCATGCGCATTACCGAATGCGTCATGATGACGAACTTG
AGGCACTTGATGTCCAATGCAAGACTGGCATTGGACATTAGATGCAATCG
CGGTGCATGGCACCACAGAACAACTTGTACGTTCCGGGGAGTGAAGAGGT
CAGCTGTGCGCTTTGCAAGCCCTTACATGCCATATTGGTGCCGTCATTTC
TCCCGTTGTACTGCATCAATCACCTCCCTCGTACAAGACGGCAATTTATG
CAGCATCATGGCGTGGCATTCTTCTTGGACAGAAAGGGAAGTGGAGCTTC
CGGAACAGGTAGCGGCGGCACCATAGCCGCCCCATCAACTGGTGCTGGTC
ATGAAAAACCGCAATACCGGATCGACGAAGGGAAGCCAAGCTCCTACAAG
ACGATGGAGGGAACCAAGCTCCAGCTCATGCCATCACTTCTCATGCTGCA
CCAGATCGGGGCCCACGTCATCGAGCATGCGCATTACCGAATGCGTCATG
ATGACGAACTTGAGGCACTTGATGTCCAATGCAAGACTGGCATTGGACAT
TAGATGCAATCGCGGTGCATGGCACCACAGAACAACTTGTACGTTCCGGG
GAGTGAAGAGGTCAGCTGTGCGCTTTGCAAGCCCTTACATGCCATATTGG
TGCCGTCATTTCTCCCGTTGTACTGCATCAATCACCTCCCTCGTACAAGA
CGGCAATTTATGCAGCATCATGGC
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Synonyms
Publications