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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF974 |
| Orig transcript id | gnl|cribi|Naga_100025g9.7506.mrna |
| Orig protein id | gnl|cribi|Naga_100025g9.7506 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:691530..693333 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4480 ID=rna4480|Name=rna4480|organism=Nannochloropsis gaditana|type=mRNA|length=1983bp
CGGCTTCAGCGAGCATTCCTCGAAGGATGATATCAAGTACTAAGAACCGC
AGTTCGCGCTTCTGTCTCGGTGAATGACAGCAGGTTCGTCTACACAGCAC
TTCCACAGGTGTTTTGGGGGGAAGCGTGGGGCTGCTCCGGGCTTTTTGGC
TTATGGAAACTTTTCTTCAATTGCTCGCCTGACTGGCTGCCTTCTAGTCC
GCACTCTGTTTGACACCTCAATGACAACGAACAAGCATCAAAAGGGCAAA
CATAAGCGCCACCGGTCACAGTCTCCTATCTTTACTTCAGATGCATCCAC
ACCTTTCAGTACTTGTGCTTCTGCTCCATCGTCAGACCGAGCAAAGACCT
TTCAAGACCCAAGTGATTACCCACACGGTGGCGGGAGCGATAGCGACGTG
AAAACCTATGCCGATATGTCCGGCAGCAGCAAGAGAGGGGTTACAATATT
ACCTGACAGCGCTGCAGATGGCATTTCTGGAGGTAAGGATCGTGCTGGTG
CCAAGGATGGGAAATCTTTTCCACAAGGCAGGCGGAGCTCCATTGGACAG
GCCCCCGCACCCGCCATTCACTTGCACGAATGCATCGCGGGGCTTTTTGA
GGACGGTGAACACTCGATTGGAAGAAGCTACACAGAAGCTGCTCTGCAAC
ACTGGCGCAGTCTTGACACGGAAAGGAAAGGGCAATTGCTCAGCGGCATA
ACGAGGGAGGATGTGTACGAGTGCTTGCGGGACGTCGAGATCACGACACA
ATTTCCCGTGGAGGGAGAGCCCCGCGAGGAGACAGGAAAGGCCGTGGCGC
AGCAGTTCTTGCACGCAATGGAGGTCCAGGATGGTGTTTTCCGGTTTCCC
TCAGCCCCATCCCTGGAATTTGTGGGCTTCTTTGCCTCGCTCGAAAGAAA
CTTGCTCATGTCCATGGAGGAGGAGAACCTGAGAAATCAAGCAGCCATGG
TTGGATGCCTTCTCTTGTGGCGGCAGTCTTGGTGGATGTACGCAATTATT
CCTGTTGTCCTTCTTCTTCTGCTCGAGAACGCTTGGTGCAGAAAAGCAAG
GAGCTGCCTGTGGGAGCTCCTCTCGCAAAGCTTCCTCAGGCGACGTCGTT
GGCAGCCGTATGTGCGATGGAAGGTAGAGGCTTATAGTGTTGCAGCTCTA
AGCATTGCTATGGCATCGCAGAGCAAGTGGTGTTACAAAGTTACCCTGCT
TTTCATAGGCCTGGTGCTCTTCCTGGACTATCGGTCTGCGTCGTCCACGT
CTTTGTACGCTGACTCCAAGGCCCTCGTCACTGTCCGTCAGCTGCTTCTG
CATTTACAGAAATTTCTGCTCCTCTATCTTGCCTACCATTCCTACGTCGC
ACTTTTCACAGTCTGCCTCTCCTACTTCCCCACTTTCACTGTTCTTCTTC
TCTCCAGCGTCTACTTCCTCGCTGGGCTGGGCATCTCTCTTTTTTGGCAA
ATTGTGCACGACAAGCTCTTATCCTATTTCCCCCGCTGGCGGGATAGTTT
AGACGCATGGTGGCAGGACGGGCGAGATGGGCTGAATCGAGCTATGGTGC
TGGCGCTGATTGCCGTCACCGTTATACCCTACACATTTTACTCGAGCTGG
AACACAATTCCAGCTTGGCGGGGAACCTTCTGGCGATTTTTGAGCGTGAT
GGTGGTGACCAATTTGGCTTCGGTTGAGGATCTGAAGCGGACCTACAATG
CAGGAAAAGAGTCAGCAAGAAACGTAATGTACCGCATGAAGCGAGGGCTC
AAGAGATGGAGTGCTTTTTCACGAGATGGGAATAAAGCGCCCAAAACGTG
TCGGAAAGCCGGAAAAATGGATTAAATAGGCTGTATACGATGTATGTGGA
CACAAATGTATCATTGAAGAGCTAATGGGAAGAGCCAATGCACATAGCAG
ATAAATGAAGAAAGGATTGCGCATCTGAGTTGTGTTTGTTTTCACAGCTT
TTAATTAGGAGGAGGAAACGTAGTTTATTTATT back to topprotein sequence of rna4480 >rna4480-protein ID=rna4480-protein|Name=rna4480|organism=Nannochloropsis gaditana|type=polypeptide|length=583bp
MASTGTTSGPPSRGPLPAYLQPQQHQEQQQQSTSTANPEIFVRRLYKPRL
CDQVNTTAGTQLASLSRRMSAGNRGSGAGEGVKSSTCTVLAAELVQSDYL
LQPSLTLPEEFGKIYLGETFCAYVSIVNTLPFSILLFEAHASLKASRGNE
VQLQNTVATRQADLVGDAPPPVPDQWGGLGVRRDRPLELRPGENLDVVVE
HVLQELDWHYLAINLELAPTSNTGTRTGGEAPRVMMKRFKFKVSNPVALT
TTQRVLPSGQVLVQAQIKNITERHTNLFLEDVTFLAADRLHSEAVGLAPN
GRSALGAMEQWGDRSPEATLPSEERESDPLDCVAAFDRHVYLQPEDVAQF
LYRLSYRAEDTRGPPDQDGMQASSPVARTTLSTGTPLGQLRVSWRTTLGE
SGTLLSPLVECSSAVASTAPPVELRLSRPLRALRREGDSETSSVDVKPAK
DDQEGAAVLVQGQVYAAHCTLYNNTDKDIWLQVQFHLDAMQGVYITGKSF
QNAGQVRSHGTQNLLFHFLPLMAGLHDVKGITILDMVTAQEYHQDRLCQV
MVLRRSESVGQGLGSGKVTSLPALPPEEPCKSH back to topmRNA from alignment at CM002463.1:691530..693333+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4480 ID=rna4480|Name=rna4480|organism=Nannochloropsis gaditana|type=mRNA|length=1804bp|location=Sequence derived from alignment at CM002463.1:691530..693333+ (Nannochloropsis gaditana)
ACCAGGGCACAATTTTGTCGCCGCTCCTGTTGTCATGGCGTCAACAGGGA
CTACAAGTGGGCCACCATCGCGAGGCCCTCTGCCAGCCTACCTCCAACCA
CAACAGCATCAagaacaacagcagcaaagCACAAGTACAGCAAATCCTGA
AATCTTTGTGCGACGATTGTACAAGCCGCGCCTCTGTGACCAAGTCAACA
CCACGGCCGGGACTCAGCTTGCGTCGCTCAGCCGCCGCATGAGCGCGGGT
AACAGAGGGAgcggcgcgggagagggagtcaAATCGTCGACATGTACGGT
ATTGGCAGCTGAGCTGGTCCAATCCGACTATTTGCTTCAGCCCTCACTGA
CCCTGCCTGAAGAATTTGGTAAAATCTACCTGGGCGAGACGTTCTGTGCT
TACGTGTCTATAGTCAACACCTTGCCattctccatcctcctcttcgaggC
TCACGCCTCTCTGAAAGCTTCGCGAGGCAACGAAGTGCAGTTGCAGAACA
CGGTAGCAACCCGGCAGGCTGATCTTGTCGGGgatgcgcctcctcctgta
ccTGACCAGTGGGGAGGGTTAGGGGTGCGTCGGGATCGGCCGCTAGAGCT
GCGACCGGGCGAGAACTTGGACGTTGTGGTAGAGCATGTGCTGCAAGAGC
TAGACTGGCATTACCTGGCCATCAATCTGGAACTTGCCCCGACGTCGAAT
ACGGGGACGAGAACTGGCGGGGAGGCCCCCAGGGTGATGATGAAGCGTTT
CAAATTCAAGGTGTCCAACCCTGTCGCCCTGACAACCACACAGAGAGTCT
TGCCCTCGGGCCAGGTGCTCGTGCAGGCACAGATCAAAAACATCACGGAG
CGACACACCAATCTCTtcctggaggacgtgacgtTCCTGGCGGCCGACAG
GCTGCAttcggaggcggtggggttGGCGCCGAATGGGCGGTCGGCGTTGG
GGGCGATGGAGCAATGGGGCGACCGAAGCCCGGAGGCAACACTTCCGtcc
gaggaaagggaaagcgaTCCACTCGACTGTGTGGCAGCCTTTGACCGACA
CGTGTACCTGCAGCCGGAAGATGTGGCGCAGTTCCTCTACCGCCTGTCTT
ACCGGGCCGAAGACACCAGGGGCCCGCCCGATCAGGACGGGATGCAAGCG
TCATCTCCCGTCGCTCGCACCACCTTGTCTACAGGGACACCCCTGGGGCA
GCTGCGGGTGTCTTGGCGCACTACCTTGGGCGAAAGTGGCACCTTGTTGA
GCCCCCTGGTTGAGTGCTCAAGtgccgtcgcctccaccgccccgccggTC
GAGCTACGGCTGTCGCGGCCTTTGCGCGCACTTCGGAGAGAAGGTGATTC
TGAGACATCATCTGTTGATGTCAAGCCTGCAAAGGATGAccaggaggggg
cggcaGTGCTGGTGCAAGGCCAGGTTTACGCGGCCCACTGTACATTATAC
AACAACACCGATAAGGACATATGGCTCCAGGTGCAATTCCATCTCGACGC
CATGCAAGGCGTCTATATCACGGGGAAATCATTCCAGAATGCTGGTCAGG
TCCGTTCTCATGGGACTCAGAACCtgctcttccattttctccccctgATG
GCCGGTCTTCATGACGTCAAGGGGATCACCATTCTGGACATGGTCACGGC
CCAGGAATATCATCAAGATCGTCTCTGCCAGGTAATGGTGTTGCGACGCT
CTGAGTCCGTAGGACAGGGGTTGGGAAGCGGTAAAGTAACATCACTGcca
gcccttcccccggAAGAGCCGTGCAAAAGTCATTAAACGGGTACGGTCCT
ATGG back to topCoding sequence (CDS) from alignment at CM002463.1:691530..693333+ >rna4480 ID=rna4480|Name=rna4480|organism=Nannochloropsis gaditana|type=CDS|length=1752bp|location=Sequence derived from alignment at CM002463.1:691530..693333+ (Nannochloropsis gaditana)
ATGGCGTCAACAGGGACTACAAGTGGGCCACCATCGCGAGGCCCTCTGCC
AGCCTACCTCCAACCACAACAGCATCAagaacaacagcagcaaagCACAA
GTACAGCAAATCCTGAAATCTTTGTGCGACGATTGTACAAGCCGCGCCTC
TGTGACCAAGTCAACACCACGGCCGGGACTCAGCTTGCGTCGCTCAGCCG
CCGCATGAGCGCGGGTAACAGAGGGAgcggcgcgggagagggagtcaAAT
CGTCGACATGTACGGTATTGGCAGCTGAGCTGGTCCAATCCGACTATTTG
CTTCAGCCCTCACTGACCCTGCCTGAAGAATTTGGTAAAATCTACCTGGG
CGAGACGTTCTGTGCTTACGTGTCTATAGTCAACACCTTGCCattctcca
tcctcctcttcgaggCTCACGCCTCTCTGAAAGCTTCGCGAGGCAACGAA
GTGCAGTTGCAGAACACGGTAGCAACCCGGCAGGCTGATCTTGTCGGGga
tgcgcctcctcctgtaccTGACCAGTGGGGAGGGTTAGGGGTGCGTCGGG
ATCGGCCGCTAGAGCTGCGACCGGGCGAGAACTTGGACGTTGTGGTAGAG
CATGTGCTGCAAGAGCTAGACTGGCATTACCTGGCCATCAATCTGGAACT
TGCCCCGACGTCGAATACGGGGACGAGAACTGGCGGGGAGGCCCCCAGGG
TGATGATGAAGCGTTTCAAATTCAAGGTGTCCAACCCTGTCGCCCTGACA
ACCACACAGAGAGTCTTGCCCTCGGGCCAGGTGCTCGTGCAGGCACAGAT
CAAAAACATCACGGAGCGACACACCAATCTCTtcctggaggacgtgacgt
TCCTGGCGGCCGACAGGCTGCAttcggaggcggtggggttGGCGCCGAAT
GGGCGGTCGGCGTTGGGGGCGATGGAGCAATGGGGCGACCGAAGCCCGGA
GGCAACACTTCCGtccgaggaaagggaaagcgaTCCACTCGACTGTGTGG
CAGCCTTTGACCGACACGTGTACCTGCAGCCGGAAGATGTGGCGCAGTTC
CTCTACCGCCTGTCTTACCGGGCCGAAGACACCAGGGGCCCGCCCGATCA
GGACGGGATGCAAGCGTCATCTCCCGTCGCTCGCACCACCTTGTCTACAG
GGACACCCCTGGGGCAGCTGCGGGTGTCTTGGCGCACTACCTTGGGCGAA
AGTGGCACCTTGTTGAGCCCCCTGGTTGAGTGCTCAAGtgccgtcgcctc
caccgccccgccggTCGAGCTACGGCTGTCGCGGCCTTTGCGCGCACTTC
GGAGAGAAGGTGATTCTGAGACATCATCTGTTGATGTCAAGCCTGCAAAG
GATGAccaggagggggcggcaGTGCTGGTGCAAGGCCAGGTTTACGCGGC
CCACTGTACATTATACAACAACACCGATAAGGACATATGGCTCCAGGTGC
AATTCCATCTCGACGCCATGCAAGGCGTCTATATCACGGGGAAATCATTC
CAGAATGCTGGTCAGGTCCGTTCTCATGGGACTCAGAACCtgctcttcca
ttttctccccctgATGGCCGGTCTTCATGACGTCAAGGGGATCACCATTC
TGGACATGGTCACGGCCCAGGAATATCATCAAGATCGTCTCTGCCAGGTA
ATGGTGTTGCGACGCTCTGAGTCCGTAGGACAGGGGTTGGGAAGCGGTAA
AGTAACATCACTGccagcccttcccccggAAGAGCCGTGCAAAAGTCATT
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