rna4431, rna4431 (mRNA) Nannochloropsis gaditana

Overview
Namerna4431
Unique Namerna4431
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1173
Alignment locationCM002463.1:578496..578765 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100025g62.7518.mrna
Orig protein idgnl|cribi|Naga_100025g62.7518
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:578496..578765 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100025g62gene4275Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4431rna4431-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26227.1cds4420Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4431 ID=rna4431|Name=rna4431|organism=Nannochloropsis gaditana|type=mRNA|length=1173bp
AACTATGAGGTGTGGATGATAAAGGAATGAAAGTGGGCGTGCGGGAGCAT
CAAAAAGAAGAAGATGTGAGAGCTACGATGGCCCGTCCGATGGAAATGCA
GCCCTTCTATAAACCGGTCCTTCCACGCCACAACCTCCTCCCCCCTTTGG
CTGCAGTCCTCTGTCTCCTTCTTTTGCTGTCACGACCAGATGCCACGACA
GAAGCTTTCGTACTACATTTAAGACAAGCGAAGCAGTGGAGAATCCAGGG
CGGAGCAACAACTACTGAAGATGGGGATGGACTGCTGTCGCACTTCCGTT
CTTTTTTTCAAGGAGAATTCGACAACGCTGTTCAGGTCGCAAGTGAGCGG
GCACAAGGCATTGAAGCCGGGCTTGGGGGAGGCCATGAACAAATACACTG
TGTATTGGAGCCTCTCGAACTAGCACACGGAGTGTTAGGAAATGATTCTT
TGTTTTGTGTTGGTGCTACCTATTATTTTGACGGCCGCCCTGATGCTGTA
TTTCGATGCCGTGTCTACAGCTTCCACCCCCCCCCTCCATCCCAAGGGTG
GGAAGACGAAGAAGACGGTTCGTCATTCTTCTTACCTCCTTTACCCTTTG
CTGAAATGCGGTTACATCGCTTCACACCAGACTTTGAAACCATCATGCGC
AAAAACAACTATGACATGAGGTTGCTGCAAGAACCCTGTAATCAGCTGGC
ACAGGTGGTGGAGGAATTGACAGGTTGCAGCATTCTATGGAGCGTGTGCA
CCGAAAGGATAGTAATAGGACAGGACATTGTGGGGAATGGAGAGGGTGAA
AGACCGGAGGTAGTGCACGGTGCGCGTTTTCAAGGCGAGATGCGAGAGGG
GTTCTGCCTGGTGGACTCGCAAAGAGAGGCCAACGTCCGGTTGAAGATCG
AGGATGACCTGTTGCTCACAGCGGACATGCTGTCGGTGAATGATCGAGGG
ACGGACTGTCGGACGGGTGAACTAGTCTACGGGAACCACCAGGGGTTGCC
GTACAGGATGCAGCGCCGGCGCTGAGGGCAAGGCGCTGAGGAAGCGAAGG
ACGTGTCGCCCACAAGCTGTTGGATCAGAGTATTAGTCTTTGGCACCGGC
CTCAAAACTCAAGGGCTTCGATAGATCCAAGAAACAATTTACAAAGCAAC
AATACGCGGCACGTCCGCCCTCA
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protein sequence of rna4431

>rna4431-protein ID=rna4431-protein|Name=rna4431|organism=Nannochloropsis gaditana|type=polypeptide|length=68bp
MERSIGRVNHIRWNQGTPHLHDSSMGELHLKGQLPWHSIEGVRVFPHLSL
SASHILSRDDPGSHLTWA
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mRNA from alignment at CM002463.1:578496..578765-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4431 ID=rna4431|Name=rna4431|organism=Nannochloropsis gaditana|type=mRNA|length=270bp|location=Sequence derived from alignment at CM002463.1:578496..578765- (Nannochloropsis gaditana)
ATGGAGCGGTCAATAGGTCGGTAAAGAAGAGGTAGGCTACGTGATTACCG
ACAAGGAAGCATTAAATAAAACGAAACTTTGAGTGTGAACCATATCAGAT
GGAACCAAGGAACCCCCCACCTGCATGACAGCAGCATGGGAGAGTTGCAC
CTGAAAGGTCAGCTTCCGTGGCACAGTATTGAAGGCGTACGCGTCTTTCC
GCATCTTTCACTTTCTGCTTCTCATATTTTAAGTCGAGATGACCCTGGCA
GTCACCTCACATGGGCATGA
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Coding sequence (CDS) from alignment at CM002463.1:578496..578765-

>rna4431 ID=rna4431|Name=rna4431|organism=Nannochloropsis gaditana|type=CDS|length=414bp|location=Sequence derived from alignment at CM002463.1:578496..578765- (Nannochloropsis gaditana)
TGTGAACCATATCAGATGGAACCAAGGAACCCCCCACCTGCATGACAGCA
GCATGGGAGAGTTGCACCTGAAAGGTCAGCTTCCGTGGCACAGTATTGAA
GGCGTACGCGTCTTTCCGCATCTTTCACTTTCTGCTTCTCATATTTTAAG
TCGAGATGACCCTGGCAGTCACCTCACATGGGCATGAATGGAGCGGTCAA
TAGGTCGTGTGAACCATATCAGATGGAACCAAGGAACCCCCCACCTGCAT
GACAGCAGCATGGGAGAGTTGCACCTGAAAGGTCAGCTTCCGTGGCACAG
TATTGAAGGCGTACGCGTCTTTCCGCATCTTTCACTTTCTGCTTCTCATA
TTTTAAGTCGAGATGACCCTGGCAGTCACCTCACATGGGCATGAATGGAG
CGGTCAATAGGTCG
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Synonyms
Publications