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Properties
| Property Name | Value |
|---|
| Product | putative methyltransferase bcdin3d |
| Orig transcript id | gnl|cribi|Naga_100145g8.9672.mrna |
| Orig protein id | gnl|cribi|Naga_100145g8.9672 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:555958..557318 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4417 ID=rna4417|Name=rna4417|organism=Nannochloropsis gaditana|type=mRNA|length=1410bp
ATGCCTCCTCCAACCTGCTCCAAAGAAGCTAATCGGTACAAAGTCTCACA
CCTTGAAGAGCGTGATGACACAGCCTACCGGCGCGCAGAGAAACAATATC
GACGCCAGCGCGTCCCCGTTAACAAACGTCGCAACCGCTTCGTCCGCCGG
GACCCTGACCTCGCCCACGCGATCGACTTTGCAAAACGAGGCAGTCGGAT
GGACCAGCGTGTGCTGCTTTTAGAAACGGTGGAAGGCGGTCGTGAAATTT
ACAGCGTTCGTGATCGCCCTGGGTTCTACTATATACGGGGTGCCTTGACC
TGGCAGGCACAAGTGCGTTGGGCACGTCGGTGCCTGACGGAATTTTCCCG
CTCGCCATTCACCAACATCACGAACCACATCCGTCTCGCCCTCCGCCCGG
CGCGCGACATGGAATGCCCGCATCAGTCTGGTCAAGAGGCTCTATGGGAC
GCAGCAGTACGGCGGGTAGAATCTGAGGGGTGGGAAGGAGGTGACGAGGA
GGACGGAGAGGAGAAGAGGACGGGTCAAGCCTTGCAACAGGCCCTTCAAG
ATTTATACGCCTTGCGATGGGCTAACCTAGGTGCAAACTACATTTGGACG
ACGCGGAAATACGCAGTACCTGTGAAAGAGGCCGCGAAAGAGGAGACGGG
GCGGGGCGGGGGCCTGAGGGAGGGCGAGACTGTCAGGGACTCGGGAGGGC
CGCATGCCACGAATAGGGACGAGGAGGGGGGTGCACAAGGCACCCCGTCT
AGTGTGCACTCCCGCGTGAGGAATTTACACGAAGGAAAGGTTGGGGCGGA
GGAGGTCGGGCTGCCTGAAAGAGCGGCTTTTCCGCCATCGGACGGTCTCC
CCGTGCCCCAGGCGTTGACCGATTTAGCGCGGGAGGTCCTCGAGGACATT
GCCCACGCGGAAAGCCACCGTCCCTGCGCCAGCAAGGGGGAGAGGGCGTT
CCCTCTACCGATGAATTTCCGCGGGGAGGCAGGGATCGTAAACTATTACC
CTCCGGAGAGTAGCATGGGGGGCCACGTCGACGACGCGGAGGGGGCCACG
AGCGTCCCTCTCGTCTCCTTCAGCCTGGGTTTGGGCTGCGTCTTCCTTTT
GGGGGGAAAGGACAAGGAGGTAGCGCCTGTGCCGCTTGTTTTCCGAAGTG
GCGATTGCATGGTCATGGCGGGAGAAGCGCGTTTGGCTTTCCATGGAGTG
CCCTGTATCCTGGAAGAGAGCGCCGGGCCGGATCCCGCATTGGGGCAATG
GACGAGGGTGGCGGCAGTCTTGCGGGAGGATGACGGAGCAAGTCGCGCGG
CGGAGGCTCGCATGCTGTCGCACTATTTGACATCCTCCAGGCTGAATTTC
AACGTGAGGCAAGTCTGGAGACGGGAGCTTTGCGAGGGGGCAGAAGGCTT
GCGCCCTTGA back to topprotein sequence of rna4417 >rna4417-protein ID=rna4417-protein|Name=rna4417|organism=Nannochloropsis gaditana|type=polypeptide|length=360bp
MVKSPSLAHGDSKADTGSERLSSSIPKYSIAVQGGHFNGNFPHYYSFHPF
ESRVAALLGIPSTCDRLALGKQNKNEAALAGILKYGDNKNGGRKRLLIAD
WGCNTGRLTRELCRRLRNLSHRPVAGLGLDFDENLINRAKEESVEEEKIE
GECGDVSFAAVDLVTDWARAEEIMRAFLDKDGDLGGNDDDSRPRHSRPLE
SVDGREETRQGRTIKFDLLTIFSTTMWIHLVHGENALETFLRRAAEWTHC
LVLEPQTQKSYKAARKRLKRAGFDPAVYFQPVTVADTSAMVMREDGKREW
GFTKAINLGASSAWGRELFVYYREERHEEEEEGESDIGDASEKERPRIKD
DRGRKRKSEG back to topmRNA from alignment at CM002463.1:555958..557318+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4417 ID=rna4417|Name=rna4417|organism=Nannochloropsis gaditana|type=mRNA|length=1361bp|location=Sequence derived from alignment at CM002463.1:555958..557318+ (Nannochloropsis gaditana)
ACAAACAGGGAGCAGATGCGGGGTCGGGGCGGGTAACTTGCATCGACTCG
GTCAACGCCATTCCAAgcaccaacctccccccctccagcactGGCACGTA
GATGGTCAAATCTCCGTCGCTGGCTCACGGTGACAGCAAGGCGGACACTG
GGAGCGAGCGACTCTCGTCATCGATACCGAAATATTCTATTGCTGTGCAA
GGAGGGCACTTTAATGGTAATTTTCCGCATTACTACTCTTTTCATCCTTT
CGAGTCACGCGTCGCTGCCCTGCTAGGCATACCCTCCACATGCGATCGTC
TGGCTCTTGGAAAGCAGAACAAAAACGAAGCGGCGTTAGCAGGTATTCTC
AAGTATGGAGACAATAAGAACGGTGGGAGAAAACGGCTTTTAATAGCTGA
CTGGGGCTGCAATACCGGTAGGCTGACCAGAGAGCTCTGTCGCCGCCTCA
GAAATCTCTCCCACCGACCTGTGGCAGGGCTAGGCCTGGACTTTGATGAA
AATCTCATTAATAGGGCAAAAGAGGAATcagtcgaggaggagaagatagA
GGGAGAGTGTGGGGACGTATCATTTGCGGCCGTCGATCTTGTCACGGATT
GGGCTCGGGCCGAGGAGATCATGCGGGCTTTTTTAGACAAAGATGGTGAC
CTGGGAGGAAATGACGACGACTCTCGTCCAAGGCATTCAAGACCTTTGGA
AAGTGTcgatgggagagaggagactCGTCAAGGCCGAACCATCAAGTTCG
ATCTGTTGACCATATTCTCAACGACGATGTGGATCCATCTAGTCCACGGA
GAGAACGCTCTTGAAACTTTCTTGAGGCGCGCTGCGGAATGGACGCACTG
TCTGGTCTTAGAGCCCCAGACACAAAAAAGCTACAAGGCGGCTCGCAAGC
GCCTGAAACGAGCAGGATTCGACCCGGCAGTGTATTTCCAACCGGTAACG
GTCGCAGACACGTCTGCCATGGTcatgagggaggacgggaagagggagtg
ggggtTCACGAAAGCGATTAACTTGGGGGCTTCGTCAGCATGGGGCAGGG
AGCTCTTTGTGTActacagggaggagagacacgaggaggaagaggaagga
gagagcgataTCGGCGACGCgtcggagaaggagagaccGAGGATCAAGGA
CGATCGGGGGCGGAAACGTAAATCGGAAGGATAAGAAATATTacaaaatg
aaaaaaaaggtaCTCCTGGTTGGCAGTTTGCACGCGATGCACAACACACG
AGCAGAATGAGAAACATTTGCACGGCTGCTCGGATGGATGTGCGTGGCGA
AATGCATGGGAATTGTGACGTAGACGCCTGTCCGAAGAATCACCCGCTTC
GGCATATATTT back to topCoding sequence (CDS) from alignment at CM002463.1:555958..557318+ >rna4417 ID=rna4417|Name=rna4417|organism=Nannochloropsis gaditana|type=CDS|length=1083bp|location=Sequence derived from alignment at CM002463.1:555958..557318+ (Nannochloropsis gaditana)
ATGGTCAAATCTCCGTCGCTGGCTCACGGTGACAGCAAGGCGGACACTGG
GAGCGAGCGACTCTCGTCATCGATACCGAAATATTCTATTGCTGTGCAAG
GAGGGCACTTTAATGGTAATTTTCCGCATTACTACTCTTTTCATCCTTTC
GAGTCACGCGTCGCTGCCCTGCTAGGCATACCCTCCACATGCGATCGTCT
GGCTCTTGGAAAGCAGAACAAAAACGAAGCGGCGTTAGCAGGTATTCTCA
AGTATGGAGACAATAAGAACGGTGGGAGAAAACGGCTTTTAATAGCTGAC
TGGGGCTGCAATACCGGTAGGCTGACCAGAGAGCTCTGTCGCCGCCTCAG
AAATCTCTCCCACCGACCTGTGGCAGGGCTAGGCCTGGACTTTGATGAAA
ATCTCATTAATAGGGCAAAAGAGGAATcagtcgaggaggagaagatagAG
GGAGAGTGTGGGGACGTATCATTTGCGGCCGTCGATCTTGTCACGGATTG
GGCTCGGGCCGAGGAGATCATGCGGGCTTTTTTAGACAAAGATGGTGACC
TGGGAGGAAATGACGACGACTCTCGTCCAAGGCATTCAAGACCTTTGGAA
AGTGTcgatgggagagaggagactCGTCAAGGCCGAACCATCAAGTTCGA
TCTGTTGACCATATTCTCAACGACGATGTGGATCCATCTAGTCCACGGAG
AGAACGCTCTTGAAACTTTCTTGAGGCGCGCTGCGGAATGGACGCACTGT
CTGGTCTTAGAGCCCCAGACACAAAAAAGCTACAAGGCGGCTCGCAAGCG
CCTGAAACGAGCAGGATTCGACCCGGCAGTGTATTTCCAACCGGTAACGG
TCGCAGACACGTCTGCCATGGTcatgagggaggacgggaagagggagtgg
gggtTCACGAAAGCGATTAACTTGGGGGCTTCGTCAGCATGGGGCAGGGA
GCTCTTTGTGTActacagggaggagagacacgaggaggaagaggaaggag
agagcgataTCGGCGACGCgtcggagaaggagagaccGAGGATCAAGGAC
GATCGGGGGCGGAAACGTAAATCGGAAGGATAA back to top
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