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Properties
| Property Name | Value |
|---|
| Product | c-1-tetrahydrofolate cytoplasmic |
| Orig transcript id | gnl|cribi|Naga_100073g14.10396.mrna |
| Orig protein id | gnl|cribi|Naga_100073g14.10396 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:484370..486447 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4396 ID=rna4396|Name=rna4396|organism=Nannochloropsis gaditana|type=mRNA|length=1908bp
GGGGTATCCTCTCTCCAAATAGTAGGGCCTGACCGAGAGTGGCCCGTTTT
GATGCAAGACCTTCGCCCTGGCCTCCCACGTTTCGTCACTGCGAACTTGG
ATGCAAAGTGCAGCTCGTGAGGGAGACTATAGGTATGCCTGATTCCGGAT
GCAGTTGCTGTATTTTTGAATATCTCGGCGCCTTCGGCATAGATACCCTC
CATGGCTTCCTACCCTCCCATGAACCACTCTCACGCTTGCCCCAGGAAGA
ATTCCAGTCACATGAAAACGTGGCAGCAAATCTGGCCGAACTATTAAATT
CCACAATAGCACGAGCCAAAATCGAGGTTCTTCCTGTTGTTTCAGCCCAA
GACACGCGCTCGCTCTTAAATGAAGATCCCCCCTCGCAACGACGGGCATT
GCTGCTTCTTTCAGGCCTTGCATCGGCGTACGTGTGGGGGGGCGGTGCAG
ATGTATCTCCGCGCAACTATCTTCCGCCTGCCATAGCTGTACCTCTTTAC
GAGGTGTCTTGCATGCTCGAAACATGTCCCATCCTCAGCCATCAAAGTAA
TTGCTTGTACAATTGGAAATATTCGGCGCTGGAAAAAGAAGCGCGAGAAT
CGAGCTGCCGCAGTCAATATCCTGGCGAATCTTTGTGCGGCGATGAAAGC
AATGAGTGGATTCTACATGCTGGTGAGGACACAGATCGCTTGGCGCCTTG
TCCTGCATGCTATTCAACGATGTCGACTACCCCTTTCCTTCGCACGAAAG
AGCTGTCCCTGACTTTCTCCTTCACAGAGGACGAGAACGAGCGAATGTTC
TACCTTCTCACCCTCGAAATCGAAAATATTGGCGCCCGGACTCTGCCTTT
GTTGGAGTACACGCGTCGCATTGCCCAGAAGCTTACTTCCAGTTCTGAAT
CAGGAGCGCAGAGGGATGAGTGCCAACATGAAGAAGGACAAGGGAGAGCT
TGCTCTCACGTAATTGCTTCGGATAAAGCTATGGTTGCCGCTTTAAAAGA
AGTTAAAAGACTGATACAACTCTGCCAGCAGGTCCTTCTCTCCATGCCTC
GGTTCGTCGATCCTGGATTTTTTTACCACCGCGTGCGGCCGTACCTCTCG
GGATGGCGCAACAACCCTGCGCTGCCCGAGGGGGTGATGTACAGAGGAGT
GGTGCCGCTTAAGGATAGATTCTTGGTTGGAGGAGCTGGGACCGAGACAA
GCGGGAGCCAGACACATGGGAAACGTGGTGAGGAAACAAGCGGATATGGA
GCGTGGGACGACCCTTTTCCGGACGAGCTGGCAGAAGCAAAGAACAATGC
TGGGGATAGCAGCGGCCCGACCCTGTTCTTGTCGGGGGCCTCCGCGGCAC
AAAGCTCCCTCATACCTGCCATTGACGTATACCTCGGTGTTGACCACAAT
GCGGCAGGGTCCCCGAGTCAGGCGTCCTACGAGTATCTGAAAGCGATGCG
CGCTTACATGCCTAAAGGACATCGCCGATTCCTGGACACGTTGGAAAAAG
ACCTCACCAGCTGCGAAGGGACCCCCATCGCGAGCATCCGTGAGTACATT
CAAAGATATGGAAGTGACCGAGAGACTATGAACGGGCCCGAACGCGAAGA
TAGGAAGGAGGTGCGGGAGGCGTACAATGGATGCGTTGGGGCCTTGCTGG
CTTTCCGCAAATCGCACTTAGGAATCGTGCATTTGTACATCTCTTCTCAG
CAAGGACAGGGAGAAAAAGGGGTGGGGACAGCTGGGTTGGGGGGAGCGGC
GGGTGGAAAAGGGACAGGTGGGCAGCCGCCCAGAGAGTTTTTGATGCCAT
TGCAACAGTGGACAGCGGCATCGCGACTAGCAACTCATTGACTTGATTTT
ATTCATAAGCTGGACACGTGTCGAAAGAAAAATGAAGAAAAGTTTAGTAA
AACTTATG back to topprotein sequence of rna4396 >rna4396-protein ID=rna4396-protein|Name=rna4396|organism=Nannochloropsis gaditana|type=polypeptide|length=315bp
MATPSSSSADNIIDGKVIAETIRGEIKEECAALLQSSGVTPGLAVVLVGN
RTDSATYVRMKIKACEEVGIHSFKFDFPSDVTEADLIAKVAELNADPAVH
GILVQLPLPGHIHEQKVLDTILPDKDVDGLHPLNLAQLAHTNTHGSSRKF
DLKTLPYHAACTPQGCIELIERSGTVIEGKEAVVIGRSNIVGIPVFLLLM
QKNATVTVIHSRTKDASAVCKRADIVVAAVGRAEMVKPDWIKPGAVVIDV
GINSVDDPTSKKGYRLVGDVDFAGCKAVAGKITPVPGGVGPMTIAMLLRN
TLQGAKRGLSGGNGN back to topmRNA from alignment at CM002463.1:484370..486447+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4396 ID=rna4396|Name=rna4396|organism=Nannochloropsis gaditana|type=mRNA|length=2078bp|location=Sequence derived from alignment at CM002463.1:484370..486447+ (Nannochloropsis gaditana)
TAGTGTACAAGGGCAAGGCATGCGCCTGCGATGCGCATGACTTTATTCAT
GTCAGTGTGCATGAACCTGTCTTTTGAGATATACATGCTAGTTGGGCGCC
TTTTAGTCACGAAGGACGAGCTTCGCACCATGGCGTGACGGTCTTTCAGG
GTGGACCCGTCTTTGCTTCCTGTGGTGTCCTGCTCTCTTATtccaccacg
ccccccccttttcatGAAGAATTGCGAGATGGCATCGGTTTTAATTTTTG
AGGGAGCGAATAGCGACAGAAAGCTACAACACTTGCGGGCTTGTTGATCG
CAAGCTCTCATTGCCATAGCTTTGTGCGGTATCACGTGTACCGacctgtc
ccctccttccgcgatCGTAGTATTTACATTTTCACACACACAGGATTCAA
AAATCGTCCTTCCATTCGCTCAACAGCGCAACACCGTGTCGCTGCTCTTC
TTGAAGACTCTTGCTCATAGTTTAGTCGTGTGCCTTCTGCTGTTAAGCCG
TGTCGGTACCTGTGCTTTAGATTCCGGAGGTGCCGCCCGTGTTTTTCCAC
GTACCCCTTGTCGCCTCGCACCCCGCGTCACAAAAGCCGCTGCGGTTGCC
GCTACGTTTGTCAACTCGCCTCGTTTTCAGTACAGACAAGTCACTCGGTG
CCACCGGCCCTCGAACCGAGTCACTGCTCCCCTCTATATTGAAGAAGACG
CTGCCCCTCGCCGCCCTTTCGACATCGAGCTACTTTTCCAAATGGCGACA
CCTTCGTCATCTTCGGCGGACAACATCATTGACGGGAAGGTTATTGCCGA
GACGATTCGGGGAGAAATCAAGGAGGAATGCGCTGCCCTTTTGCAGTCCT
CGGGCGTGACGCCGGGTCTGGCCGTCGTCCTGGTCGGGAACCGCACCGAC
TCGGCGACCTATGTCCGCATGAAAATCAAGGCctgcgaggaggtgggcat
TCATTCCTTCAAATTTGACTTCCCCTCGGACGTAACGGAAGCGGATTTGA
TCGCGAAGGTTGCCGAGCTGAATGCAGATCCGGCCGTGCATGGGATCTTG
GTCCAGCTGCCGTTACCGGGGCACATCCACGAGCAGAAGGTGTTAGATAC
CATTCTTCCCGACAAAGACGTGGACGGACTGCACCCTCTGAATCTAGCCC
AGCTCGCCCATACCAACACGCACGGCTCTTCGCGGAAGTTTGATCTGAAG
ACGCTGCCTTACCACGCAGCCTGCACGCCACAAGGATGCATCGAGCTGAT
CGAGCGGTCCGGCACCGTCAtcgagggcaaggaggctgtGGTGATTGGCC
GCTCCAACATTGTCGGGattcctgtcttcctcctgctcatgCAGAAGAAT
GCCACCGTGACGGTCATTCACAGTCGTACCAAAGACGCGTCTGCGGTCTG
CAAACGGGCCGACATCGTGGTCGCAGCCGTCGGGCGGGCGGAGATGGTCA
AGCCCGATTGGATCAAGCCTGGTGCGGTTGTGATCGACGTAGGCATCAAC
AGTGTGGACGACCCCACCTCGAAGAAAGGCTACCGGCTGGTAGGAGACGT
AGACTTTGCAGGGtgcaaggcggtggcggggaagATAACGCCAGTCCCCG
GAGGTGTCGGTCCCATGACAATCGCCATGCTCCTACGGAATACGCTACAG
GGAGCGAAGCGGGGCTTgtcgggggggaatggaaatTGACGCTGAGATGG
TTGAGGGGTACGAATGGCGTGGACACAGATCCgtggaggaatggaaaggg
tGAGATGTAAGATTTGCCGTCTGCGAGGACCCTCCATTGCGATGCTCAGG
TGGGGGCGGGCCATTCTGAGGGGAGCGAGAGAAACGATGTCATCGCAGGT
GGCATTTCTTGGGAGCGGTCACTCACTCATGCAAGCCTGACGGCTATGCT
GAATAGATAAAAAATTAGGTGCCTCACTTGCTTAACAAGCGCATATGATG
AGAACGATCTGAAATGtggcaagaaggaggtaTAAACTCAGAGATCGAAG
AAAGCCCCCAAGACACTAAAACGTGGGCGCCTTCTGGCGCTTTCTATCAT
AGACCCGCAACAAGATTACTTTCCTCGA back to topCoding sequence (CDS) from alignment at CM002463.1:484370..486447+ >rna4396 ID=rna4396|Name=rna4396|organism=Nannochloropsis gaditana|type=CDS|length=948bp|location=Sequence derived from alignment at CM002463.1:484370..486447+ (Nannochloropsis gaditana)
ATGGCGACACCTTCGTCATCTTCGGCGGACAACATCATTGACGGGAAGGT
TATTGCCGAGACGATTCGGGGAGAAATCAAGGAGGAATGCGCTGCCCTTT
TGCAGTCCTCGGGCGTGACGCCGGGTCTGGCCGTCGTCCTGGTCGGGAAC
CGCACCGACTCGGCGACCTATGTCCGCATGAAAATCAAGGCctgcgagga
ggtgggcatTCATTCCTTCAAATTTGACTTCCCCTCGGACGTAACGGAAG
CGGATTTGATCGCGAAGGTTGCCGAGCTGAATGCAGATCCGGCCGTGCAT
GGGATCTTGGTCCAGCTGCCGTTACCGGGGCACATCCACGAGCAGAAGGT
GTTAGATACCATTCTTCCCGACAAAGACGTGGACGGACTGCACCCTCTGA
ATCTAGCCCAGCTCGCCCATACCAACACGCACGGCTCTTCGCGGAAGTTT
GATCTGAAGACGCTGCCTTACCACGCAGCCTGCACGCCACAAGGATGCAT
CGAGCTGATCGAGCGGTCCGGCACCGTCAtcgagggcaaggaggctgtGG
TGATTGGCCGCTCCAACATTGTCGGGattcctgtcttcctcctgctcatg
CAGAAGAATGCCACCGTGACGGTCATTCACAGTCGTACCAAAGACGCGTC
TGCGGTCTGCAAACGGGCCGACATCGTGGTCGCAGCCGTCGGGCGGGCGG
AGATGGTCAAGCCCGATTGGATCAAGCCTGGTGCGGTTGTGATCGACGTA
GGCATCAACAGTGTGGACGACCCCACCTCGAAGAAAGGCTACCGGCTGGT
AGGAGACGTAGACTTTGCAGGGtgcaaggcggtggcggggaagATAACGC
CAGTCCCCGGAGGTGTCGGTCCCATGACAATCGCCATGCTCCTACGGAAT
ACGCTACAGGGAGCGAAGCGGGGCTTgtcgggggggaatggaaatTGA back to top
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