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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100073g17.10387.mrna |
| Orig protein id | gnl|cribi|Naga_100073g17.10387 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:477521..479098 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4394 ID=rna4394|Name=rna4394|organism=Nannochloropsis gaditana|type=mRNA|length=2932bp
CTCGCTTTCAACCTTAGTATATTACTTCACTCACTATTGATTTTTACGTG
TCACGACCTGTAGGCGCTGTTCGAGGAGCTTCGTTGCCTGCTTCCGCCCG
TATTCTGCCCCATCACTTGCGGTGCTCGTCTGCTGAATCTGTCCTCTCAC
GTCCTCCTTTCTGCGCCATCAACATGGGGGTGGCTCAGGCCAAATTGATC
CCACCCAAAGTTCGTCGTGTCTTTGCCCCCAAGAAGAGCAAGCCTTCGCC
CCCCGCCAAAGTTGCTGTTCCTCAGCCTCCAGTCATTCAGAATAGGGAAA
AAAGTATCGTGGACGAAGACTTCGAGGATCTGCCCGCCAACATAGCCTTC
AACGACATATATGAGTTGGAGGAGAAGTTAGGCAGCGGGACGTATGCAAC
CGTTTATAAGTGTCGGCGTCGGGGAAGTCAACTCAGACGCGCCGTAAAGG
TGTTGCACTTGCAAAAAATCTCGCGGCAGGAGCGCTTGCTGATTGAAGAA
GAGATCAGCATCCTGAAATCTCTTAACCATGATGGCATCGTACGCTTGCA
TCACGTTTTCCGCAATCCCCGCCGTATCTATATCGTCCAAGAATTGTGTG
CTGGTGGCGAGCTGTTTGACTCTATCGTGGAGCGTTCCAGGTACAGTGAG
GCGGATGCCCGGGAGGCAATGCGGGCGATCATGGAAGCCATCAGCTACGC
GCACGCACGTGGGGTGGTTCATCGGGACTTGAAGCCGGAGAACATTTTGC
TCGCGAGTAAAAAGGATCCCACCCGCCTCAAACTCTGCGATTTTGGCATG
TCTCATCGTCTTAAGGGCATGGATTGTCTGAAAACCATCTGCGGATCACC
GGGCTACATGGCGCCGGAAATCGTGAAAGAGGAGCCGTACGATGAGAAAG
TTGACGTCTGGGCTGCAGGTGCCATCCTGTTCTGTCTGCTGGCAGGATAC
CAGCCGTTTGAGGACAAGAGCATGCCGATGATGCTTGCGAAGATTAAGCG
GGGGTTTTATTCGTTGCGGCATCCTGTGTTCCGGCAGGTATCGGACGAGG
CCAAAGACTTGATCAAGCACATGCTTGTCGTAGACCCGCGGCGGCGAGTG
ACAGCCCGCGCTTGCCTGGAGCACAAATGGTTCGCTTTGAATTCGGAGAA
ACTCGATCGGGAGCTTACAACCGCGCAGGACATGCTCAAGGAGCAGATCA
ACTCCCGAAAATTCCGGCTAAAATCGGTGGCTGGTGCTATTATCCTGGCC
AATCGTCTCTCTCTCCTGCGGACCGGGGAATCGCTCTCACAAAGGAAGTC
CTCCGTCAGCGATTCGACCGAATCCTCGTCGTCACTGACCTCCGCAACTA
CGCGGTCCACTGCCTCCTCCATCTCCTCTTCCAATGCCAGCCTGGACAGC
TTCGCACAGTCCTCTCCGGCCAACTCCTCCTTGCTAGGTACCACACCTTC
TTCGGCCCATGCTTCTCCTCCTTTGTCGGCCGCCCCTACTATTAGAACTA
CAAGCACTCCCAGCGGCTCCCCCCCTCCGCAGTCGCCCGTCATCAGTTCT
ACTCCTACAGGCTCTCGGCACCTGCACCCGCCAACACGCAAGCCTGCACC
TCCCTCCACCCCGGTGGTGGAAAGCACTACTACTATCACCACGACCACAA
TTACCAAGGAGAAGACGACGACACATACCACCGTCGGCCGCCTTTCTGGG
TCTCCCGTCCCCCTCTCGGGTGTCAATCAAAGCTCCCGAATACTTGTGCC
GATCGCGCCTGGGATCGAAGGCCTGGATGATTTTTACCAAGAGCAACGAG
CACGACGTTTGCAGGAAGCAGGTTCTCAGCCCCTATCCCAGACCGCCGCC
GCCTGTTCGGCCAAGACGGTAAACACGGAGAAGACAGGAAGACAGAATAT
CTGCATGAAGCCCCATGAAGACACGGAGAACATCACGCAAAAAAACTACT
CCCGCACTGAGCAGCCGTCTTGCCCTACCTCCCCTTGTCAGTCGCAAGAA
GCTTCCATAACCCAAAAGATAGGGAGCGAGAGCAGTGTCAGTAGCTCAAA
ATCAACATTTAGGAAGTGCATTGACAGCAACAGCAGAAATGAAGAGAGTT
GCGTGCCCGACAACAGGAGTGGCTACAGCAACGGAGGCAAACAGAACCGA
GAGATGTGCGTGAACACTTCACGTCGAGTATCATTTAGCTCGCTCACAGA
GGGGAGGGATATATGTGAAAAGGGTAAAAGGTGAATCGACGCTCTATACA
GCAAGCCATGAAAATTTCAACATGCACGGAAAAAGATTACAGATAAATAG
AAGTGAGCTGTCTGATCAATGACAGGAGTGTCTTTCAAGGTGACACCGGG
GGGGGGGGTGTCGCGAGCCATCTGCCTTTCCAGAGAGGGTAAAGAGTCAA
AATTGACGGGATATTTAGAATTTCGCCGAGAAGATACAGTGGAATAAGTG
GTCTATCGCTTTGTATTCGTCGGGTTTATTCGTCGGGTTTGCCTGTAGAA
GGACTTCTGACGCATGGAGATTAAGGAGCGAATGTAATGCTGGACGAGAT
CCGAATGCCTGACTTCGTCAACGTGAGATTTGTGAAGGCCAGATTTAATC
GATAAATGAGAACGAAGCTTACTGAGAACGCTTGATAGACATCATGTCTG
CCATTCCTCGTAATCATCATCTAGGTGCTTTCTGAAATCTCAAGGCGTGA
AAGCTTGCCTTTTTGACCTGATAAGTTGCATTTAAGAGCCATCTTTTCAT
TGTTACCTGGCCTTGAAAAAAGAAAAGTGGTTTAGTTACTATAGGTAGAG
AGTAGAGAAAGGTATGCAAAATGGGGAGCCGTCCGTTAGGATGGTTAGAG
GAACATGGAATGTTACAGAATGAATTGTGATTAAGTATGGAGCGAGCAAA
AAGAAAGGTCTGTATTAATGGTGTTGTAGTGA back to topprotein sequence of rna4394 >rna4394-protein ID=rna4394-protein|Name=rna4394|organism=Nannochloropsis gaditana|type=polypeptide|length=372bp
MVVPKLLPYAVHEPPTGFDSLTAKAHGIIPLSAQRAFRDRHAHWFDRAVS
VSAVALGIRHPKALLRFLSLRRTAQTFHYGHESPDHFVELHRCGKPGAPL
VVFMHGGAWFSGRPWMYRLISTALNRRGMDVGIVGYGTYKTLPPIPGTRL
PDPALDGTADPAVVLGHVDHQVDDLQHCLEFLMLDPRSPYSADQVPIFLS
GHSSGAHICSLFLLRETLGAPGYNTLPRRVQGFVGLSGVYDVAVHHEYEA
RRGVHEISGMGACNGGLARFHRNSPTTLAGMLTPEQAGALPPFLIVHGVD
DETVPFTNSLVFASNLAGHGGRVKTAWLPEMDHQGTVAALMMHTDSEVER
HISAFMESAEKVGIGNTLKSKL back to topmRNA from alignment at CM002463.1:477521..479098- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4394 ID=rna4394|Name=rna4394|organism=Nannochloropsis gaditana|type=mRNA|length=1578bp|location=Sequence derived from alignment at CM002463.1:477521..479098- (Nannochloropsis gaditana)
GAGACAGGTTCTTGACACTTTGGCCTATAGGTTGCTTCTTCCCTCTATTC
CGAGCCAGTCTTCGCTGTCACGTCACCAGAGCGCGTCAGCGAAAACCGAT
CAAAAAGCCAAATGGTAGTCCCTAAGCTTTTGCCCTATGCCGTCCACGAG
CCCCCAACGGGCTTTGATTCCTTAACTGCCAAGGCGCATGGAATTATCCC
GCTGAGTGCTCAACGTGCTTTTAGAGACAGGCATGCGCACTGGTTTGATC
GAGCCGTCTCAGTGTCGGCGGTCGCTTTGGGCATAAGGCACCCGAAAGCA
CTTCTCCGATTTCTTTCCCTGCGTCGCACCGCTCAAACGTTCCACTACGG
TCACGAGTCTCCTGATCACTTTGTGGAGCTGCATCGGTGTGGAAAGCCGG
GAGCACCTCTCGTTGTCTTCATGCACGGCGGTGCATGGTTCAGCGGGCGG
CCCTGGATGTACCGTCTCATAAGCACCGCTCTGAACCGACGAGGCATGGA
TGTGGGCATCGTCGGTTACGGTACTTACAAGACGCTGCCACCCATCCCGG
GGACGAGACTACCAGATCCCGCCCTGGACGGCACGGCGGATCCCGCGGTC
GTGTTAGGACACGTGGACCATCAGGTAAGAAGTGCTGCCCTGGAGCACGC
ATGCGTCGACACAAGGCTTCCACACAATGCAGGCGATGTCGTGACTCAAA
ACGCTTCTCGTCAAAACACGTCAGGTGGACGACTTACAGCATTGCCTGGA
GTTTTTAATGCTTGATCCCCGCAGTCCCTACAGCGCGGACCAAGTACCCA
TCTTTCTCAGCGGCCATTCATCCGGAGCGCACATATGCAGCCTTTTCCTC
CTGCGCGAGACGCTGGGAGCACCCGGCTACAACACTCTTCCCCGCCGCGT
GCAAGGATTTGTGGGTTTAAGCGGCGTTTACGACGTGGCAGTACACCACG
AATACGAAGCTCGAAGAGGGGTCCACGAGATCAGTGGAATGGGCGCCTGC
AATGGCGGTCTCGCACGTTTTCACCGAAACTCGCCCACCACCTTGGCTGG
AATGCTGACACCAGAGCAGGCCGGAGCGCTTCCTCCTTTCTTGATTGTGC
ACGGTGTGGACGACGAAACGGTACCCTTCACGAACTCCCTCGTCTTCGCA
AGCAACCTAGCCGGGCACGGCGGGCGGGTGAAGACAGCCTGGCTACCGGA
GATGGACCATCAGGGCACCGTGGCAGCATTAATGATGCACACTGACAGTG
AGGTAGAACGTCATATCTCGGCATTCATGGAATCGGCGGAAAAAGTAGGG
ATTGGCAACACGCTGAAGTCCAAATTGTGAAAATTTCATAGGAGACCTAT
CACTGGTGAAGTTAATATGCAAATTATCATGGATTGGCCGCTTTCCAAGT
TTTAAACATGCATCGTCTCTTGAAAAATCGTTGAGAAGTATCGCAAAAAT
GTGCCAATGTGTAGACGGTAATGGATAATGATAAAAACAAAACAGCAAAG
CCTATGCGACAGAAGGGAATGGGGTTTTATTGTGATATCACAGTGAAAAA
CGAAATCAACCAGCGACGTTTGCACTCA back to topCoding sequence (CDS) from alignment at CM002463.1:477521..479098- >rna4394 ID=rna4394|Name=rna4394|organism=Nannochloropsis gaditana|type=CDS|length=2238bp|location=Sequence derived from alignment at CM002463.1:477521..479098- (Nannochloropsis gaditana)
GTGGACGACTTACAGCATTGCCTGGAGTTTTTAATGCTTGATCCCCGCAG
TCCCTACAGCGCGGACCAAGTACCCATCTTTCTCAGCGGCCATTCATCCG
GAGCGCACATATGCAGCCTTTTCCTCCTGCGCGAGACGCTGGGAGCACCC
GGCTACAACACTCTTCCCCGCCGCGTGCAAGGATTTGTGGGTTTAAGCGG
CGTTTACGACGTGGCAGTACACCACGAATACGAAGCTCGAAGAGGGGTCC
ACGAGATCAGTGGAATGGGCGCCTGCAATGGCGGTCTCGCACGTTTTCAC
CGAAACTCGCCCACCACCTTGGCTGGAATGCTGACACCAGAGCAGGCCGG
AGCGCTTCCTCCTTTCTTGATTGTGCACGGTGTGGACGACGAAACGGTAC
CCTTCACGAACTCCCTCGTCTTCGCAAGCAACCTAGCCGGGCACGGCGGG
CGGGTGAAGACAGCCTGGCTACCGGAGATGGACCATCAGGGCACCGTGGC
AGCATTAATGATGCACACTGACAGTGAGGTAGAACGTCATATCTCGGCAT
TCATGGAATCGGCGGAAAAAGTAGGGATTGGCAACACGCTGAAGTCCAAA
TTGTGAATGGTAGTCCCTAAGCTTTTGCCCTATGCCGTCCACGAGCCCCC
AACGGGCTTTGATTCCTTAACTGCCAAGGCGCATGGAATTATCCCGCTGA
GTGCTCAACGTGCTTTTAGAGACAGGCATGCGCACTGGTTTGATCGAGCC
GTCTCAGTGTCGGCGGTCGCTTTGGGCATAAGGCACCCGAAAGCACTTCT
CCGATTTCTTTCCCTGCGTCGCACCGCTCAAACGTTCCACTACGGTCACG
AGTCTCCTGATCACTTTGTGGAGCTGCATCGGTGTGGAAAGCCGGGAGCA
CCTCTCGTTGTCTTCATGCACGGCGGTGCATGGTTCAGCGGGCGGCCCTG
GATGTACCGTCTCATAAGCACCGCTCTGAACCGACGAGGCATGGATGTGG
GCATCGTCGGTTACGGTACTTACAAGACGCTGCCACCCATCCCGGGGACG
AGACTACCAGATCCCGCCCTGGACGGCACGGCGGATCCCGCGGTCGTGTT
AGGACACGTGGACCATCAGGTGGACGACTTACAGCATTGCCTGGAGTTTT
TAATGCTTGATCCCCGCAGTCCCTACAGCGCGGACCAAGTACCCATCTTT
CTCAGCGGCCATTCATCCGGAGCGCACATATGCAGCCTTTTCCTCCTGCG
CGAGACGCTGGGAGCACCCGGCTACAACACTCTTCCCCGCCGCGTGCAAG
GATTTGTGGGTTTAAGCGGCGTTTACGACGTGGCAGTACACCACGAATAC
GAAGCTCGAAGAGGGGTCCACGAGATCAGTGGAATGGGCGCCTGCAATGG
CGGTCTCGCACGTTTTCACCGAAACTCGCCCACCACCTTGGCTGGAATGC
TGACACCAGAGCAGGCCGGAGCGCTTCCTCCTTTCTTGATTGTGCACGGT
GTGGACGACGAAACGGTACCCTTCACGAACTCCCTCGTCTTCGCAAGCAA
CCTAGCCGGGCACGGCGGGCGGGTGAAGACAGCCTGGCTACCGGAGATGG
ACCATCAGGGCACCGTGGCAGCATTAATGATGCACACTGACAGTGAGGTA
GAACGTCATATCTCGGCATTCATGGAATCGGCGGAAAAAGTAGGGATTGG
CAACACGCTGAAGTCCAAATTGTGAATGGTAGTCCCTAAGCTTTTGCCCT
ATGCCGTCCACGAGCCCCCAACGGGCTTTGATTCCTTAACTGCCAAGGCG
CATGGAATTATCCCGCTGAGTGCTCAACGTGCTTTTAGAGACAGGCATGC
GCACTGGTTTGATCGAGCCGTCTCAGTGTCGGCGGTCGCTTTGGGCATAA
GGCACCCGAAAGCACTTCTCCGATTTCTTTCCCTGCGTCGCACCGCTCAA
ACGTTCCACTACGGTCACGAGTCTCCTGATCACTTTGTGGAGCTGCATCG
GTGTGGAAAGCCGGGAGCACCTCTCGTTGTCTTCATGCACGGCGGTGCAT
GGTTCAGCGGGCGGCCCTGGATGTACCGTCTCATAAGCACCGCTCTGAAC
CGACGAGGCATGGATGTGGGCATCGTCGGTTACGGTACTTACAAGACGCT
GCCACCCATCCCGGGGACGAGACTACCAGATCCCGCCCTGGACGGCACGG
CGGATCCCGCGGTCGTGTTAGGACACGTGGACCATCAG back to top
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