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Properties
| Property Name | Value |
|---|
| Product | Armadillo-like helical |
| Orig transcript id | gnl|cribi|Naga_100073g21.10384.mrna |
| Orig protein id | gnl|cribi|Naga_100073g21.10384 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:466225..469658 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4391 ID=rna4391|Name=rna4391|organism=Nannochloropsis gaditana|type=mRNA|length=666bp
ATGGCTATGATCGGCTCTCCTCAGATCGTGATTCTGGATGAGCCTAGCTC
TGGAATGGACGCTGTGGCTCGTCGCTTCATGTGGAAGGTCATCAGCGACA
TCACGACAAAGCGGGGCGAATGCTGTGTGATCCTCACGACACACAGCATG
GAGGAATGTGAGGCGCTGTGCACACGCATCGGCATAATGGTGGGAGGCCG
CTTCCGGTGCATGGGGTCTGCGCAGCATCTCAAGTCGCGATACGGGATGG
GCTACCAGCTAGAAATCTCCGTCGCATTGCCACGTGGGGAGATTGTACCG
GCCAGTGACGACGAGGACAGTGGGGACGAGACAGAGGGCAAACGAATGGT
CCTGCCGGCGGACGACACCTTTTTGGCTCGCCTCGAAGGCGCGGCGGCAC
GTCTCTCAACGCAGCGTTTCACTATGCCGCAGCTAGAGATAGCTCTAGCA
GCTATCGACAAGGCAGCGTGGCTTGAGGTTATCTCACCGACGGGCACTGG
AGCAGATGTATGGCAAACGGTGACGGCTTCAGGTAGTATAGAATATTTTG
AGGTTTATAATGGACAACTACCCCGATGCCGTCCTGCGAGAGCGCCAAGG
CACCAAGGTTCGCTTCGAGATTCCGTCCAAGGACACAAATACAGGGGCGG
CTCGCAAGCTCTCTGA back to topprotein sequence of rna4391 >rna4391-protein ID=rna4391-protein|Name=rna4391|organism=Nannochloropsis gaditana|type=polypeptide|length=978bp
MEPSSTTQDQQIQGDGSTFGEGGATLHAYSRPRRPESETLTYLRSLEPVI
DKSITALLQQNSNQRGTIVNDAQKRSQEVEEEENEAEERSLLVQNLIDEL
TFKVASLAMDRHAAPTLEKVARLCTRKQLAHLLHGCLGYAACLASNRYSS
HVLQTFLSLTGPMLEAELLGIGEEEDRDEGLDDKPPFSTGSEIDEAAPGE
GISLADTATKLAEELRASWLSLIFDLCGTHSMRAFFCLLAGMPAVAEKRG
RHAKHKHGIETAVAVGYQGIGAGPGDVRSKTQGETGNLHSTPLVMHRVPA
RLADILGEMVTELANMELRDLHQALCDPYASPALGLLVQAVARKESAVRQ
DFHLDTDGIFFKQLVAKALCFKDADRCAEVVYAMAGETMSSRFLEAVLWH
TAPTQVAARIFEACIRGRVMEFAEDSVANFVLQTWLQRTESPEHLKAALD
ELAPRVRRLVETRRAGVLWRLAGACLRLRHGQEEMVDGVVSGLGGAGGET
KKEEGTNSSRLDMAVLALQTGLELDVGQGHREGGHGTEHDRRLHLNVPGA
RLFECLMRFPTSSGKHRGSGWIICRAVLELPPETLVAVATDNIGSRTLLD
PLLGASSAGTELGAATIERRERSEGGGRTAENRGEKSKKRKTSDPHRDEI
NSSLADRLAQRLQGHYASLAAHPVGFHILTKCFSSSGLSLEWKKNVVQEL
IDAESRLAGGHFGRRALREVGVSLYRVNQAKWEEAQKEGERKKEVLDDLL
DMLEHEAEVAGKGRGASQRNGKMHGATKNRKEDVEKTSKRRREDNTEQQQ
LEPDSQNHSVFDLLMGASKYMAKSKERRGPDEQAEGAARDSKSLEFVLEA
TKTPCKSDTNIAVPSESKSKRVHKKRQSESGRSEKQERATRRQGNLQHAK
NESSAPSATKSLFKSSRQDGGLKKNHLANKTAIEKAQVILGNRAMMSKRE
LFSAVEGLEQEIKKEKHASDKQAGRRHV back to topmRNA from alignment at CM002463.1:466225..469658- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4391 ID=rna4391|Name=rna4391|organism=Nannochloropsis gaditana|type=mRNA|length=3434bp|location=Sequence derived from alignment at CM002463.1:466225..469658- (Nannochloropsis gaditana)
ACCCAACCTGTAGAGACACCTTACATACCCACATCGGTGGCGGCATTTCC
CATTCACATGTACGTATGCTCATATTGTCCAGTCCTGGGCGCTTTATGTC
GAATAGCACGCCTTCACAGGGGTTTCTTTACCGGAAAGCCACCTAGTATC
TTCCTCTTGCCGTGCCGTCACCGCTTGGTCCATGGAGCCATCCTCCACAA
CCCAAGATCAGCAAATACAAGGCGATGGAAGCACATTTGGTGAAGGTGGA
GCAACTCTTCACGCTTATTCCCGGCCACGTCGGCCAGAAAGCGAGACATT
GACTTATTTGCGCTCACTTGAGCCTGTCATCGACAAAAGCATCACCGCCC
TCCTCCAACAAAACTCGAACCAAAGGGGAACGATCGTGAACGACGCACAA
AAACGATCTCAAGAAGTCGAGGAGGAAGAAAACGAAGCTGAAGAACGTTC
GCTCCTTGTACAAAACCTCATCGATGAGCTCACGTTTAAAGTTGCAAGTC
TTGCCATGGACAGACACGCTGCCCCGACCTTGGAGAAGGTAGCACGCCTC
TGCACACGGAAGCAACTCGCACATCTTCTACATGGGTGTCTCGGCTACGC
AGCATGCCTTGCCAGTAATCGATATTCTTCTCATGTACTGCAAACCTTCC
TATCATTGACGGGGCCCATGCTGGAGGCTGAGTTGCTTGGTATCGGGGAG
GAAGAGGACAGGGATGAAGGACTCGACGACAAACCGCCTTTCAGCACAGG
ATCAGAGATCGATGAGGCTGCACCTGGAGAAGGCATATCATTGGCTGACA
CAGCCACTAAGCTTGCAGAGGAGCTGCGAGCCTCGTGGTTGTCGTTGATC
TTTGATTTGTGCGGGACGCACAGCATGCGTGCTTTTTTCTGCCTCCTAGC
AGGGATGCCCGCGGTGGCGGAAAAACGCGGCCGGCATGCCAAGCACAAGC
ACGGTATTGAGACTGCTGTAGCAGTAGGTTATCAGGGCATTGGTGCAGGG
CCCGGTGACGTACGAAGTAAAACTCAGGGGGAGACTGGAAACCTCCATTC
CACGCCCTTAGTCATGCACCGGGTGCCCGCCCGGCTCGCTGACATACTAG
GAGAGATGGTGACGGAATTGGCCAATATGGAGTTGCGGGATTTACATCAG
GCTCTTTGTGATCCCTACGCCAGTCCTGCCTTGGGTCTCCTTGTGCAGGC
GGTGGCTCGCAAGGAGAGCGCAGTCAGACAAGATTTCCACCTGGATACCG
ATGGCATCTTTTTTAAGCAATTGGTGGCGAAAGCCTTGTGTTTTAAGGAC
GCTGATAGGTGTGCCGAAGTTGTATATGCCATGGCCGGCGAGACTATGAG
TAGTCGCTTCCTTGAAGCGGTCTTGTGGCATACGGCGCCTACTCAGGTCG
CAGCTCGCATTTTCGAGGCGTGCATTCGGGGTCGGGTGATGGAATTTGCC
GAGGACAGTGTAGCCAATTTTGTCCTGCAAACGTGGTTGCAGCGGACAGA
GTCGCCTGAGCACTTGAAGGCGGCATTGGACGAATTGGCGCCGCGAGTCC
GACGGTTGGTGGAGACACGTCGGGCTGGTGTTTTGTGGCGGCTGGCGGGG
GCCTGCCTTCGTCTGAGGCATGGCCAGGAAGAGATGGTAGACGGCGTCGT
CTCTGGCTTGGGAGGAGCCGGTGGGGAGACGAAGAAGGAAGAGGGGACTA
ACAGCTCTCGGCTTGACATGGCTGTGCTGGCGTTACAGACGGGGTTGGAA
CTCGATGTGGGACAAGGCCATAGGGAAGGAGGGCATGGGACGGAGCATGA
CAGGCGATTGCACCTCAACGTGCCTGGCGCGCGACTTTTCGAATGTCTGA
TGCGTTTTCCCACTAGTTCGGGGAAACACAGGGGCAGTGGGTGGATAATA
TGCCGGGCAGTACTTGAGCTGCCACCTGAAACGTTGGTGGCTGTGGCGAC
GGATAATATCGGTAGCCGTACTTTGCTTGATCCGCTCCTAGGTGCGTCCT
CAGCAGGAACAGAGCTAGGGGCAGCGACCATAGAACGAAGGGAGAGAAGC
GAGGGTGGTGGTCGGACAGCAGAAAATCGGGGCGAAAAGAGCAAGAAGAG
GAAGACCTCAGATCCGCACAGAGATGAAATAAACTCGAGTCTGGCGGATC
GGCTCGCCCAGAGATTGCAGGGTCACTACGCGTCCCTGGCCGCACATCCT
GTTGGCTTCCACATTTTGACCAAGTGTTTTTCTTCGAGCGGATTGAGTTT
GGAATGGAAAAAGAATGTGGTCCAAGAGTTGATAGACGCCGAGAGTCGCC
TGGCCGGAGGCCATTTCGGTCGGCGGGCTTTGCGGGAGGTCGGGGTGTCG
CTATACCGAGTAAATCAAGCGAAATGGGAGGAGGCTCAGAAAGAAGGGGA
GAGGAAGAAAGAGGTTTTGGATGACCTCCTCGATATGCTTGAGCATGAGG
CTGAAGTGGCTGGAAAAGGGCGAGGGGCATCGCAAAGAAACGGGAAGATG
CACGGAGCGACGAAGAACAGAAAGGAGGACGTGGAAAAAACTTCCAAGAG
ACGGCGTGAAGATAATACAGAGCAACAGCAATTGGAGCCAGACTCACAGA
ACCACTCAGTATTTGACCTGCTGATGGGAGCGAGCAAATACATGGCGAAG
TCGAAGGAAAGGAGGGGGCCTGATGAGCAAGCCGAAGGCGCCGCTAGAGA
CAGCAAGAGTCTTGAGTTCGTTCTGGAGGCCACTAAAACCCCCTGCAAGT
CTGACACGAACATAGCTGTACCAAGCGAAAGCAAGAGCAAACGCGTCCAC
AAAAAACGACAGAGTGAAAGTGGTCGGTCGGAAAAGCAGGAGCGTGCGAC
GCGTCGACAGGGGAATCTGCAGCATGCAAAAAATGAGTCTTCAGCTCCGT
CGGCGACAAAATCTCTGTTCAAAAGCAGTCGACAAGATGGTGGCCTGAAG
AAAAATCATCTAGCAAACAAAACGGCGATTGAAAAGGCACAAGTCATCTT
GGGAAACCGGGCGATGATGAGCAAGAGGGAACTCTTCTCCGCTGTAGAAG
GTCTGGAACAAGAAATCAAGAAAGAAAAGCATGCTTCCGACAAGCAAGCA
GGCAGAAGACATGTTTGAATAGGGACTTGGAATGGACATCGAATAATCAT
TGGGGGAAAATAAATTCCAACTAGTTGTTGGGGAGATTTTGCTATGACTT
CTATACTGAAGAGAAATAGTAACGAAGAGAAGAAAAGCATCTCTTGAAAA
AAGTATTCGTGTCTCATGGATGACTCCTGTTCGATCGCCCTCGCGTACCG
TTTATGTGACCTTCAGAGCTATCATTGTGTTTCAGATATTGAAGTGTCCT
CGAGGCGTTTTGCCTCTCACTTATATATTTATGCTCTCATCATAGGTCGG
TCTAGGACAAAAAATAAAGATGATTGTGTTGTTC back to topCoding sequence (CDS) from alignment at CM002463.1:466225..469658- >rna4391 ID=rna4391|Name=rna4391|organism=Nannochloropsis gaditana|type=CDS|length=2937bp|location=Sequence derived from alignment at CM002463.1:466225..469658- (Nannochloropsis gaditana)
ATGGAGCCATCCTCCACAACCCAAGATCAGCAAATACAAGGCGATGGAAG
CACATTTGGTGAAGGTGGAGCAACTCTTCACGCTTATTCCCGGCCACGTC
GGCCAGAAAGCGAGACATTGACTTATTTGCGCTCACTTGAGCCTGTCATC
GACAAAAGCATCACCGCCCTCCTCCAACAAAACTCGAACCAAAGGGGAAC
GATCGTGAACGACGCACAAAAACGATCTCAAGAAGTCGAGGAGGAAGAAA
ACGAAGCTGAAGAACGTTCGCTCCTTGTACAAAACCTCATCGATGAGCTC
ACGTTTAAAGTTGCAAGTCTTGCCATGGACAGACACGCTGCCCCGACCTT
GGAGAAGGTAGCACGCCTCTGCACACGGAAGCAACTCGCACATCTTCTAC
ATGGGTGTCTCGGCTACGCAGCATGCCTTGCCAGTAATCGATATTCTTCT
CATGTACTGCAAACCTTCCTATCATTGACGGGGCCCATGCTGGAGGCTGA
GTTGCTTGGTATCGGGGAGGAAGAGGACAGGGATGAAGGACTCGACGACA
AACCGCCTTTCAGCACAGGATCAGAGATCGATGAGGCTGCACCTGGAGAA
GGCATATCATTGGCTGACACAGCCACTAAGCTTGCAGAGGAGCTGCGAGC
CTCGTGGTTGTCGTTGATCTTTGATTTGTGCGGGACGCACAGCATGCGTG
CTTTTTTCTGCCTCCTAGCAGGGATGCCCGCGGTGGCGGAAAAACGCGGC
CGGCATGCCAAGCACAAGCACGGTATTGAGACTGCTGTAGCAGTAGGTTA
TCAGGGCATTGGTGCAGGGCCCGGTGACGTACGAAGTAAAACTCAGGGGG
AGACTGGAAACCTCCATTCCACGCCCTTAGTCATGCACCGGGTGCCCGCC
CGGCTCGCTGACATACTAGGAGAGATGGTGACGGAATTGGCCAATATGGA
GTTGCGGGATTTACATCAGGCTCTTTGTGATCCCTACGCCAGTCCTGCCT
TGGGTCTCCTTGTGCAGGCGGTGGCTCGCAAGGAGAGCGCAGTCAGACAA
GATTTCCACCTGGATACCGATGGCATCTTTTTTAAGCAATTGGTGGCGAA
AGCCTTGTGTTTTAAGGACGCTGATAGGTGTGCCGAAGTTGTATATGCCA
TGGCCGGCGAGACTATGAGTAGTCGCTTCCTTGAAGCGGTCTTGTGGCAT
ACGGCGCCTACTCAGGTCGCAGCTCGCATTTTCGAGGCGTGCATTCGGGG
TCGGGTGATGGAATTTGCCGAGGACAGTGTAGCCAATTTTGTCCTGCAAA
CGTGGTTGCAGCGGACAGAGTCGCCTGAGCACTTGAAGGCGGCATTGGAC
GAATTGGCGCCGCGAGTCCGACGGTTGGTGGAGACACGTCGGGCTGGTGT
TTTGTGGCGGCTGGCGGGGGCCTGCCTTCGTCTGAGGCATGGCCAGGAAG
AGATGGTAGACGGCGTCGTCTCTGGCTTGGGAGGAGCCGGTGGGGAGACG
AAGAAGGAAGAGGGGACTAACAGCTCTCGGCTTGACATGGCTGTGCTGGC
GTTACAGACGGGGTTGGAACTCGATGTGGGACAAGGCCATAGGGAAGGAG
GGCATGGGACGGAGCATGACAGGCGATTGCACCTCAACGTGCCTGGCGCG
CGACTTTTCGAATGTCTGATGCGTTTTCCCACTAGTTCGGGGAAACACAG
GGGCAGTGGGTGGATAATATGCCGGGCAGTACTTGAGCTGCCACCTGAAA
CGTTGGTGGCTGTGGCGACGGATAATATCGGTAGCCGTACTTTGCTTGAT
CCGCTCCTAGGTGCGTCCTCAGCAGGAACAGAGCTAGGGGCAGCGACCAT
AGAACGAAGGGAGAGAAGCGAGGGTGGTGGTCGGACAGCAGAAAATCGGG
GCGAAAAGAGCAAGAAGAGGAAGACCTCAGATCCGCACAGAGATGAAATA
AACTCGAGTCTGGCGGATCGGCTCGCCCAGAGATTGCAGGGTCACTACGC
GTCCCTGGCCGCACATCCTGTTGGCTTCCACATTTTGACCAAGTGTTTTT
CTTCGAGCGGATTGAGTTTGGAATGGAAAAAGAATGTGGTCCAAGAGTTG
ATAGACGCCGAGAGTCGCCTGGCCGGAGGCCATTTCGGTCGGCGGGCTTT
GCGGGAGGTCGGGGTGTCGCTATACCGAGTAAATCAAGCGAAATGGGAGG
AGGCTCAGAAAGAAGGGGAGAGGAAGAAAGAGGTTTTGGATGACCTCCTC
GATATGCTTGAGCATGAGGCTGAAGTGGCTGGAAAAGGGCGAGGGGCATC
GCAAAGAAACGGGAAGATGCACGGAGCGACGAAGAACAGAAAGGAGGACG
TGGAAAAAACTTCCAAGAGACGGCGTGAAGATAATACAGAGCAACAGCAA
TTGGAGCCAGACTCACAGAACCACTCAGTATTTGACCTGCTGATGGGAGC
GAGCAAATACATGGCGAAGTCGAAGGAAAGGAGGGGGCCTGATGAGCAAG
CCGAAGGCGCCGCTAGAGACAGCAAGAGTCTTGAGTTCGTTCTGGAGGCC
ACTAAAACCCCCTGCAAGTCTGACACGAACATAGCTGTACCAAGCGAAAG
CAAGAGCAAACGCGTCCACAAAAAACGACAGAGTGAAAGTGGTCGGTCGG
AAAAGCAGGAGCGTGCGACGCGTCGACAGGGGAATCTGCAGCATGCAAAA
AATGAGTCTTCAGCTCCGTCGGCGACAAAATCTCTGTTCAAAAGCAGTCG
ACAAGATGGTGGCCTGAAGAAAAATCATCTAGCAAACAAAACGGCGATTG
AAAAGGCACAAGTCATCTTGGGAAACCGGGCGATGATGAGCAAGAGGGAA
CTCTTCTCCGCTGTAGAAGGTCTGGAACAAGAAATCAAGAAAGAAAAGCA
TGCTTCCGACAAGCAAGCAGGCAGAAGACATGTTTGA back to top
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