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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100078g22.6999.mrna |
| Orig protein id | gnl|cribi|Naga_100078g22.6999 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:346869..349559 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4347 ID=rna4347|Name=rna4347|organism=Nannochloropsis gaditana|type=mRNA|length=945bp
ATGTCTTCCCTATGCGATTTTTACCATCGTCGTCGCCGCCGGCGGGTTAC
TTGGCCGTTGCTAGCGGCTGCGGCCGCAGCTTCCTCGTCCAAAGTTGTAC
TGGCTGCCGCTGCCACAACCACGTCTCCTCCTCTTTCATCGCTCCCACCC
GCTGCCCGCCGTGGCAGTCGTCGAGTGCCGGACGCGCCAATAAAGCCTTC
GAGGACACAGGAGGGAAGAGAAGGGCACGCCCCCCAGGCCCTGGGAAGGA
GGTCTTCGCGACAGGAAAGCAAGCCTTTAGGTGGTACAGATGGTACGACA
CGAAGGGCAAACGATAATAATATAGACAATACGGAAGAAAAACGGGTGCA
GTTGCCCCAAGTATCGCTCCTGGACGAATACTTGCCCTTGCTCCTTGAAG
ACATTCAGGTCGTGGATCAAGAACTAGACCTTGAATTGCAGCAGATGTTC
GAAGACTTGTACGCCTCGCCCGACCTTCCATCCCCACGGCGCCTCTCATC
TCGGGAAGCCAAATCACAACGAAGGGGAATGGCATCTGCGTTCTCTGATG
TGGTGAGCGGGGTTGGACCGGGCGCGGTGCTGGGCAGCCTGCTGCACTTA
CTGCTCCTCTCACATCTGACGTCGGGTGAGGGGGAGCGGTCAATAGCTGG
GAAAGCGTTGGCGGAGGTGCAGGGCGGGATATGGGCCGTCATGGCCTCCG
TGTTGGGCGACGTGATCGCCTTGCCGGCTTTCAAGGAGGTGGGAGAGGCC
GGATGGGAAGAAAAAGGCCGGGGGGCAGGGCAGGAAAGGGGGCTTACCGA
CGAAGAAAGGGACGGTCTGTCTACGTTGGCCGCAGCTTTGAGAGAACAAC
AACAGAAGAAGCAGGAAGGGTATCTCAGGAGCCCGGATGCGGAGAGTGAC
GAGCAGGCGAGCGCGCTCTTTGGCCCCTCTGTTATTGACGGTTGA back to topprotein sequence of rna4347 >rna4347-protein ID=rna4347-protein|Name=rna4347|organism=Nannochloropsis gaditana|type=polypeptide|length=736bp
MPNERGCPSGLAGSSAMPQDQSGIPVNEVSPFSSNSSQPIEEMTPIRPQS
NSRPHYEQTGGLPGNDVQKPSLRPETENQQNLFYVDLTVRKGSRLETSQT
NVIDSSSSNRTTRHFPIYAAHTLKSTTRIFILAFLLPLVMERGPTLDSPG
LLQGHLFVREPLSIVYMCYLVIIAVFTPFWGALYDVLSAGSKSHALVFVF
LAASCVGPVVAFVLLSPPSPANRQHVSWTAVVAVGGGMIVAAETLTGFLL
ADLSHMHSRPYSDAAALLNGKASLVGVGLATLLVGAPNLILSMALGTNPQ
TTTRYACISTVLVNLTASLCIMFARLCFSWDGINMKRTQRRQQVVVSASS
SSRPRSGAGTSEGHETPQGDVRTPNFGMAACFRALRPGALACVVSLSPPF
IVRFLFVRMFYQGGIRCLSYLATTYILQSLDLKIDIACKAVVVAFATSLL
GMSLTLGYLSAQYSRVQKQQDVSRLRRASSASTASALGAAIAAARVEQDL
TPSFAEEFRARPDPLDAPELPPLGIALAVLIVACAAAPTDVADSTDPLSA
FSRDEGMLYSIAGIVGFCVGFISTYEKGILASTIWPNSSQQQTAMVTQVG
VGTFCGILTASSVVLEWLPTVLFAIVPSQALPSATWTLSLYLGLCLLLFA
LCMVWSHLKEKNRGAARRGRLSFSGAGSEANSRDQTEQTVSERVSGFLLR
SLPSHLSTIIESPGGQRERDSTCSTVMPASFSTGAS back to topmRNA from alignment at CM002463.1:346869..349559- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4347 ID=rna4347|Name=rna4347|organism=Nannochloropsis gaditana|type=mRNA|length=2691bp|location=Sequence derived from alignment at CM002463.1:346869..349559- (Nannochloropsis gaditana)
ACACGATACACTATCTCAAACAGCACTGTATGCCCAACGAAAGGGGTTGT
CCCTCCGGATTGGCCGGATCGTCTGCCATGCCTCAAGACCAAAGTGGCAT
ACCGGTCAATGAAGTTAGCCCCTTTTCGTCAAATTCTTCCCAGCCTATAG
AAGAGATGACTCCAATACGCCCACAAAGTAATTCTCGACCACACTATGAG
CAAACCGGCGGGCTTCCAGGCAACGACGTACAAAAGCCTTCTCTAAGGCC
AGAAACGGAGAACCAACAAAATCTTTTTTACGTTGATCTGACAGTGCGCA
AAGGCTCCCGTCTCGAAACCTCTCAAACAAATGTGATCGATAGTTCTTCC
TCTAACAGAACAACACGACATTTTCCCATATATGCGTAAGTTTGCATAAC
CGCCAAAAAACGCTGGGCCGTGAGGTATCTTTCAAAGAAACTCGATGGTC
TCTCACCTGACTTCTCAACCCTCACATTTGTCATATCAGAGCGCATACAC
TTAAGAGCACCACTCGTATTTTCATCCTTGCTTTCCTGCTGCCCTTAGTC
ATGGAACGAGGTCCCACGCTCGATAGTCCTGGCTTGCTTCAGGGTCACCT
CTTCGTACGAGAACCCCTAAGCATAGTTTACATGTGCTACTTGGTCATCA
TCGCTGTATTTACCCCGTTTTGGGGGGCCCTCTATGATGTTCTGAGCGCC
GGGAGCAAAAGTCATGCGTTGGTCTTTGTCTTTCTGGCGGCTTCGTGTGT
GGGCCCGGTCGTGGCTTTCGTTCTACTCTCGCCACCTTCTCCTGCAAACA
GGCAGCACGTGTCGTGGACCGCCGTGGTGGCTGTGGGGGGCGGGATGATT
GTTGCAGCCGAAACTTTGACGGGATTTCTTCTGGCAGATTTGAGCCACAT
GCACTCGCGACCTTACAGTGATGCCGCTGCCCTTCTGAACGGGAAGGCAA
GCTTGGTGGGCGTAGGCCTCGCCACCCTCCTTGTCGGAGCTCCTAATCTG
ATACTGTCCATGGCGCTGGGGACGAATCCACAAACCACTACGCGATACGC
ATGCATCTCGACTGTCCTGGTCAACCTGACCGCCAGTCTCTGTATTATGT
TTGCGCGATTATGTTTCTCGTGGGATGGAATAAATATGAAAAGAACGCAG
CGACGACAGCAAGTGGTGGTCAGCGCCTCCTCTTCGAGTCGACCCCGCTC
TGGAGCTGGCACCTCTGAAGGTCACGAAACCCCGCAAGGGGATGTGCGGA
CGCCTAATTTCGGCATGGCAGCCTGTTTTCGTGCTCTGCGCCCTGGCGCC
CTGGCCTGTGTCGTCTCTCTCAGCCCTCCCTTCATTGTGCGATTCCTGTT
CGTGCGCATGTTCTACCAGGGAGGCATTCGCTGCCTCTCGTATCTTGCCA
CTACCTACATTCTACAAAGCTTAGACTTGAAAATAGACATCGCATGCAAG
GCGGTTGTTGTAGCTTTTGCCACCTCCCTCCTCGGTATGAGCTTGACGCT
AGGGTATCTTTCCGCTCAATACTCCCGAGTACAGAAGCAGCAGGACGTCT
CTCGGCTCCGTCGTGCGTCCTCCGCCTCGACAGCTTCGGCGCTTGGCGCA
GCGATTGCAGCGGCACGTGTGGAACAGGACCTCACGCCGTCATTTGCTGA
AGAGTTCCGCGCACGCCCTGACCCGTTGGACGCACCCGAACTCCCTCCAC
TAGGTATCGCGTTGGCGGTTTTGATTGTCGCTTGTGCGGCCGCCCCCACA
GACGTAGCAGATTCCACAGATCCTTTGAGCGCCTTTTCGCGGGATGAGGG
GATGCTTTATTCCATCGCCGGCATTGTTGGTTTCTGCGTGGGGTTTATAT
CTACCTACGAAAAAGGCATCTTAGCCAGCACAATATGGCCAAACAGCTCC
CAACAACAGACTGCGATGGTGACACAAGTAGGGGTGGGCACCTTCTGCGG
GATATTGACTGCATCAAGCGTCGTCCTCGAGTGGCTCCCCACAGTCTTAT
TCGCGATTGTCCCCTCACAAGCTCTTCCCTCGGCGACGTGGACGTTGTCG
CTCTACTTGGGCCTCTGCCTACTCTTGTTCGCCCTCTGCATGGTGTGGTC
GCACCTCAAAGAGAAGAATCGGGGCGCAGCAAGAAGGGGTAGACTATCTT
TCTCCGGTGCAGGATCGGAGGCGAACTCGAGAGATCAAACCGAGCAGACT
GTAAGCGAGCGGGTGTCCGGCTTCCTCTTGCGGTCTCTGCCCTCCCACCT
GTCCACCATCATCGAGTCGCCAGGGGGACAGAGGGAACGGGACAGCACGT
GCTCGACAGTCATGCCTGCGTCCTTCTCTACGGGTGCGTCGTGAGAATCA
TTAAAATTTAAGGGTGCTGGGGGGGGAAGATGCTGGGATGACGGAGACAG
GGGAAGGACAGTAATCTGAGTGGGGGTTATAATGTTTGTCGTTTGAGCAT
GATGATTCTGGTAGAATGCATGACAGAGGGGACTCAATGAAATGTACAGA
ATGATGCATAGTAAAAGCCAATGCGTGTGGGCGGGAGTCATGCAGTAGCC
GCTTCTGAGTCCTGATCGCTCAATCAGTCGTCGCTAGAGCTCGACCACAA
TTGACAGAAGTGCCGGGGAAGGACCTTCAAATATAACAAAGAATATGCCA
AACGAAAGCAATTAAAGTCGTTACCAAGTTATGAAACGCGC back to topCoding sequence (CDS) from alignment at CM002463.1:346869..349559- >rna4347 ID=rna4347|Name=rna4347|organism=Nannochloropsis gaditana|type=CDS|length=4422bp|location=Sequence derived from alignment at CM002463.1:346869..349559- (Nannochloropsis gaditana)
AGCGCATACACTTAAGAGCACCACTCGTATTTTCATCCTTGCTTTCCTGC
TGCCCTTAGTCATGGAACGAGGTCCCACGCTCGATAGTCCTGGCTTGCTT
CAGGGTCACCTCTTCGTACGAGAACCCCTAAGCATAGTTTACATGTGCTA
CTTGGTCATCATCGCTGTATTTACCCCGTTTTGGGGGGCCCTCTATGATG
TTCTGAGCGCCGGGAGCAAAAGTCATGCGTTGGTCTTTGTCTTTCTGGCG
GCTTCGTGTGTGGGCCCGGTCGTGGCTTTCGTTCTACTCTCGCCACCTTC
TCCTGCAAACAGGCAGCACGTGTCGTGGACCGCCGTGGTGGCTGTGGGGG
GCGGGATGATTGTTGCAGCCGAAACTTTGACGGGATTTCTTCTGGCAGAT
TTGAGCCACATGCACTCGCGACCTTACAGTGATGCCGCTGCCCTTCTGAA
CGGGAAGGCAAGCTTGGTGGGCGTAGGCCTCGCCACCCTCCTTGTCGGAG
CTCCTAATCTGATACTGTCCATGGCGCTGGGGACGAATCCACAAACCACT
ACGCGATACGCATGCATCTCGACTGTCCTGGTCAACCTGACCGCCAGTCT
CTGTATTATGTTTGCGCGATTATGTTTCTCGTGGGATGGAATAAATATGA
AAAGAACGCAGCGACGACAGCAAGTGGTGGTCAGCGCCTCCTCTTCGAGT
CGACCCCGCTCTGGAGCTGGCACCTCTGAAGGTCACGAAACCCCGCAAGG
GGATGTGCGGACGCCTAATTTCGGCATGGCAGCCTGTTTTCGTGCTCTGC
GCCCTGGCGCCCTGGCCTGTGTCGTCTCTCTCAGCCCTCCCTTCATTGTG
CGATTCCTGTTCGTGCGCATGTTCTACCAGGGAGGCATTCGCTGCCTCTC
GTATCTTGCCACTACCTACATTCTACAAAGCTTAGACTTGAAAATAGACA
TCGCATGCAAGGCGGTTGTTGTAGCTTTTGCCACCTCCCTCCTCGGTATG
AGCTTGACGCTAGGGTATCTTTCCGCTCAATACTCCCGAGTACAGAAGCA
GCAGGACGTCTCTCGGCTCCGTCGTGCGTCCTCCGCCTCGACAGCTTCGG
CGCTTGGCGCAGCGATTGCAGCGGCACGTGTGGAACAGGACCTCACGCCG
TCATTTGCTGAAGAGTTCCGCGCACGCCCTGACCCGTTGGACGCACCCGA
ACTCCCTCCACTAGGTATCGCGTTGGCGGTTTTGATTGTCGCTTGTGCGG
CCGCCCCCACAGACGTAGCAGATTCCACAGATCCTTTGAGCGCCTTTTCG
CGGGATGAGGGGATGCTTTATTCCATCGCCGGCATTGTTGGTTTCTGCGT
GGGGTTTATATCTACCTACGAAAAAGGCATCTTAGCCAGCACAATATGGC
CAAACAGCTCCCAACAACAGACTGCGATGGTGACACAAGTAGGGGTGGGC
ACCTTCTGCGGGATATTGACTGCATCAAGCGTCGTCCTCGAGTGGCTCCC
CACAGTCTTATTCGCGATTGTCCCCTCACAAGCTCTTCCCTCGGCGACGT
GGACGTTGTCGCTCTACTTGGGCCTCTGCCTACTCTTGTTCGCCCTCTGC
ATGGTGTGGTCGCACCTCAAAGAGAAGAATCGGGGCGCAGCAAGAAGGGG
TAGACTATCTTTCTCCGGTGCAGGATCGGAGGCGAACTCGAGAGATCAAA
CCGAGCAGACTGTAAGCGAGCGGGTGTCCGGCTTCCTCTTGCGGTCTCTG
CCCTCCCACCTGTCCACCATCATCGAGTCGCCAGGGGGACAGAGGGAACG
GGACAGCACGTGCTCGACAGTCATGCCTGCGTCCTTCTCTACGGGTGCGT
CGTGAATGCCCAACGAAAGGGGTTGTCCCTCCGGATTGGCCGGATCGTCT
GCCATGCCTCAAGACCAAAGTGGCATACCGGTCAATGAAGTTAGCCCCTT
TTCGTCAAATTCTTCCCAGCCTATAGAAGAGATGACTCCAATACGCCCAC
AAAGTAATTCTCGACCACACTATGAGCAAACCGGCGGGCTTCCAGGCAAC
GACGTACAAAAGCCTTCTCTAAGGCCAGAAACGGAGAACCAACAAAATCT
TTTTTACGTTGATCTGACAGTGCGCAAAGGCTCCCGTCTCGAAACCTCTC
AAACAAATGTGATCGATAGTTCTTCCTCTAACAGAACAACACGACATTTT
CCCATATATGCAGCGCATACACTTAAGAGCACCACTCGTATTTTCATCCT
TGCTTTCCTGCTGCCCTTAGTCATGGAACGAGGTCCCACGCTCGATAGTC
CTGGCTTGCTTCAGGGTCACCTCTTCGTACGAGAACCCCTAAGCATAGTT
TACATGTGCTACTTGGTCATCATCGCTGTATTTACCCCGTTTTGGGGGGC
CCTCTATGATGTTCTGAGCGCCGGGAGCAAAAGTCATGCGTTGGTCTTTG
TCTTTCTGGCGGCTTCGTGTGTGGGCCCGGTCGTGGCTTTCGTTCTACTC
TCGCCACCTTCTCCTGCAAACAGGCAGCACGTGTCGTGGACCGCCGTGGT
GGCTGTGGGGGGCGGGATGATTGTTGCAGCCGAAACTTTGACGGGATTTC
TTCTGGCAGATTTGAGCCACATGCACTCGCGACCTTACAGTGATGCCGCT
GCCCTTCTGAACGGGAAGGCAAGCTTGGTGGGCGTAGGCCTCGCCACCCT
CCTTGTCGGAGCTCCTAATCTGATACTGTCCATGGCGCTGGGGACGAATC
CACAAACCACTACGCGATACGCATGCATCTCGACTGTCCTGGTCAACCTG
ACCGCCAGTCTCTGTATTATGTTTGCGCGATTATGTTTCTCGTGGGATGG
AATAAATATGAAAAGAACGCAGCGACGACAGCAAGTGGTGGTCAGCGCCT
CCTCTTCGAGTCGACCCCGCTCTGGAGCTGGCACCTCTGAAGGTCACGAA
ACCCCGCAAGGGGATGTGCGGACGCCTAATTTCGGCATGGCAGCCTGTTT
TCGTGCTCTGCGCCCTGGCGCCCTGGCCTGTGTCGTCTCTCTCAGCCCTC
CCTTCATTGTGCGATTCCTGTTCGTGCGCATGTTCTACCAGGGAGGCATT
CGCTGCCTCTCGTATCTTGCCACTACCTACATTCTACAAAGCTTAGACTT
GAAAATAGACATCGCATGCAAGGCGGTTGTTGTAGCTTTTGCCACCTCCC
TCCTCGGTATGAGCTTGACGCTAGGGTATCTTTCCGCTCAATACTCCCGA
GTACAGAAGCAGCAGGACGTCTCTCGGCTCCGTCGTGCGTCCTCCGCCTC
GACAGCTTCGGCGCTTGGCGCAGCGATTGCAGCGGCACGTGTGGAACAGG
ACCTCACGCCGTCATTTGCTGAAGAGTTCCGCGCACGCCCTGACCCGTTG
GACGCACCCGAACTCCCTCCACTAGGTATCGCGTTGGCGGTTTTGATTGT
CGCTTGTGCGGCCGCCCCCACAGACGTAGCAGATTCCACAGATCCTTTGA
GCGCCTTTTCGCGGGATGAGGGGATGCTTTATTCCATCGCCGGCATTGTT
GGTTTCTGCGTGGGGTTTATATCTACCTACGAAAAAGGCATCTTAGCCAG
CACAATATGGCCAAACAGCTCCCAACAACAGACTGCGATGGTGACACAAG
TAGGGGTGGGCACCTTCTGCGGGATATTGACTGCATCAAGCGTCGTCCTC
GAGTGGCTCCCCACAGTCTTATTCGCGATTGTCCCCTCACAAGCTCTTCC
CTCGGCGACGTGGACGTTGTCGCTCTACTTGGGCCTCTGCCTACTCTTGT
TCGCCCTCTGCATGGTGTGGTCGCACCTCAAAGAGAAGAATCGGGGCGCA
GCAAGAAGGGGTAGACTATCTTTCTCCGGTGCAGGATCGGAGGCGAACTC
GAGAGATCAAACCGAGCAGACTGTAAGCGAGCGGGTGTCCGGCTTCCTCT
TGCGGTCTCTGCCCTCCCACCTGTCCACCATCATCGAGTCGCCAGGGGGA
CAGAGGGAACGGGACAGCACGTGCTCGACAGTCATGCCTGCGTCCTTCTC
TACGGGTGCGTCGTGAATGCCCAACGAAAGGGGTTGTCCCTCCGGATTGG
CCGGATCGTCTGCCATGCCTCAAGACCAAAGTGGCATACCGGTCAATGAA
GTTAGCCCCTTTTCGTCAAATTCTTCCCAGCCTATAGAAGAGATGACTCC
AATACGCCCACAAAGTAATTCTCGACCACACTATGAGCAAACCGGCGGGC
TTCCAGGCAACGACGTACAAAAGCCTTCTCTAAGGCCAGAAACGGAGAAC
CAACAAAATCTTTTTTACGTTGATCTGACAGTGCGCAAAGGCTCCCGTCT
CGAAACCTCTCAAACAAATGTGATCGATAGTTCTTCCTCTAACAGAACAA
CACGACATTTTCCCATATATGC back to top
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