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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100078g23.7012.mrna |
| Orig protein id | gnl|cribi|Naga_100078g23.7012 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:344239..346572 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4346 ID=rna4346|Name=rna4346|organism=Nannochloropsis gaditana|type=mRNA|length=1728bp
CGTGCTCGGGTTCAACATGGGCTAACAGCACATAACTTACTTTTCTGCTT
GCTGATTCATCACTCATTATTGCTTTATCGTCCACGAGAGGGAATGGCGA
CATTGTTACGTGTCCTGATACTTGAAGCCTTTACTGTTCCATTCTCACCA
GATAGCCGATAGCACAGTTATTGTCCATAGTTGATCTTCCTGCATGACTT
TTAAAGACCTGGCAATTTTTGAGCTTGTAGAGGTTTAATTGCAACCTAGT
CATCCGTGCGTGGAGGAAAACTTGTCCTTTGAACACCGTCCCCCCGTAGT
CTGAATTTCCCTACCTTCCTTCCTCCACCTTCGAAGCTTCAGACACTTTC
ACAACGTTTGTCACCTGAAAACAAGCTATCCTCCATGGCTAAGCGGGCTT
CATCTGCTGCTACCGAACTGGTACAGCCCAAGGGACCGTGCAATGCGTAC
ATGTGGTTCAGTAATGATCCGAAGACGAAGGAACGGGTGAAAGAAACGCT
TCCCAAAGAACACACGAACAAAGACATTCTATCCAAATGCGGGGAGATGT
GGCGGACCATGAATGATCAGGACAAGGAACCATATGCAGCACAGGCTGAG
AAGGACAAAGCTCGCTTCGAAAAAGAAATGGATGCCTTTATCAAGGCCGG
CGGCTCGAAAAAAGCGCGGAAGGGTGGCAGCGGAGGCAGCAAGGGCAAGA
CTGCTAAGCCCTCCCTCCCTTCCCGCACCACCATTTCTGATACTAAGAAA
CAAGAGAAAAAGGAAGGGAAAGGGGAGGAGGCCAGGGAGAAAAAGGGAAA
CGGAGGCCAAGGAGCGACGAAACCGAAGGCGCTTGATTTCGCATTTGAAC
ATTTTATGGAGGCTGAGTTGAAGGCGGAAAAGCCCGAACTGAAGGGTAAA
AGTGAGAAAGAAAAACAAATCTTTTTGAAAAAGAAATGGGACGAAATGGA
CGAGAGTCAAAAAAAGGGTTGGACGTCCGCGGCCCCTGGAAGTGAGAACA
AGGACGCCCTCGTTGCCAAAGGCGCGAAAGGCGTTCCCATGCCAGCGTCG
CCCGCGACCACGGCGCAGCCAGAAGGGTCCGAAGAAGAGGTGGAGAAGGA
AAGAGGAAAGGAGGACGGCGAGGATGAGATAGAGATGGAAGAGGAAGCAG
GAGAGGGGGCGGGGAATGAGACCGAAGACGCCTGAAGACGCGCAACACAG
CGCTGTATAAGTGATATATGCGCTCTGAAGATATGTGTATGTTTCAGAAG
TGAGCTCAAAAAGCGAAAAAATCGAATAAAAAGACGCTTGGCACGGACCG
GCTATGACGAGAGCATGAATGTCACGGGGTAGGCGAAATCAACCTTCGGG
TGTCGAAGCCGATGTCTTTCGAGCATATTTTCAAATTGCGCCGTTTAAAA
CAAGAAGCAGCTGTGAAGCTTACAACGAGTGGGCTCGAGGAAGAATGGAT
ATAACGAGGACAATACACCGACACGTAAGAAGCCAAGAATGACTACCTTA
CTAGTACAATACCGAACTAAAGATGAAAAAAAGGGGGAATAAAACCTTGT
TTTACGCCAAAGACATCCATGTGCTGCTCCTCTTAAGTTAAAGACAAAGA
CATCCATGTGCTGCTCCTCTTAAGTTCCCTTTTCAGGCAAAGGGAATTTT
TCAGCATGCAGCATACGCTAGTGAGTCGAGATACTTTGTTCCCAGAGACA
TCTAGTATGTGAGGAGAACAGGGGCTGC back to topprotein sequence of rna4346 >rna4346-protein ID=rna4346-protein|Name=rna4346|organism=Nannochloropsis gaditana|type=polypeptide|length=314bp
MSSLCDFYHRRRRRRVTWPLLAAAAAASSSKVVLAAAATTTSPPLSSLPP
AARRGSRRVPDAPIKPSRTQEGREGHAPQALGRRSSRQESKPLGGTDGTT
RRANDNNIDNTEEKRVQLPQVSLLDEYLPLLLEDIQVVDQELDLELQQMF
EDLYASPDLPSPRRLSSREAKSQRRGMASAFSDVVSGVGPGAVLGSLLHL
LLLSHLTSGEGERSIAGKALAEVQGGIWAVMASVLGDVIALPAFKEVGEA
GWEEKGRGAGQERGLTDEERDGLSTLAAALREQQQKKQEGYLRSPDAESD
EQASALFGPSVIDG back to topmRNA from alignment at CM002463.1:344239..346572+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4346 ID=rna4346|Name=rna4346|organism=Nannochloropsis gaditana|type=mRNA|length=2334bp|location=Sequence derived from alignment at CM002463.1:344239..346572+ (Nannochloropsis gaditana)
ATGTCTTCCCTATGCGATTTTTACCATCGTCGTCGCCGCCGGCGGGTTAC
TTGGCCGTTGCTAGCGGCTGCGGCCgcagcttcctcgtccaaaGTTGTAC
tggctgccgctgccacaaccacgtctcctcctctttcatcgcTCCCACCC
GCTGCCCGCCGTGGCAGTCGTCGAGTGCCGGACGCGCCAATAAAGCCTTC
GAGGacacaggagggaagagaagggcacgccccccaggccctgggaagga
ggtctTCGCGACAGGAAAGCAAGCCTTTAGGTGGTACAGATGGTACGACA
CGAAGGGCAAACGATAATAATATAGACAATACGGAAGAAAAACGGGTGCA
GTTGCCCCAAGTATCGCTCCTGGACGAATACTTGCCCTTGCTCCTTGAAG
ACATTCAGGTCGTGGATCAAGAACTAGACCTTGAATTGCAGCAGATGTTC
GAAGACTTGTACGCCTCGCCCGaccttccatccccacgGCGCCTCTCATC
TCGGGAAGCCAAATCACAACGAAGGGGAATGGCATCTGCGTTCTCTGATG
GTaaggcaagaagaggaggcagggggaaagggccggGGACCGGGGTCAGA
CGGGGAGGTCGCGGCCTGAGCGTGGGGCCTCCGAGCCTtggaaatgagga
ggagcggcaagCATTaccccccctcgtcccagACTGTGACATGctagagg
ggaaggggcagcatctggaggttggggagggagagagacggcTGGAGggt
gcaaggaggaggggggttgcCATCTCGGCACAAGCCATCGGGCGCCTCCG
ACCTGtcgcgagggaggacaagggacggaagtgcggagggagggaggagg
aagaagaggaagaggcggctgCCGACGGCGGTCGGAGACGACGACCTCGG
GGCAAGAAACCGACGGGCAAGAAGGCGctcagggaagggggggcaggagc
aggccagggccagggggggggagtgaggaggccAAAAAGCTCGACAACAA
GGCCGACGTTTCCCTCCCGGACTGCGACCGGCAAAGCGCTGTCATCCAAG
CCCCGGGCCAAGCCGGGCCTGTCCCTCGACCCATCCCCCGGCGCGTCTTC
CCAGGGGcccaaggggaaaaaagcgcGAACCAGGCAGCGACGGCAGCTGC
TTCGCCTAGACCGACCACAGCACCGGCTCGCAGGGTCCAGGGTACCGTTC
CCGCCCACGGCCTGGGCCATGGCGGGCGCCTCACTTTCCGGGCTCGGGTG
GGCCTGCCTGGCCGTCCGGCAGATTCAAGGGGCGGGCCTCGCCAGCCACT
ACACTTACCTATTGAACCCCACACAAGCCGTTTTCAGCCTCGTCCTtggc
cccaccctcctcttcatccagGCTGGGAAGgaccttctttccccctcgcc
ctcccagcgcccgcccctcgtcctccaagtcctcctccccctcgccctcc
ttttcgccGCCACGGGCACGATCTTCTTGGCAAGGACCGGCCCCCCTGCG
GTCATTGCGGTCGTCCTCGCTGCCGCCTGCCTCATCCAGAACGTGCCACA
TACGCAGCCACCGGTCGGGCGGCCCGATGGGGCGAGGAGCGACCTCGACG
CGGGAAAGTGGCGTCGATCCCTCCTCAGCCTGATGGCTTCGGGGGCGCTC
GCCGCACTCGTGGGGGTGGGTTTGCCACTGAGCATGGCCGAGccgggccg
cctccttcgcctctcgcCCCCCGTGTCTTCCTCGGGACCTGTCTGGAGCG
TCCGGTTGGGGGCGTTGACGGCGGCGGTGTGGTTGAGTCAGATGGCCGTG
ACGACCTTCCGGGACGCCCAAGCCCGCCAGGAggtgtggggggaggaaga
ggaagaggaggaggtgggagggcagggacgaTTGACGCGCACTGGGAGGC
AAGTGCGAGCGTTGGGCGCCTGCTCGGCCATGGCGCTAGTGGTGAGCGGG
GTTGGACCGGGCGCGGTGCTGGGCAGCCTGCTGCACTTACTGCTCCTCTC
ACATCTGACGTCgggtgagggggagcggTCAATAGCTGGGAAAGCGTTGG
CGGAGGTGCAGGGCGGGATATGGGCCGTCATGGCCTCCGTGTTGGGCGAC
GTGATCGCCTTGCCGGCTttcaaggaggtgggagaggccggatgggaaga
aaaaggccggggggcagggcaggaaagggggctTACCgacgaagaaaggg
acggtCTGTCTACGTTGGCCGCAGCTTTGAGAGAACAACAAcagaagaag
caggaagggTATCTCAGGAGCCCGGATGCGGAGAGTGACGAGCAGGCGAG
CGCGCTCTTTGGCCCCTCTGTTATTGACGGTTGA back to topCoding sequence (CDS) from alignment at CM002463.1:344239..346572+ >rna4346 ID=rna4346|Name=rna4346|organism=Nannochloropsis gaditana|type=CDS|length=1890bp|location=Sequence derived from alignment at CM002463.1:344239..346572+ (Nannochloropsis gaditana)
ATGTCTTCCCTATGCGATTTTTACCATCGTCGTCGCCGCCGGCGGGTTAC
TTGGCCGTTGCTAGCGGCTGCGGCCgcagcttcctcgtccaaaGTTGTAC
tggctgccgctgccacaaccacgtctcctcctctttcatcgcTCCCACCC
GCTGCCCGCCGTGGCAGTCGTCGAGTGCCGGACGCGCCAATAAAGCCTTC
GAGGacacaggagggaagagaagggcacgccccccaggccctgggaagga
ggtctTCGCGACAGGAAAGCAAGCCTTTAGGTGGTACAGATGGTACGACA
CGAAGGGCAAACGATAATAATATAGACAATACGGAAGAAAAACGGGTGCA
GTTGCCCCAAGTATCGCTCCTGGACGAATACTTGCCCTTGCTCCTTGAAG
ACATTCAGGTCGTGGATCAAGAACTAGACCTTGAATTGCAGCAGATGTTC
GAAGACTTGTACGCCTCGCCCGaccttccatccccacgGCGCCTCTCATC
TCGGGAAGCCAAATCACAACGAAGGGGAATGGCATCTGCGTTCTCTGATG
TGGTGAGCGGGGTTGGACCGGGCGCGGTGCTGGGCAGCCTGCTGCACTTA
CTGCTCCTCTCACATCTGACGTCgggtgagggggagcggTCAATAGCTGG
GAAAGCGTTGGCGGAGGTGCAGGGCGGGATATGGGCCGTCATGGCCTCCG
TGTTGGGCGACGTGATCGCCTTGCCGGCTttcaaggaggtgggagaggcc
ggatgggaagaaaaaggccggggggcagggcaggaaagggggctTACCga
cgaagaaagggacggtCTGTCTACGTTGGCCGCAGCTTTGAGAGAACAAC
AAcagaagaagcaggaagggTATCTCAGGAGCCCGGATGCGGAGAGTGAC
GAGCAGGCGAGCGCGCTCTTTGGCCCCTCTGTTATTGACGGTTGAATGTC
TTCCCTATGCGATTTTTACCATCGTCGTCGCCGCCGGCGGGTTACTTGGC
CGTTGCTAGCGGCTGCGGCCgcagcttcctcgtccaaaGTTGTACtggct
gccgctgccacaaccacgtctcctcctctttcatcgcTCCCACCCGCTGC
CCGCCGTGGCAGTCGTCGAGTGCCGGACGCGCCAATAAAGCCTTCGAGGa
cacaggagggaagagaagggcacgccccccaggccctgggaaggaggtct
TCGCGACAGGAAAGCAAGCCTTTAGGTGGTACAGATGGTACGACACGAAG
GGCAAACGATAATAATATAGACAATACGGAAGAAAAACGGGTGCAGTTGC
CCCAAGTATCGCTCCTGGACGAATACTTGCCCTTGCTCCTTGAAGACATT
CAGGTCGTGGATCAAGAACTAGACCTTGAATTGCAGCAGATGTTCGAAGA
CTTGTACGCCTCGCCCGaccttccatccccacgGCGCCTCTCATCTCGGG
AAGCCAAATCACAACGAAGGGGAATGGCATCTGCGTTCTCTGATGTGGTG
AGCGGGGTTGGACCGGGCGCGGTGCTGGGCAGCCTGCTGCACTTACTGCT
CCTCTCACATCTGACGTCgggtgagggggagcggTCAATAGCTGGGAAAG
CGTTGGCGGAGGTGCAGGGCGGGATATGGGCCGTCATGGCCTCCGTGTTG
GGCGACGTGATCGCCTTGCCGGCTttcaaggaggtgggagaggccggatg
ggaagaaaaaggccggggggcagggcaggaaagggggctTACCgacgaag
aaagggacggtCTGTCTACGTTGGCCGCAGCTTTGAGAGAACAACAAcag
aagaagcaggaagggTATCTCAGGAGCCCGGATGCGGAGAGTGACGAGCA
GGCGAGCGCGCTCTTTGGCCCCTCTGTTATTGACGGTTGA back to top
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