rna4344, rna4344 (mRNA) Nannochloropsis gaditana

Overview
Namerna4344
Unique Namerna4344
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length772
Alignment locationCM002463.1:340382..341156 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100078g25.7000.mrna
Orig protein idgnl|cribi|Naga_100078g25.7000
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:340382..341156 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100078g25gene4188Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4344rna4344-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26325.1cds4334Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4344 ID=rna4344|Name=rna4344|organism=Nannochloropsis gaditana|type=mRNA|length=772bp
GTCTTCAGCAGGAGGGGCTTCAGGCTCGACGGGAGGATCTGCTGCTGCTG
CGTCTTCAGCAGGAGGGGCTTCAGGCTCGGCGGGAGGACCTGCTGCTGCT
GCGTCTTCAGCAGGAGGGGCTTCAGGCTCGGCGGGAGGATCTGCTGCGTC
TTCAGCAGGAGGGGCTTCAGGCTCGGCGGGAGGATCTGCTGCTGCTGCAT
CTTCAGCAGGAGGGGCTTCAGGCTCGGCGGGAGGATCTGCTGCTGCTGCA
TCTTCAGCAGGAGGGGCTTCAGGCTCGGCGGGAGGATCTGCTGCTGCTGC
ATCTTCAGCAGGAGGGGCTTCAGGCTCGGCGGGAAGATCTGCTGCGTCTT
CAGCAGGAGGGGCTTCAGGCTCGGCGGCATTATCGGCCTCTTTTGGGACT
TCGCCCTCCTCCGCTGGCGAAATCATATGACAGTCGATTTGTGTGGTGAA
AGGACCCACAGGCACTGGGAGGGAGATCAAGTGGGGAATAATCTGTGCGC
GCAGGGACCCGTGAGCTTTGATTTGCGTGGTTAGACCATTCCCGACGCAG
TCCTCCCCAATCTGAGAGATCTCCGATGCGTCCGTGTGAATCTCTGCCTT
TAGCTGAAAGTTTCTGGACCTATGGGGTGGTACAGCGACAATTTTCTCGT
GCGAAGCCGTGCCAACGTAGTGGCCTTGAAAATCTGTGCGTGCATAGATT
TGATTGTGACATGAGTGCCGGGGGAGAGTGAAGACGGACCAATCGTGCTA
CACAAGGCCAAAAAGAGAAAGA
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protein sequence of rna4344

>rna4344-protein ID=rna4344-protein|Name=rna4344|organism=Nannochloropsis gaditana|type=polypeptide|length=170bp
MPLDLISPLERGQSDHQPSSSSSSSSSSGTSSSGDSGSGKSSSSSGVSSS
YGSSFYDGTESEPTTKGSWDSDISTYPTTPFHKSFCCKCLGWTLAILLVP
SIVVGILVYKRVLWFTMPTITYEKGSSLRISTLDGPHSATDYNVAINVKV
NNPNNFPLRFSDVAMQLTGR
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mRNA from alignment at CM002463.1:340382..341156-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4344 ID=rna4344|Name=rna4344|organism=Nannochloropsis gaditana|type=mRNA|length=775bp|location=Sequence derived from alignment at CM002463.1:340382..341156- (Nannochloropsis gaditana)
ATGCCCCTCGATTTGATCTCGCCATTGGAAAGAGGGCAGTCTGACCATCA
GCCATCTTCTTCAAGCTCTTCATCATCGTCCTCAGGGACGTCATCGTCGG
GCGACAGCGGCAGTGGCAAATCTAGTAGCTCGAGTGGGGTTTCGTCTTCG
TACGGGTCGTCTTTCTACGATGGGACAGAGTCAGAACCTACGACGAAAGG
AAGCTGGGATTCTGACATCTCTACGTATCCTACGACGCCGTTTCATAAAT
CTTTTTGTTGCAAATGCCTGGGCTGGACGCTGGCTATTCTGCTCGTGCCA
AGCATAGTAGTTGGGATTCTTGTATACAAACGTGTGCTTTGGTTTACAAT
GCCAACAATAACCTATGAAAAAGGCTCTTCTCTGCGCATCTCGACGTTAG
ATGGTCCACACTCGGCAACAGATTACAACGTGGTATGTAATGGGGGTGCT
ACAGATAGCGGGACTGAAATCGGAAGTACATATTACAATTTACACGGAGA
GAAAGCTAGTGCTCGAAGTAAAAGGAAAACCAAATCGGTAGAGTGGAAGC
GGCGTGAGAGAGATGTCGCACGTGTGAAGTGGCGGTGTTCTAACACAATT
GAAGATCCATGTGCGTAGGGCGCCAAAAGTCAGACGCCTACACCCATCTC
TTACCTCAACCCTTCCGTCCATGCCACACGTCTTTCTTACGCAGGCCATA
AATGTGAAGGTGAATAATCCCAACAACTTTCCTCTCCGATTTAGCGATGT
AGCTATGCAGTTGACCGGTAGGTAG
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Coding sequence (CDS) from alignment at CM002463.1:340382..341156-

>rna4344 ID=rna4344|Name=rna4344|organism=Nannochloropsis gaditana|type=CDS|length=1026bp|location=Sequence derived from alignment at CM002463.1:340382..341156- (Nannochloropsis gaditana)
GCCATAAATGTGAAGGTGAATAATCCCAACAACTTTCCTCTCCGATTTAG
CGATGTAGCTATGCAGTTGACCGGTAGGTAGATGCCCCTCGATTTGATCT
CGCCATTGGAAAGAGGGCAGTCTGACCATCAGCCATCTTCTTCAAGCTCT
TCATCATCGTCCTCAGGGACGTCATCGTCGGGCGACAGCGGCAGTGGCAA
ATCTAGTAGCTCGAGTGGGGTTTCGTCTTCGTACGGGTCGTCTTTCTACG
ATGGGACAGAGTCAGAACCTACGACGAAAGGAAGCTGGGATTCTGACATC
TCTACGTATCCTACGACGCCGTTTCATAAATCTTTTTGTTGCAAATGCCT
GGGCTGGACGCTGGCTATTCTGCTCGTGCCAAGCATAGTAGTTGGGATTC
TTGTATACAAACGTGTGCTTTGGTTTACAATGCCAACAATAACCTATGAA
AAAGGCTCTTCTCTGCGCATCTCGACGTTAGATGGTCCACACTCGGCAAC
AGATTACAACGTGGCCATAAATGTGAAGGTGAATAATCCCAACAACTTTC
CTCTCCGATTTAGCGATGTAGCTATGCAGTTGACCGGTAGGTAGATGCCC
CTCGATTTGATCTCGCCATTGGAAAGAGGGCAGTCTGACCATCAGCCATC
TTCTTCAAGCTCTTCATCATCGTCCTCAGGGACGTCATCGTCGGGCGACA
GCGGCAGTGGCAAATCTAGTAGCTCGAGTGGGGTTTCGTCTTCGTACGGG
TCGTCTTTCTACGATGGGACAGAGTCAGAACCTACGACGAAAGGAAGCTG
GGATTCTGACATCTCTACGTATCCTACGACGCCGTTTCATAAATCTTTTT
GTTGCAAATGCCTGGGCTGGACGCTGGCTATTCTGCTCGTGCCAAGCATA
GTAGTTGGGATTCTTGTATACAAACGTGTGCTTTGGTTTACAATGCCAAC
AATAACCTATGAAAAAGGCTCTTCTCTGCGCATCTCGACGTTAGATGGTC
CACACTCGGCAACAGATTACAACGTG
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Synonyms
Publications