rna4339, rna4339 (mRNA) Nannochloropsis gaditana

Overview
Namerna4339
Unique Namerna4339
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length447
Alignment locationCM002463.1:327528..328452 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100268g6.9471.mrna
Orig protein idgnl|cribi|Naga_100268g6.9471
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:327528..328452 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100268g6gene4182Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4339rna4339-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26346.1cds4329Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4339 ID=rna4339|Name=rna4339|organism=Nannochloropsis gaditana|type=mRNA|length=447bp
ATGCATACCCTAGTTTCGATTCTGAGCGTAACTATGACGCCGATACGGGA
CCAAAAATCCTCGAAAACGATGTGCTCGCTGACAGGCTCCCGTTTTATCG
AGACTTGTGGCCGATTTTGCACAAAGGAAGGGCCCAAGAGAGGGAGGGTT
TCACCTTCGACGGGACAAGAAACACCCTCATCGCCATGCCACGGAAAGAC
CCGCAGATGCGATACGACCGGGTGCTTTACAGGGGCACGGCCATCCCGAC
GGAGGGAGGGAAGGACATGCCGGGAGGATGCCTGCATGCATGGGAGGCGG
AAGAGATATGCCTCGTGGGAACTGAGTCGAGGGAATCCCTCTTCCTTTCC
GACCACTTCGGATTGCTTGCTAGATTCCGACGCAGCCTATGTGGCCGATG
ACCGCGAAGTTCGCTATCTTGACCACGGACGACAGCGAGTCCATTAG
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protein sequence of rna4339

>rna4339-protein ID=rna4339-protein|Name=rna4339|organism=Nannochloropsis gaditana|type=polypeptide|length=261bp
MYLAVYWRLKGSFYEGQAGKWEARYREQVDKGRTMEAALKTALAEAMQAR
DGLALCQEEQASCCLTRGPTPMPAMPANPTGAKNESGTLESGTSSPANER
RGGRSGRKGAHSHPISNPDPSFTSVGSPPRPEPSVVPPTPRRPSFLPPGG
SSPTPHLSRCLLHLDVNQSPCTAEALQHLTGCVGHVLTSSELVLKEALKQ
GMGMMGKAQSLVDSVENFVDEATAEALVRVDGWMEGLARGLVAGEGDGIC
GQGGSPQSRQG
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mRNA from alignment at CM002463.1:327528..328452-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4339 ID=rna4339|Name=rna4339|organism=Nannochloropsis gaditana|type=mRNA|length=925bp|location=Sequence derived from alignment at CM002463.1:327528..328452- (Nannochloropsis gaditana)
ATGTACCTGGCGGTGTACTGGCGGTTGAAGGGCTCCTTCTACGAGGGCCA
AGCCGGCAAGTGGGAAGCACGCTATCGGGAGCAGGTTGACAAGGGCCGCA
CGATGGAGGCGGCTTTGAAGACCGCCTTGGCGGAGGCAATGCAGGCGCGG
GATGGCCTGGCCCTCTGCCAAGAGGAACAGGCCTCCTGCTGTCTGACGCG
CGGGCCCACCCCCATGCCGGCAATGCCAGCGAACCCTACGGGCGCCAAGA
ACGAGTCCGGGACCCTTGAGTCGGGAACATCGTCGCCGGCAAACGAGCGC
CGAGGGGGGAGGTCGGGCAGGAAAGGGGCTCACAGCCATCCCATCTCCAA
CCCGGATCCCTCGTTCACGTCTGTGGGGTCCCCTCCTCGCCCCGAGCCCT
CGGTGGTTCCTCCAACGCCCCGCCGCCCCTCTTTCCTCCCCCCCGGTGGC
TCCTCCCCTACCCCCCACCTGTCCCGCTGCCTCCTCCACCTCGACGTGAA
CCAGAGCCCGTGCACGGCGGAGGCCCTCCAGCATTTGACCGGCTGCGTAG
GCCACGTGCTCACTTCTTCGGAGCTTGTCCTGAAGGAGGCCTTGAAGCAG
GTACGTCGTGGGAGAAGCTTAGGTATCTCCTTTCCTCTTCTCTCTTCGTC
CCTGCCTTTCTCGAAGGGTTGAGCACCACGGAGGGACGTTCTGACTTGTT
TTAACTTGGCACGTGCTTCCAACCATTGTCTGCTCCCAGGGCATGGGTAT
GATGGGGAAGGCTCAGAGCCTGGTCGACTCGGTGGAGAATTTCGTGGACG
AGGCCACAGCCGAGGCGCTCGTGCGCGTTGACGGATGGATGGAGGGACTG
GCGAGAGGCCTGGTGGCGGGCGAGGGCGACGGGATCTGCGGTCAAGGGGG
ATCCCCGCAATCAAGGCAGGGGTGA
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Coding sequence (CDS) from alignment at CM002463.1:327528..328452-

>rna4339 ID=rna4339|Name=rna4339|organism=Nannochloropsis gaditana|type=CDS|length=1572bp|location=Sequence derived from alignment at CM002463.1:327528..328452- (Nannochloropsis gaditana)
GGCATGGGTATGATGGGGAAGGCTCAGAGCCTGGTCGACTCGGTGGAGAA
TTTCGTGGACGAGGCCACAGCCGAGGCGCTCGTGCGCGTTGACGGATGGA
TGGAGGGACTGGCGAGAGGCCTGGTGGCGGGCGAGGGCGACGGGATCTGC
GGTCAAGGGGGATCCCCGCAATCAAGGCAGGGGTGAATGTACCTGGCGGT
GTACTGGCGGTTGAAGGGCTCCTTCTACGAGGGCCAAGCCGGCAAGTGGG
AAGCACGCTATCGGGAGCAGGTTGACAAGGGCCGCACGATGGAGGCGGCT
TTGAAGACCGCCTTGGCGGAGGCAATGCAGGCGCGGGATGGCCTGGCCCT
CTGCCAAGAGGAACAGGCCTCCTGCTGTCTGACGCGCGGGCCCACCCCCA
TGCCGGCAATGCCAGCGAACCCTACGGGCGCCAAGAACGAGTCCGGGACC
CTTGAGTCGGGAACATCGTCGCCGGCAAACGAGCGCCGAGGGGGGAGGTC
GGGCAGGAAAGGGGCTCACAGCCATCCCATCTCCAACCCGGATCCCTCGT
TCACGTCTGTGGGGTCCCCTCCTCGCCCCGAGCCCTCGGTGGTTCCTCCA
ACGCCCCGCCGCCCCTCTTTCCTCCCCCCCGGTGGCTCCTCCCCTACCCC
CCACCTGTCCCGCTGCCTCCTCCACCTCGACGTGAACCAGAGCCCGTGCA
CGGCGGAGGCCCTCCAGCATTTGACCGGCTGCGTAGGCCACGTGCTCACT
TCTTCGGAGCTTGTCCTGAAGGAGGCCTTGAAGCAGGGCATGGGTATGAT
GGGGAAGGCTCAGAGCCTGGTCGACTCGGTGGAGAATTTCGTGGACGAGG
CCACAGCCGAGGCGCTCGTGCGCGTTGACGGATGGATGGAGGGACTGGCG
AGAGGCCTGGTGGCGGGCGAGGGCGACGGGATCTGCGGTCAAGGGGGATC
CCCGCAATCAAGGCAGGGGTGAATGTACCTGGCGGTGTACTGGCGGTTGA
AGGGCTCCTTCTACGAGGGCCAAGCCGGCAAGTGGGAAGCACGCTATCGG
GAGCAGGTTGACAAGGGCCGCACGATGGAGGCGGCTTTGAAGACCGCCTT
GGCGGAGGCAATGCAGGCGCGGGATGGCCTGGCCCTCTGCCAAGAGGAAC
AGGCCTCCTGCTGTCTGACGCGCGGGCCCACCCCCATGCCGGCAATGCCA
GCGAACCCTACGGGCGCCAAGAACGAGTCCGGGACCCTTGAGTCGGGAAC
ATCGTCGCCGGCAAACGAGCGCCGAGGGGGGAGGTCGGGCAGGAAAGGGG
CTCACAGCCATCCCATCTCCAACCCGGATCCCTCGTTCACGTCTGTGGGG
TCCCCTCCTCGCCCCGAGCCCTCGGTGGTTCCTCCAACGCCCCGCCGCCC
CTCTTTCCTCCCCCCCGGTGGCTCCTCCCCTACCCCCCACCTGTCCCGCT
GCCTCCTCCACCTCGACGTGAACCAGAGCCCGTGCACGGCGGAGGCCCTC
CAGCATTTGACCGGCTGCGTAGGCCACGTGCTCACTTCTTCGGAGCTTGT
CCTGAAGGAGGCCTTGAAGCAG
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Synonyms
Publications