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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100031g24.2258.mrna |
| Orig protein id | gnl|cribi|Naga_100031g24.2258 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:256215..256677 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4310 ID=rna4310|Name=rna4310|organism=Nannochloropsis gaditana|type=mRNA|length=5890bp
GGAATTGCAGTTGTTGGCTTTGGTTTTCCGTTTCCTTCTTCTTCGGCCCG
GGGGGGCCGCTGCTCGGACCGAGTCAGGGGGGGTGGTTGATATTCTCTGC
CTTGACACCTCATCAGTGGTCAGCTTCTATGCCCTGCATAGTATGTGAAC
ACGCTATATTCCATCTCAAATGTTTGCATTACCTTGTTCATGGTCATGAA
AGCATTGATACTGGTATTCATTCGTCGTTATGGGAGTTGGAACACAGATG
AGAAATTCATGTTGAGGATAGTCTCCTGCCCCCAGCCTCCCCTTAAATTT
CTTGAGGGGAGAGAGTTTACCATAGTGGAAGTGAACGCCGCCTTCCTTTT
TCCCCGGACGATTTCCCGCCGGCCTGAGGCGTACCACTTTCTGAGGCTCA
TTTGTTGTTGGTATTGAATGATGATGTCGACGCCCAGGATCCTAGGACCT
AGCCGCTCGTGATGCGGGGGCCATCTCGATCATGAAGCGCGGTGTTCTTC
TTCACCGACAACATCTGATGCCCACAGAAGGCAGCCACATCCAGCCTACG
TTTGATTGGGGACAAAACTGGAGAATCAGGCAAAGTTGAGATCAGTGTCA
GGTGTCCTTGTCACCGCTGATCTGAAGTCATCGAATAGCGCCACATCGAT
CTCTCCCTGAATGCTCAGTGAGCCTACGGAAACACCGTCTCCTCCTACCT
TGTCGTCCTCGTCCTCCTTTTTCATGTTCGGGGCCAGCGTCACCAAATTC
GTCACTGGGGGCAGGAGCAACGTGGCCAGGAGCAAAGGCTCGACCGAAGA
CTGTGACATGGGTGGCCCTTCGCTGTCAAATAACCCTTCCAGCACCACCC
CGGCAGCTTTGTCCCTCGACGCTGGAAATTCTGACGCCCCTCCCTCCAGT
ATGTCAGGCGCACAACTTCGCGGCTTTACGGCCCCTGATGCGGCCTCGCA
ATCAGAGCCGGCATCTTTACCCTCGCGCGGCTCGCAGAAGAACCTGGAGG
AGATGATTGGGTCCAGCCTAGCCTACGCCATCAACAGCCTCGACAACCTG
GTGCTCCACCCGTCCAGGGCCATGGCCTCCCTGACCGGTTTGGGCGGAGG
CGGCGGGAGCAGTAAAGACGAAGGGAAGGCTGTCGGTGCAAGCGGCGGTG
CTGGGCATGGCGGCAGCAATACCGACAGCACCACCAGTAGTTGTAGCAGC
GCCGGTAACGGGGTTGGTGTGCAGTTCTCCACCACAGGTGTGGCGGCCAC
CCCAGGCGCCTCTTCTCCTGCGGACTCAACGTCCGGTGCAACTAGTGGCA
CGTCGTCCCCCGCGGACCCGACATTGAACTCGCCGGAGAACAATCCCCAT
TTGTACCTGAACCCGCACATGCAGACGCATTCTAGAATTGAGCATGCCCC
CCACCCCGTAGGCCCTTCGCAGTCTTCCTTGGAGCCGAGCGCCTACCAGC
TACATCAGCTTCAGCAGCAACGCCTCCAGCAGATCCAGTCCCTTCAACGA
CAACAGCAAGAGAGTTCGACAGCGGGAAATCAATCCTCTGCAGCGGCACT
GTTGGCGGCCTCTTCGCAGCAAATGGTCATCCCGGGAAATATGACAGCTC
TGGCTCCTCATTTTTTGCAGCCTCAACAGCATAAACATCCAATTCCGAAC
CCACACCATGCCAGGCTGCCGGTCCCTCCTCCCTTGCCTCAGCAACAGCA
ACAAGCAGCCTTACGGCAACAGCAACAGCAGCAGCTAGTTTCTTCAAAAT
CGGGCGAAGGCAAAGTGGATTCGCCGGTGTTATCACGAGACCCGTCGATG
CAAAATACAAGCGGTGGCCATCTCCACTCCATCAGTCACAATGATAGTCA
TCAGCACCACTATCAGCTGCAGAAACCGGCGCGTCCTTTCCATCAGAGCG
CAGGCACGCCGAATCCGGCATCCAATTCTCAAAACACGCCTCCCCCTTAC
CCTTACCAGCATAACCAGCTTCAACTAAACCAGCAGCAGCAGCACTTGGG
TGTGAAGAAATCACAGGAATGTGCGAACTTGGAGCATAGTGGCGCAGCTG
GTGTTGGAGCTGGGAGAAATCGCGCATCGCTTTTCGAAACTCTCGTTGGG
GTTGAGCTCTGCCATTTTCTTCTTGAAACCGAGTCTCGAGCTTTGATCCT
GTTCAATGTCGAACACGTATCCGCCGAGCACCTGACGCGTGTCTGTGAAA
ATCTGGGAACGCTTGCCTACCTCCGGATGGATTTCCGTGCAAATCGAGGC
GTGGTCTTCTTGGCCTACCATGACTTGAGAGCCTCCCTCCGAGCATTCCA
CATTCTGCCACGCGAGTTGGGCGCCATGTCGCAGTACGACACGGCGTTAT
GCCCTTCGGGCCGCCCTCCTTCCCCACTTGCACCCACCCCGTCCGTGCAT
TACTCTATCATGCTTAACGCCGCGACAACCCCTCGGGACGGCATCCTTCT
CGTCCGGGAGGCCTCGCCCTCGTCTTCACCGTCGCACTCGCTTCCGTTCA
CAGAATCTGACGTCCAAGCTGTCTTCTCGAGCTACGGACAGCTAAAAAAT
GTCCATCGCCGGATTCTTCTTTCCTCCTCTCCATCCTCTTCCAACACCTC
TTCCTACCACACGGTTACACCGCCCTCGGGCTCTCTACCGCTCCCACCTG
GGAATGGACTCGCATTTCTGGTCGAATTTTACGACGTTCAAGATGCGAAG
GCGGCTGCCTCTGAACTCGCGTCTACTACGCCTTGGGGGGCCTCTGTGCA
AGTCGAGGAGGCGGAGAGAGCAGCCAAAGAAAGACAACTTGGCCAGCAGT
TGCTCTTGACGTTACACCGGTGGCGAGAGGAAGGCCGTGCTGCCCAGCTG
TCGGCAGCTCTTGTCTCGCCGCTCTCTGGAACAGGCGGTGGACGAGAAGG
ACTGGGCGGAGAAGAAGGGCTCGAAACATTGCTGCCGTCGAGTGCCTCAT
CCATTGGCACACTCTATACGGGAAATGCCAGCAGCCACGGACACGGAAGC
TTCTACGGGGGGTCTCCTTTGGGGTCGGGGGCAACGACAGCGGGCACGAC
GCTGTCCTCGTCGTTGAGTCCCTCCCACCTCCTCTTTCTGCAGCACTCGG
CCGCGTATCCAGGCCACACGCCTTCTCCCTCCTCGGCAGGATTTATGATG
CATGGAGGGGAGAGGGGCACTAGTGTGGGCAAGAACAAAGGTGCTCAGAG
CAGCAACGGCAATAATGTGGACAGGAACAATACCTCAGATGTGGGCCACA
TCGGCAAAAGTGCCTGCGAGAATCATTACAACGGGTACAACAATCACTCC
GCATCGGCAAACTTTGCAGGCACCATGCACAACAACATCAACAAGAAGAA
CAACAACGTCAACATCCACAATATCAACAACAATCACAACGTGACAAACA
CGAATGTGATGAGCAACAGTCTACATGCGGTGCAAAACCTCGCGAGTGGG
GCTGGGGGTGCAGGAAGGAGCTCTGTCTACGGGCACAGTCCCAGTGGAAC
CCAAAGTGCCACGCCGACTTCAGTGGGATATGGTTCTTCCTCCCCTTTTG
GAGGCATGCACTCTTCTGCCTCGTCGTCCTCCACGGCCAGCGCGTTGGGT
GTGTATTTGCCTGGGATGCAACATCACCATCAACAACTGGCTATGTCTCA
GATGCAGTTGGAAGGTGTTCCCCCATCTTCCTCTTTGGATCCGCATGGGA
TGAGTAGTGGAGGGATGAACGGAAATGACGCTGCAACAGCCGCTGCCGCT
GCTGCTTTTAAAGGTCTATGGGTGTCACCGCCTCACAACATGTGTTCGCC
GCCTCTGATGCCCGGAATGGGCCCAAGTGTTCATGGAAAGAACAGGCTGT
CTCCCAATACGGGTGCCCAATACTCGAGGATCATGACGGCCACGGCGAGC
ACGGGGAGGTATCCACCCCCCTTCGGCGGCGGAACAAACGGGATGATGGG
AGGAGGATCTGGTGGAGGAGATACGGAGTTCCACCTTGACGTTGAGCGCA
TTCTTATGGGTATGGACCGTCGCACGACCATCATGGTTCGGAACGTGCCC
AACAAGTACTCTCAACAATTACTCCTGAACGAGATCAATGCGGCGCACAA
GGGGAAGTACGATTTCTTCTACCTTCCCATTGATTTCAAGAACAAATGCA
ACGTCGGATATGCCTTCATCAATTTCATTGAGCCCAAGGCTATCGTGCCT
TTCTTCAAAGAATTTAACGGGCAAAGGTGGAGAAATTTCAACAGCGAGAA
GGTCTGCGCCATTTCTTACGCAAGGATTCAGGGGAAACAAAGCATGATAT
CCCGCTTTTCGAACTCTTCATTGATGGAAAAGGATGGAGAGTATCGGCCC
TTGCTGTTCTACTCTTCGGGGCCTGACAGAGGGAAGCCTGAACCCTTCCC
GTCCTCTTTGAAGCATCACGGCAGAAAGTCCGGGACTAACACACCCACGA
CTCCGACTTTTTTGGGGATGGCGGGTTTAGGAGGGATGGGAATGATGTAA
GGAGGGAAAGGGAACGAGTTGAATGACAAGGTGGCTATTGTCTTCGTATT
GCAACTCTGGAAGTCGCTGTCCAGGAGAAACAGCGAGCTGTACTTGGCGT
CTCTTCACTTATTCGTACACATACATATAAATTGTTTCCTGGATATTGTT
GGGCAATTTTGATGGTCTTCCGTTGCTATGTCAACAGTCGTAAACATTTG
AAAAGATGACTGGAGAGACCTGACGAAATGAGATATGATGTGTGAGAGCA
TATATGCGAGTATTTGTGAACGTGTGAGCATGCCTGCATTTTGCGTTGAG
CTTTGGCGAAGAGAAAGGGACAGGTATCACATGATAGATTTCATATATAT
AGATACATTTACACATACATAAGTTGCGGATTTGATCCGAATTTATGGCG
GCATGTGTGGATGCAACTCGGAGTGGCTTGGACGTTAAAGTGTTGAGATG
GCATACGAGGTACACTAGATGTAGGAGCAGCGGTCAGTTGACGTTGCATT
TTTTCCCGGGCCAGGGAGATGATATTTGAACGCACTGAGTGTTCGAAAGA
GGGGCATCTACCAACGGCGGGGCGGGACGACTTCTCCACGAAAATGTATT
ATGATCCAGCACAAGCAGTCTCAAGTGTTCGATGTGAAGGAAAGATTATT
ATCTAGCATAACAGAGTGAGTCAAAAGGACAGGGAAAGCCGAAGTAAAGC
AGCAAGTTTAATGTCGTGAAAGGATGTAGACAAATACACGAAACGGAAGC
TAGACGGGCGGGTAATACTGATAGATTATACGTGGCTGAAAAGCAAACCT
TTTGTCGGTGTTTAGTCAGCCACACTGGTGTTCTCTCAGTTGCCTTTAAA
AGTTTGGTGATGAGTACTTCAAAGCAATTTCTCGATTCGGAAAGATTGGC
TGGACTAGAATAGCAGACGTGGCAGAGAATGTAAATGATCCATAGAACAC
AATCCAGCGACGTCGAATATGAGCCGCACCTGAAGACATTGGAACAGGTG
AGGTGGTCTATGAGGTGGGTGATGAGTCATTCACTCAAGCATCGGCAATA
TTCTATGTAAGTCTGAGACTTTCCCTTTCAGTTCGTATCATCGGCTGGTC
TCGCCTTCAGCCTGTTGTGCCGGTTTCAATTTGACGCAAATTTTGTGAAA
GCATGCCACTCTTCTTCCCCTTGCTAGCTGGGGAAGGTGGCCATCATCGG
GGGAATAAAGGCGTATACCAATTTTTCAGCCTCCCCAAGCTGCACATGTC
CGAAAGCACGAAGAGGAAAGAGGACGTATAAGTTCTATCTAAAAGAGACA
AACAAAGCGTTTAGGTGGCAATATATCAGGGACAAAATATCTTGAAGAAC
ACTCCAGAGAACGAATCGCACTAGTGTCAAAGATGCATTA back to topprotein sequence of rna4310 >rna4310-protein ID=rna4310-protein|Name=rna4310|organism=Nannochloropsis gaditana|type=polypeptide|length=123bp
MTMNKVMQTFEMEYSVGPPGPKKKETENQSQQLQFRLKDPKSVEELCRIA
YNGSTCTLSCGARMFVVGFLVGSGRLLSDLTLLGSRTQGPGFCTHALVAS
VSPISLSFLPLLSLSDFLYIRVC back to topmRNA from alignment at CM002463.1:256215..256677+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4310 ID=rna4310|Name=rna4310|organism=Nannochloropsis gaditana|type=mRNA|length=463bp|location=Sequence derived from alignment at CM002463.1:256215..256677+ (Nannochloropsis gaditana)
ATGACCATGAACAAGGTAATGCAAACATTTGAGATGGAATATAGCGTGTT
CACATACTATGCAGGGCATAGAAGCTGACCACTGATGAGGTGTCAAGGCA
GAGAATATCAACCACCCCCCCTGACTCGGTCCGAGCAGCGGCCCCCCCGg
gccgaagaagaaggaaacggaAAACCAAAGCCAACAACTGCAATTCCGCC
TGAAAGATCCCAAATCTGTGGAAGAATTATGTAGAATAGCTTACAATGGA
AGTACATGTACCCTTTCTTGTGGTGCTCGAATGTTTGTTGTCGGGTTTTT
GGTCGGTTCTGGACGCCTCCTTTCGGATCTTACGCTGCTAGGCTCGCGGA
CTCAGGGTCCGGGCTTCTGCACCCATGCGCTGGTGGCTTCGGTTAGTCCG
ATATCCTTGTCATTTCTTCCCTTACTGTCTCTTTCTGACTTCTTGTACAT
TCGTGTTTGTTAA back to topCoding sequence (CDS) from alignment at CM002463.1:256215..256677+ >rna4310 ID=rna4310|Name=rna4310|organism=Nannochloropsis gaditana|type=CDS|length=744bp|location=Sequence derived from alignment at CM002463.1:256215..256677+ (Nannochloropsis gaditana)
ATGACCATGAACAAGGTAATGCAAACATTTGAGATGGAATATAGCGTCGG
CCCCCCCGggccgaagaagaaggaaacggaAAACCAAAGCCAACAACTGC
AATTCCGCCTGAAAGATCCCAAATCTGTGGAAGAATTATGTAGAATAGCT
TACAATGGAAGTACATGTACCCTTTCTTGTGGTGCTCGAATGTTTGTTGT
CGGGTTTTTGGTCGGTTCTGGACGCCTCCTTTCGGATCTTACGCTGCTAG
GCTCGCGGACTCAGGGTCCGGGCTTCTGCACCCATGCGCTGGTGGCTTCG
GTTAGTCCGATATCCTTGTCATTTCTTCCCTTACTGTCTCTTTCTGACTT
CTTGTACATTCGTGTTTGTTAAATGACCATGAACAAGGTAATGCAAACAT
TTGAGATGGAATATAGCGTCGGCCCCCCCGggccgaagaagaaggaaacg
gaAAACCAAAGCCAACAACTGCAATTCCGCCTGAAAGATCCCAAATCTGT
GGAAGAATTATGTAGAATAGCTTACAATGGAAGTACATGTACCCTTTCTT
GTGGTGCTCGAATGTTTGTTGTCGGGTTTTTGGTCGGTTCTGGACGCCTC
CTTTCGGATCTTACGCTGCTAGGCTCGCGGACTCAGGGTCCGGGCTTCTG
CACCCATGCGCTGGTGGCTTCGGTTAGTCCGATATCCTTGTCATTTCTTC
CCTTACTGTCTCTTTCTGACTTCTTGTACATTCGTGTTTGTTAA back to top
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