rna4296, rna4296 (mRNA) Nannochloropsis gaditana

Overview
Namerna4296
Unique Namerna4296
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1215
Alignment locationCM002463.1:206152..208277 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100031g38.2259.mrna
Orig protein idgnl|cribi|Naga_100031g38.2259
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:206152..208277 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100031g38gene4141Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26376.1cds4286Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4296rna4296-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4296 ID=rna4296|Name=rna4296|organism=Nannochloropsis gaditana|type=mRNA|length=1215bp
GGGGTTGGGATTGATGTGCCAGTCGTTGGTGGTGATGAGGGTCGTGTGGT
AGCGGTAGGAGTGAGGGAGCCTTCGCTCTCACAGTCTTGGAGTGTATGCT
CAAGGAGCCATCAGAATTTCATTAACATACATGGATACGTGTACGAATGA
TATGGTAACGATGTGTGATGAGCACAGGCCCTGATCCTTGAAAGAGTATT
ACCACTAGCTGTCATGCTCACGGCCCTCATATAATTCTTTCCCATCCCGC
CAAACGCTTCACGCTTTGCTCTGGCACAGTCAACCATGACCACCAACATC
TCCAAGAAAAGGAAGTTTATTGCGGATGGTGTCTTTTATGCCGAGCTGAA
CGAGCTCCTGACGCGTGAGCTGGCTGAGGATGGGTACGCCGGCGTAGAAG
TTCGTGTAGTGCCCCTTCGCACAGAAATCATTATCTCAGCCACGCGTACG
CAGAATGTGCTGGGTGAGAAAGGCCAGCGCATTCGCGAGCTGACTACGGT
GATCCAGAAACGCTTTAATTTTCCCGACGGTGTCGTTGAACTTTTTGCTG
AGAAGGTAGCATCACGAGGACTCTGCGCACAAGCCCAGGCCGAGTCTTTG
AAGTACAAGCTGCTGGGGGGCCTGGCGGTCCGACGAGCTTGCTACGGCGT
GCTTCGTTTTGTGATGGAGCAGGGTGCCAAGGGTGCCGAGGTCATTGTCT
CGGGCAAGCTCCGTGCGCAGCGTGCCAAGAGCATGAAATTCCAGGACGGG
TACATGATCAAGTCCGGGCAGGCGAAGCGAGAATACGTGGATTACGCAGT
GCGGCATGTGCTGATGCGTCAAGGTGTATTGGGTGTCAAGGTGAAAATCA
TGCTGCCGCACGACCCTGCTGGCAAGATTGGCCCGAAAGCTAAATTGTCG
GATGTGGTGAATGTGCTGGAGCCCAAGGAGGAGATCGAATTGCCTGTTCC
CGAGCCAGTAACGATGTCATACGGGGGGATGGGTGGGATGGCACCCGCAC
CCATGGCTTCTTACTGAGGAGCGAAGGATGAAAGGGATTGAGAGGAAGAC
TGCCCTATGCAGAAGATTGCTTTGGTAGCTTGTCGATCTGGAACATCATT
TACAAGCTGCTGGCATGTCATCTTCTTGTTTGGCGTGAAGAGGTGTTGCT
GCAAGGGAGGTTAGAAGGAAGACTCGAAGTTTCAAGGAAAAGAAAAGAAA
ATCGGGCATTCGAAG
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protein sequence of rna4296

>rna4296-protein ID=rna4296-protein|Name=rna4296|organism=Nannochloropsis gaditana|type=polypeptide|length=555bp
MRQPNYHVSTDKLIEPTCNPCMNYLDASLLLHAFSFAMGEEALKHWRGQS
KDCCLCPLSEGEEIPLITSKSARLRGDCRLVCKEWCQVLGGPVLKSVGFP
AQDLLRTHATSNRQVCTPPRQFGPWNGPDMFSGLRSVTFAVTLSMLLDPL
EGWQEELQALASRRKGSGAVNVRLQVKKVGRTKREVRAILARASTAASME
GWSEDWGEHGEEGDEGDEEVGEEEGTGNPPGMPAATPSSLAPLPGNVWPA
TPEEEGEVDILEDVPHADTGGTMGGLGGVVFGHGPDNGAEEDALDAITQL
RPQILPRPFTLRLLPPPTSGFVLREIDLAGLTTAQEGVEGSSLGVSTPSP
PPPPGHHAGGGHDRGSQSVSPPHTPPSVPFEEPFNLLDDTVHLLLRHMPG
TVERLSLARNPHLHRPLSPLSSHPIAPHLKEIVLDGCWRIDMYHLRAVEA
VRGTGLWVDLLHECFGNGRGSSGGSRPCGMKEVVILNGKHRGAWVRCWVI
HKAGPSRYHCKVCATVEYDNAVGFSDRAALDISRKHLRHFCGRKVETWAH
ENWHK
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mRNA from alignment at CM002463.1:206152..208277-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4296 ID=rna4296|Name=rna4296|organism=Nannochloropsis gaditana|type=mRNA|length=2126bp|location=Sequence derived from alignment at CM002463.1:206152..208277- (Nannochloropsis gaditana)
ACAGGGCTAAGTGCTACGTAAGAGAATTGTGACCGGCAGGCATGAGGCAA
CCAAACTACCATGTTTCAACAGACAAGCTGATAGAGCCTACCTGCAACCC
GTGCATGAATTACCTCGATGCCTCGTTGCTGCTGCACGCTTTCAGCTTTG
CAATGGGCGAGGAAGCGTTGAAGCACTGGCGGGGACAATCGAAAGATTGC
TGCCTGTGCCCTTTGTCGGAGGGGGAGGAAATTCCCCTGATCACAAGCAA
GTCTGCCCGCTTGCGAGGAGACTGCCGTTTGGTCTGCAAAGAATGGTGCC
AAGTCCTCGGGGGCCCTGTATTGAAAAGTGTGGGTTTCCCCGCACAGGAT
TTGCTACGCACGCATGCCACATCCAACCGACAAGTTTGCACCCCTCCTCG
GCAATTTGGCCCTTGGAACGGACCGGACATGTTCTCTGGCCTCCGATCTG
TCACCTTCGCAGTCACCTTGAGCATGCTGCTAGACCCCTTGGAGGGTTGG
CAGGAAGAATTGCAGGCATTGGCGTCGCGGAGAAAAGGGAGCGGCGCGGT
GAACGTCAGGCTTCAGGTCAAAAAAGTGGGACGCACAAAACGCGAGGTGC
GGGCGATCTTGGCCCGGGCATCCACTGCTGCGAGCATGGAAGGATGGAGC
GAGGACTGGGGGGAGCACGGGGAGGAAGGCGACGAGGGGGACGAAGAGGT
GGGCGAGGAGGAGGGGACGGGAAACCCTCCGGGCATGCCAGCAGCGACGC
CTTCATCCCTTGCCCCTCTCCCGGGGAATGTATGGCCGGCGACCCCCGAG
GAAGAGGGGGAGGTGGATATACTCGAGGACGTCCCACATGCAGACACGGG
GGGCACCATGGGCGGCTTGGGCGGGGTAGTGTTTGGGCACGGTCCAGACA
ATGGGGCGGAGGAAGACGCGCTCGACGCCATCACCCAGTTGAGACCTCAG
ATCTTACCCCGTCCATTCACACTGCGTCTTTTGCCTCCGCCGACGTCCGG
GTTTGTCTTGCGGGAAATCGATCTTGCTGGCCTCACGACGGCTCAAGAGG
GAGTAGAGGGCTCTAGTCTTGGGGTGTCGACGCCTTCCCCGCCTCCACCG
CCCGGGCATCATGCGGGTGGAGGACACGACCGGGGTAGCCAGAGCGTTTC
TCCTCCCCACACGCCTCCCTCAGTGCCCTTCGAAGAGCCCTTCAACCTTC
TTGACGACACGGTGCACCTTCTTTTGCGCCACATGCCGGGAACGGTTGAA
CGCCTGTCCCTTGCTCGGAACCCGCACCTCCACCGCCCCCTCAGCCCGCT
GTCTTCCCATCCCATCGCCCCGCATTTGAAAGAAATCGTCTTGGACGGCT
GCTGGCGTATAGACATGTACCATCTCCGTGCAGTGGAAGCAGTGCGAGGG
ACAGGGCTGTGGGTGGATTTGCTCCACGAATGCTTTGGGAACGGTCGAGG
GAGCTCGGGAGGTTCGCGGCCCTGCGGGATGAAGGAAGTGGTGATATTGA
ATGGCAAACACCGGGGTGCATGGGTGAGGTGCTGGGTGATACACAAGGCG
GGCCCATCTAGGTATCATTGCAAAGTTTGCGCAACAGTTGAGTACGACAA
TGCTGTGGGCTTCTCGGACAGAGCAGCCCTTGATATCAGTCGAAAACATC
TCAGACATTTTTGTGGACGGAAGGTGGAGACTTGGGCACACGAGAATTGG
CACAAATAGATCTGCAATGTACTCATCTGTTGTGGAGATGAATTTGTAAA
TCTGCATGCTCAGGAACCTTGAAAGAAGTGCTAAGTGCTCGATCTAGAAT
ATTGACATGCAATCGACTCCCTGCACATCAAGAGTCATCAGAAATCCGCC
CCATAGAAATCAAAATGCCAAGCTGTAGCCTGATGGGACACGAAGTGTTA
TAAATCCTTCTTTGGCTTTGTGTTGCATACGTTTTTTCCTATCACGTGTG
ACTGTGCTCCTGGCGGGTGGTAACACAAGTCCCGGGCTCTCGAGGCAAGG
CCCTCTATGTTCCTCGGCTGAGAATGGGCTCGATAGAAATGTCGGGACAT
GGTTTGGTAAGAATGTCTAGGGAATATCCCATGACATATGTGGGGGACCG
TAAGCAACGCAAAAGCAAACCAGAGA
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Coding sequence (CDS) from alignment at CM002463.1:206152..208277-

>rna4296 ID=rna4296|Name=rna4296|organism=Nannochloropsis gaditana|type=CDS|length=1668bp|location=Sequence derived from alignment at CM002463.1:206152..208277- (Nannochloropsis gaditana)
ATGAGGCAACCAAACTACCATGTTTCAACAGACAAGCTGATAGAGCCTAC
CTGCAACCCGTGCATGAATTACCTCGATGCCTCGTTGCTGCTGCACGCTT
TCAGCTTTGCAATGGGCGAGGAAGCGTTGAAGCACTGGCGGGGACAATCG
AAAGATTGCTGCCTGTGCCCTTTGTCGGAGGGGGAGGAAATTCCCCTGAT
CACAAGCAAGTCTGCCCGCTTGCGAGGAGACTGCCGTTTGGTCTGCAAAG
AATGGTGCCAAGTCCTCGGGGGCCCTGTATTGAAAAGTGTGGGTTTCCCC
GCACAGGATTTGCTACGCACGCATGCCACATCCAACCGACAAGTTTGCAC
CCCTCCTCGGCAATTTGGCCCTTGGAACGGACCGGACATGTTCTCTGGCC
TCCGATCTGTCACCTTCGCAGTCACCTTGAGCATGCTGCTAGACCCCTTG
GAGGGTTGGCAGGAAGAATTGCAGGCATTGGCGTCGCGGAGAAAAGGGAG
CGGCGCGGTGAACGTCAGGCTTCAGGTCAAAAAAGTGGGACGCACAAAAC
GCGAGGTGCGGGCGATCTTGGCCCGGGCATCCACTGCTGCGAGCATGGAA
GGATGGAGCGAGGACTGGGGGGAGCACGGGGAGGAAGGCGACGAGGGGGA
CGAAGAGGTGGGCGAGGAGGAGGGGACGGGAAACCCTCCGGGCATGCCAG
CAGCGACGCCTTCATCCCTTGCCCCTCTCCCGGGGAATGTATGGCCGGCG
ACCCCCGAGGAAGAGGGGGAGGTGGATATACTCGAGGACGTCCCACATGC
AGACACGGGGGGCACCATGGGCGGCTTGGGCGGGGTAGTGTTTGGGCACG
GTCCAGACAATGGGGCGGAGGAAGACGCGCTCGACGCCATCACCCAGTTG
AGACCTCAGATCTTACCCCGTCCATTCACACTGCGTCTTTTGCCTCCGCC
GACGTCCGGGTTTGTCTTGCGGGAAATCGATCTTGCTGGCCTCACGACGG
CTCAAGAGGGAGTAGAGGGCTCTAGTCTTGGGGTGTCGACGCCTTCCCCG
CCTCCACCGCCCGGGCATCATGCGGGTGGAGGACACGACCGGGGTAGCCA
GAGCGTTTCTCCTCCCCACACGCCTCCCTCAGTGCCCTTCGAAGAGCCCT
TCAACCTTCTTGACGACACGGTGCACCTTCTTTTGCGCCACATGCCGGGA
ACGGTTGAACGCCTGTCCCTTGCTCGGAACCCGCACCTCCACCGCCCCCT
CAGCCCGCTGTCTTCCCATCCCATCGCCCCGCATTTGAAAGAAATCGTCT
TGGACGGCTGCTGGCGTATAGACATGTACCATCTCCGTGCAGTGGAAGCA
GTGCGAGGGACAGGGCTGTGGGTGGATTTGCTCCACGAATGCTTTGGGAA
CGGTCGAGGGAGCTCGGGAGGTTCGCGGCCCTGCGGGATGAAGGAAGTGG
TGATATTGAATGGCAAACACCGGGGTGCATGGGTGAGGTGCTGGGTGATA
CACAAGGCGGGCCCATCTAGGTATCATTGCAAAGTTTGCGCAACAGTTGA
GTACGACAATGCTGTGGGCTTCTCGGACAGAGCAGCCCTTGATATCAGTC
GAAAACATCTCAGACATTTTTGTGGACGGAAGGTGGAGACTTGGGCACAC
GAGAATTGGCACAAATAG
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Synonyms
Publications