rna4292, rna4292 (mRNA) Nannochloropsis gaditana

Overview
Namerna4292
Unique Namerna4292
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length989
Alignment locationCM002463.1:197212..198350 -

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Properties
Property NameValue
Productinositol monophosphatase
Orig transcript idgnl|cribi|Naga_101240g1.5741.mrna
Orig protein idgnl|cribi|Naga_101240g1.5741
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:197212..198350 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101240g1gene4137Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26390.1cds4282Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4292rna4292-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4292 ID=rna4292|Name=rna4292|organism=Nannochloropsis gaditana|type=mRNA|length=989bp
CCGTACGAATTGCTCAACATAGCCTGTGTATATCTCGGACATATTTGCTT
GCAGAAATAAGTGGAGTTGAGCGTGACGTTGATGACTACTAGCTTTCAAG
AGGGAGAAGAGAATCGTCTGCTGGCCTGGACTTTTTAGAGAGGGGTTGGG
ACATTGCATAGACTCGACGGGTCACTCCTCCTTGCGTCTTCCATGCAAGG
TTTCCCGCGTTTGCCCTCACGAGCTACCACCGATCAACCGTTCCTTTCCT
ACCTTCAGGCAGGAAAATGGGCGCTGCCTGCACACGTGACGCAGCTAAAC
ACTTAGAAAATCCGATGCAGCCGCCAACCCTTACCGCAACCCATTCCTTT
CCTTCCTACAACGGGGGATATGTTTCCAACCTCCCCCTTGCCACGCTCCT
GGCGGAAGCTACTTCCCGCCTCTGCGTCTATCAAAACACCATCACGCTGG
AGTACGTCCTTCTTCCTACTGACGCCGACGACACGGTGGGTCTGGGGCCA
AACTGGAGCCGTCTTTCTCCCGCCCTTCCTACTCAAGCCACGGCGCTCGA
CCGCACTTCCAAATTGACTGCGCTCCGGCCGCCCCCAACACTACCCGGAA
CCCCTGAGCGACACACGGGCCGCCTGCCCGACCTTCCTCCCTCCCTCCCT
CCCCCACGACCTGCCGGCCCCGCCCTGCCTGCCCCGCCTCCTGGGCCCCC
CTCGTCCACGTCCCGAGGCCTGAAATGTCGGGTATGTGAACGCGAGGTGC
CGACTAAGGCCATGCTCCAAGAGCATTTGAACACCTGCCTGCTGGTGGCG
GACGCCCGTGGGCAAGCGCGGGGGTCGGACGAGGGCCTGAAAGTTGTCCT
GGGCGAGCTGCGGCGGATTTTGGAGGAGAAGATGAACGTGATGCTGCATA
CTGGTCCGGAGGGGGGGAATGGAGGGAGGATAGGAGGGAGGAAGGGAGGA
AGGGGGGGGGGGGGGGCAAAGAAGCCACACCTACCGTAG
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protein sequence of rna4292

>rna4292-protein ID=rna4292-protein|Name=rna4292|organism=Nannochloropsis gaditana|type=polypeptide|length=343bp
MAAAEPAPPLFPSQKELETYCQSAENAARNAGELIMASLRARQSRPCLAV
ESKGGVDLVTEVDRLCEKEITQALRAEYPTHAFIGEESIFLSTGELSSSS
APFGLPGESAPTWIIDPIDGTTNFVHGHPFIAVAIGLSIHQDVVLGVIYL
PVLNEMYRAWRGGGARCNDGPLLKVSGAQSIHDALLVNNIGSCREQEFLQ
LSFHRLYALMTAKLPGPLQGLRMSGSACVNLALVAGGRLDAYVEDGVGGV
WDVAAGKILVEEAGGVVVGWEGEPWVLTMGRGRVIAGNAALVSDLVARMR
DVDGRVWRRKRLRVALKVGMIALMGVGLLAMRRRREGATRRSG
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mRNA from alignment at CM002463.1:197212..198350-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4292 ID=rna4292|Name=rna4292|organism=Nannochloropsis gaditana|type=mRNA|length=1139bp|location=Sequence derived from alignment at CM002463.1:197212..198350- (Nannochloropsis gaditana)
TGAGGGCCCCAAAATGTGTTTTCTCTCGGCTGTGGAGAGATGTTCTCCAA
GTAGCGCACCTTAGCCTCTTACTTTTCTCCTTCGACTCGTAACCCTCCAC
AGCTCCGATGGCCGCTGCCGAACCGGCACCACCGCTGTTTCCCTCTCAAA
AAGAGTTAGAAACCTACTGTCAGAGCGCTGAAAATGCTGCGCGGAACGCT
GGTGAGCTTATAATGGCTTCTCTTCGGGCCCGTCAATCCAGACCTTGTTT
GGCCGTGGAGAGCAAAGGGGGGGTAGACTTGGTGACAGAAGTGGACAGGC
TTTGCGAAAAAGAAATCACCCAAGCCCTTCGTGCAGAATACCCAACGCAC
GCTTTCATCGGGGAAGAATCCATATTCCTGTCCACTGGGGAGCTGTCGTC
CTCCTCCGCCCCTTTTGGCCTGCCCGGCGAGTCAGCGCCCACTTGGATCA
TCGACCCCATAGACGGAACTACCAACTTCGTGCACGGTCACCCCTTCATC
GCCGTCGCCATCGGCCTCAGCATCCATCAAGATGTGGTCCTGGGCGTCAT
CTACCTCCCTGTCCTGAACGAAATGTACCGGGCATGGCGAGGGGGTGGGG
CCCGCTGCAACGACGGCCCCCTTTTGAAGGTGAGCGGGGCCCAAAGCATT
CACGACGCCTTACTCGTGAACAACATCGGTTCCTGCCGCGAGCAGGAGTT
CTTGCAACTGTCTTTCCACCGGCTTTACGCCCTCATGACCGCCAAGCTTC
CCGGGCCGTTGCAAGGCCTGCGCATGTCCGGTTCGGCCTGTGTGAACCTC
GCCCTAGTCGCAGGGGGGCGCCTGGACGCCTACGTGGAGGACGGGGTGGG
CGGTGTGTGGGACGTCGCGGCGGGGAAAATATTGGTGGAGGAGGCGGGCG
GGGTGGTGGTGGGGTGGGAGGGGGAGCCGTGGGTGCTGACGATGGGGAGG
GGAAGGGTGATAGCCGGGAATGCCGCGCTAGTCTCTGACCTGGTCGCGCG
GATGAGGGATGTGGACGGGAGGGTCTGGAGACGGAAACGCTTGCGAGTGG
CACTTAAGGTGGGGATGATCGCTCTTATGGGTGTGGGCTTACTGGCGATG
AGGAGGAGGAGAGAAGGGGCCACAAGGCGGTCAGGGTAA
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Coding sequence (CDS) from alignment at CM002463.1:197212..198350-

>rna4292 ID=rna4292|Name=rna4292|organism=Nannochloropsis gaditana|type=CDS|length=1032bp|location=Sequence derived from alignment at CM002463.1:197212..198350- (Nannochloropsis gaditana)
ATGGCCGCTGCCGAACCGGCACCACCGCTGTTTCCCTCTCAAAAAGAGTT
AGAAACCTACTGTCAGAGCGCTGAAAATGCTGCGCGGAACGCTGGTGAGC
TTATAATGGCTTCTCTTCGGGCCCGTCAATCCAGACCTTGTTTGGCCGTG
GAGAGCAAAGGGGGGGTAGACTTGGTGACAGAAGTGGACAGGCTTTGCGA
AAAAGAAATCACCCAAGCCCTTCGTGCAGAATACCCAACGCACGCTTTCA
TCGGGGAAGAATCCATATTCCTGTCCACTGGGGAGCTGTCGTCCTCCTCC
GCCCCTTTTGGCCTGCCCGGCGAGTCAGCGCCCACTTGGATCATCGACCC
CATAGACGGAACTACCAACTTCGTGCACGGTCACCCCTTCATCGCCGTCG
CCATCGGCCTCAGCATCCATCAAGATGTGGTCCTGGGCGTCATCTACCTC
CCTGTCCTGAACGAAATGTACCGGGCATGGCGAGGGGGTGGGGCCCGCTG
CAACGACGGCCCCCTTTTGAAGGTGAGCGGGGCCCAAAGCATTCACGACG
CCTTACTCGTGAACAACATCGGTTCCTGCCGCGAGCAGGAGTTCTTGCAA
CTGTCTTTCCACCGGCTTTACGCCCTCATGACCGCCAAGCTTCCCGGGCC
GTTGCAAGGCCTGCGCATGTCCGGTTCGGCCTGTGTGAACCTCGCCCTAG
TCGCAGGGGGGCGCCTGGACGCCTACGTGGAGGACGGGGTGGGCGGTGTG
TGGGACGTCGCGGCGGGGAAAATATTGGTGGAGGAGGCGGGCGGGGTGGT
GGTGGGGTGGGAGGGGGAGCCGTGGGTGCTGACGATGGGGAGGGGAAGGG
TGATAGCCGGGAATGCCGCGCTAGTCTCTGACCTGGTCGCGCGGATGAGG
GATGTGGACGGGAGGGTCTGGAGACGGAAACGCTTGCGAGTGGCACTTAA
GGTGGGGATGATCGCTCTTATGGGTGTGGGCTTACTGGCGATGAGGAGGA
GGAGAGAAGGGGCCACAAGGCGGTCAGGGTAA
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Synonyms
Publications