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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100715g1.2644.mrna |
| Orig protein id | gnl|cribi|Naga_100715g1.2644 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:194142..195130 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4291 ID=rna4291|Name=rna4291|organism=Nannochloropsis gaditana|type=mRNA|length=1975bp
GAACGTGTGAGATTGAAAACATTCGATGCTCCACTAGACTCACATACACG
TATATGCAAATTCCAGGAGCTTTGTATGTCTTACGTGCGCGCCCTTCAGA
ATGCTCCGTGGCACCGAGGCAGCAGCAGCACTAGCTGGAGAGAGTTTACC
CCCCAACTCCTCTCTCCCAGTTCCCCCTGTAGTAGCTCACAAGTGTTCCA
ACACGATAAGAGGGGCATTCAACGATATAATCCTGAAAAACAAAGGGTTT
GGTGGAGGAATATTGAGGATTGAATCTCTTGCGCGCGGCCTGTTATGGGA
AGGTAGTTGGGGTAAGGTGCAACACTCAAGCAAAGAGGAGGATATGACGC
CCTCAACCCGGTTTGAGATCGCTAGCATTACCAAGACCTTTGTTGCTTCT
ACTCTCATGCTCCTCCTGGCCCGCCACTCACTGTCTGACTTTAGGACTAA
TTCCAATCTTGATTTCTCCGCCAATTTTTCAACCTCCTGTACAATCCCCT
GCCTTCCTCCTTCATCCTGCGGCCCATTGCCCTCACCTTCCTCATCCTCG
GCTCCTTATTACAAAATTCGCCTTTCCTTGGGTCTCGACACCACCCTCGC
CGACGCCGCTCCCTTCCCGTCTTTTCTTTCCTCCCTCTGTGCCCCTCCCC
ACTGGCGCTCAGCCACTCTCCGGAGCCTTCTCTCCCACACAAGCGGCATC
GCCGACTACTGGACCGATCCTTCCTTCCTCATCGCTTTCAGCGAGAATTC
TCACCGAACGTGGAATGCGGATGAAATTTTAAAAGATTATGCAGCCAAAA
TGCCGCCTCTGCCTACTTCTTTTTCCCCTTCCCCCAAGAGATGCTCCTTT
ACCTCCTGCTGTTCCCCCTCGTCCTCCTCCTCCTCTTCTTCTTCCTCCTC
CCCTTCCTCTTCTTTCCCCTACGCCTACAGCGACACAAACTACGTCCTAA
TCGGCCAGCTTATTGAAGCATGGACAGGCCAAAAGCTGCACACAGTCATG
AACGAGACTCTGTTCCTGCCGCTTGGCTTGGCGGACACGTACTTCCCCTA
CCTGCAATCTTCTCCCTCTTTCTCACCTTTCCGTGCACGAGGGGCGGGAA
AAAATGCAAGGGGGAAATCTGGAGGAGGCTCCTCTACCAAAAGAAGACCA
GGTAATGAGAGGATTGATAAAGAAGCCAAGAAGGAGCGGTTGCCGAAGAA
GGACGAGCGAGAGGCGCCCTCGCCGTCCGAAGGAGGCAACGAGGTGGGTA
AGAAAAATGGAGCAAGGCTTCCAACGGCCGGGCCAATACTTTCCCATCGA
TATGAAAGCGAGGAAGATCTGGTCAACGTGCCTCGTCAATCGGCAGATTG
GGCCGGAGGGGGCCTTGTGTCGTCCGCCCAGGATCTTACCCTGTTTGCGA
GAAAGGGGCTGCTGGGAAGTAGGAGTGGAGGACGCGAAGGAGTGAGTCTG
GCAGATATCATGATGGCCGAATCGGTATTGACAGGAATGAATGGAGTATG
GTCGAGCTTGGGCTTGTTCGTGATGGATTTGGAGGAGGAGGAGGATGGGG
TGGACGGCAGAATATGGGGACACGACGGATGGGGCCATTCCTTCATGTTT
GTATATGAACCGCCTCAATCGGACCAGCAGCATGCAGAAAGTGATATTCT
CATACTAACAGGGACCGTAAACCAGCAAGATGAGCGGGCTGATCCCTGGC
AGGCGATAATGGAGGGACTAAGATGTATGCTTAAAGCAGGTAACTCCTTC
GACAAAAACGAAAAATTTTGAGGAGGAGAGCCAACGTGGAAAAAGGCAAC
TTCGGCACGTTTTTTCAATTCTTTTTCTGTATTTAAAGCTTCATTATCGT
TATACATTACATACATTACATGCATGGCAGGAGGCATCTGCAAGCTTTAC
GATGCCTTCGAGGTTTTTAGCATATGTCATGAGAAGGAGCATACAATCCA
CAAAGAATATCGTTCTAACAACCAA back to topprotein sequence of rna4291 >rna4291-protein ID=rna4291-protein|Name=rna4291|organism=Nannochloropsis gaditana|type=polypeptide|length=240bp
MGAACTRDAAKHLENPMQPPTLTATHSFPSYNGGYVSNLPLATLLAEATS
RLCVYQNTITLEYVLLPTDADDTVGLGPNWSRLSPALPTQATALDRTSKL
TALRPPPTLPGTPERHTGRLPDLPPSLPPPRPAGPALPAPPPGPPSSTSR
GLKCRVCEREVPTKAMLQEHLNTCLLVADARGQARGSDEGLKVVLGELRR
ILEEKMNVMLHTGPEGGNGGRIGGRKGGRGGGGAKKPHLP back to topmRNA from alignment at CM002463.1:194142..195130+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4291 ID=rna4291|Name=rna4291|organism=Nannochloropsis gaditana|type=mRNA|length=989bp|location=Sequence derived from alignment at CM002463.1:194142..195130+ (Nannochloropsis gaditana)
CCGTACGAATTGCTCAACATAGCCTGTGTATATCTCGGACATATTTGCTT
GCAGAAATAAGTGGAGTTGAGCGTGACGTTGATGACTACTAGCTttcaag
agggagaagagaatcGTCTGCTGGCCTGGACTTTTTAGAGAGGGGTTGGG
ACATTGCATAGACTCGACGGGTCACTCCTCCTTGCGTCTTCCATGCAAGG
TTTCCCGCGTTTGCCCTCACGAGCTACCACCGATCAACCGTTCCTTTCCT
ACCTTCAGGCAGGAAAATGGGCGCTGCCTGCACACGTGACGCAGCTAAAC
ACTTAGAAAATCCGATGCAGCCGCCAACCCTTACCGCAAcccattccttt
ccttcctacaACGGGGGATATGtttccaacctcccccttgccACGCTCCT
GGCGGAAGCTACTTCCCGCCTCTGCGTCTATCAAAACACCATCACGCTGG
AGTACGTCCTTCTTCCTACTGACGCCGACGACACGGTGGGTCTGGGGCCA
AACTGGAGccgtctttctcccgcccttcctacTCAAGCCACGGCGCTCGA
CCGCACTTCCAAATTGACTGCGCTCCGGCCGCCCCCAACACTACCCGGAA
CCCCTGAGCGACACACGGGCCGCCTGCccgaccttcctccctccctccct
cccccacgacctgccggccccgccctgcctgccccgcctcctgggccccc
ctcgtccacgtcccgAGGCCTGAAATGTCGGGTATGTGAACGCGAGGTGC
CGACTAAGGCCATGCTCCAAGAGCATTTGAACACCTGCCTGCTGGTGGCG
GACGCCCGTGGGCAAGCGCGGGGGTCGGACGAGGGCCTGAAAGTTGTCCT
GGGCGAGCTGCGGCGGattttggaggagaagatgaacGTGATGCTGCATA
CTGgtccggagggggggaatggagggaggataggagggaggaagggagga
agggggggggggggggcaaagaAGCCACACCTACCGTAG back to topCoding sequence (CDS) from alignment at CM002463.1:194142..195130+ >rna4291 ID=rna4291|Name=rna4291|organism=Nannochloropsis gaditana|type=CDS|length=723bp|location=Sequence derived from alignment at CM002463.1:194142..195130+ (Nannochloropsis gaditana)
ATGGGCGCTGCCTGCACACGTGACGCAGCTAAACACTTAGAAAATCCGAT
GCAGCCGCCAACCCTTACCGCAAcccattcctttccttcctacaACGGGG
GATATGtttccaacctcccccttgccACGCTCCTGGCGGAAGCTACTTCC
CGCCTCTGCGTCTATCAAAACACCATCACGCTGGAGTACGTCCTTCTTCC
TACTGACGCCGACGACACGGTGGGTCTGGGGCCAAACTGGAGccgtcttt
ctcccgcccttcctacTCAAGCCACGGCGCTCGACCGCACTTCCAAATTG
ACTGCGCTCCGGCCGCCCCCAACACTACCCGGAACCCCTGAGCGACACAC
GGGCCGCCTGCccgaccttcctccctccctccctcccccacgacctgccg
gccccgccctgcctgccccgcctcctgggcccccctcgtccacgtcccgA
GGCCTGAAATGTCGGGTATGTGAACGCGAGGTGCCGACTAAGGCCATGCT
CCAAGAGCATTTGAACACCTGCCTGCTGGTGGCGGACGCCCGTGGGCAAG
CGCGGGGGTCGGACGAGGGCCTGAAAGTTGTCCTGGGCGAGCTGCGGCGG
attttggaggagaagatgaacGTGATGCTGCATACTGgtccggagggggg
gaatggagggaggataggagggaggaagggaggaaggggggggggggggg
caaagaAGCCACACCTACCGTAG back to top
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