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Properties
| Property Name | Value |
|---|
| Product | phosphoglycerate kinase |
| Orig transcript id | gnl|cribi|Naga_100410g3.2056.mrna |
| Orig protein id | gnl|cribi|Naga_100410g3.2056 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:156333..159096 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4277 ID=rna4277|Name=rna4277|organism=Nannochloropsis gaditana|type=mRNA|length=1183bp
ATGCGCCATGCGACCCACACGTCCCTGTATCTCGGCGCATACCCGTACCT
AAACACAGGAGCCATGTCTCTGAGACGGAGACCACCAAGTCTCGTTGCCC
TCCTAATGTGCCTTTTGACCACGCAAACACTCGCCGGTTGTCGTGTAAAC
GGAGATCAAGATGCATCCTCGCGCACAATTTCCCGTGCCTTTCTGCGCAC
GCATTGCCCGTCGTTTGTTTCGCTTCAGGGGGGAGCGAGAAAAGATTTTT
TAGACCGTCCTGAGGCAACCTACAGATTCCAAGGAGGACTCGGCGGAGAT
GCTTTAATTTGCCATCAAGGAGAAGGACGATGGCGTTCCTTTTCACGCAG
GGATAGCAACGACAGTGGGCAACATTTTCCTAAAGATAAGGCGCCTCGCG
GTAGCAACTATCCTCCGCGCAGGGGGGGGCGGACCTCGGACGGTGCAAGT
AATCACCGGAAAGGCAGCTCTGACGAGAATGGGAAGGACTCTCCCGGCCC
CAACGACACACGGGGCCAAGGCCTCCGGAAAGCACTTTCGACCTTGACGG
GATTGCGCGGTCGTCACCTCGCTTCTCCCACGTCCCGTGTGGCCCATCCA
AAAAACCCTCCAGGTCCCTCCACTCCCCCCCCCCAAAGGCCGCCAAAAAG
ACCCCCGTCTCCCACTCTCCCCACGGCCCCACAACCCGCCTGAACAAGAT
ACTGGCCCACGCAGGCGTCGCTTCCCGACGGGGGGCAGAAGCCTTGATAG
CGGCGGGGAAGGTGGAAGTGAACGGGGTCGTGGTCAGGGACCTTGCCTGC
CAGGTCGATCCGGTCATGGATACGGTCGTGGTGGAGGGCCAAAAACTGTC
GTTGGTCGCCCGGAAACCCTACGAGGTGGTCTGGATGAAGGCGCACAAGC
CCAAGGGCACCCTCTCCTCGGTCCACGACGCAAATGGCCGGAAATGTTTG
GGGGATTTGGGGGAAGAAGTCGGGGCGAAACGGCTGTTGCCGGTGGGGAA
ATTGAACCGGGAGACGGCAGGCTTGATCCTCCTCACGAACGATCACGAAG
GGATCCATTTGCTCTCGCACCCATCCTCCGGGTATGTGAAAGTCTTCAAG
GCGGTGGTGGAGAAAGGGATGCCGTCTGCGCATGCCTTGCACCTGTTGGC
CAAGGGCCTGGTCCTGGCGGAGGGCGGGGAGGA back to topprotein sequence of rna4277 >rna4277-protein ID=rna4277-protein|Name=rna4277|organism=Nannochloropsis gaditana|type=polypeptide|length=486bp
MIGAPPTLIQILLLLFILTFTTFHSMPMTTVPKKMKITGLVTLLSVASAQ
AFVAPSFFKAPSAGAMTGSAAVAEPVCPSTSRRGVMTMAKKSVGSLADAD
LKGKRVFVRCDLNVPLDGKTITDDTRIRASVPTIEYLASKGAKVLLTSHL
GRPKGKEDKFSLSPVADRLTELLGKKVAFVEDCIGEAVSTAVAGLKEGDV
ALLENVRFYPEEEKNVAEFAEKLAANADLYVNDAFGTAHRAHGSTEGVAK
FLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLIN
KVDKLVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARSLEELAKQKGVKF
ILPTDVVIADKFAPDANSKVVASTEIPEGWMGLDNGPESTKMIQAELADC
KTIIWNGPMGVFEFDKFAAGTSAIAETLAELTAKGATTIVGGGDSVAAVE
KAGLADKLSHVSTGGGASLELLEGKVLPGVAALNEA back to topmRNA from alignment at CM002463.1:156333..159096+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4277 ID=rna4277|Name=rna4277|organism=Nannochloropsis gaditana|type=mRNA|length=2764bp|location=Sequence derived from alignment at CM002463.1:156333..159096+ (Nannochloropsis gaditana)
AATGATCGGCGCACCGCCCACGCTTATCCAGATCCTTCTCCTGTTGTTCA
TCCTGACATTCACCACCTTCCATTCCATGCCTATGACCACAGTTccgaag
aagatgaagatcACCGGCCTTGTCACTCTCTTGAGCGTGGCTTCTGCACA
AGGTAAGCCCTCACAGGACGTGGAGAGCCCGTATTGTGGAGTGTTTTTTG
GATCAGTTGGAACAACGATCGCACACGAACCAGAAAAGCCAATCCATTTC
CGCGACCATTGCCAAGAGGATCAACCTCTACATCTTCTCATCTTTTCGCC
CTACAACACACCCTGCACACAGCCTttgtcgctccctccttcttcaaggc
TCCCTCTGCGGGTGCCATGACAGGCTCTGCTGCCGTAGCCGAGCCGGTCT
GCCCTTCCACGAGCCGTCGCGGCGTGATGACCATGGCCAAGAAGAGCGTG
GGCAGCCTCGCGGACGCCGACCTCAAGGGAAAGCGCGTCTTTGTCCGTTG
CGACTTGAACGTCCCCCTGGACGGAAAGACCATCACGGATGACACCCGCA
TTCGGGCCTCGGTGCCCACCATTGAGTACCTGGCTTCCAAGGGCGCCAAG
GTCCTCCTCACGTCCCACTTGGGCCGACccaaaggcaaggaggacaagtt
ctccctttcccccgtggCAGACCGACTGACGGAATTGCTGGGCAAGAAAG
TCGCCTTCGTGGAGGACTGCATTGGAGAGGCTGTGTCCACGGCTGTGGCC
GGcctcaaggagggggacgtggcCCTGTTGGAGAACGTGCGGTTctaccc
ggaggaagaaaagaacgTGGCGGAATTTGCCGAGAAATTGGCGGCAAACG
CCGATTTGTACGTAAATGATGCCTTTGGGACGGCCCACCGAGCCCATGGT
TCcacggagggcgtggccaaATTCTTGAAACCGGCCGTGGCGGGTTTCCT
CTTGCAAAAGGAGCTGGACTACCTCGACGGAGCGGTTTCCCAGCCCAAGC
GCCCTTTTGCGGCCATCGTGGGGGGGTCTAAGGTAGGTGCTTGTtctagg
gggggggggagaggggggaagggaaggctgGCTGGTGTAAGTAGGGTACG
AAAATTGGAGGACAGCGAGGCACTGGATGCTCCATGTTTTACGGGTGCGA
CTCCTGTCATCGGAAGGGAACGGACGGGTGGTAGCACGTGCTTTTCCGCC
TGCGAATATGATGGAgtccgcccccgccgaccccccctttccctttcctc
cctccaccgtccccaGGTCTCCACCAAGATCACAGTCATCGAGACCCTGA
TCAACAAGGTGGACAAGCTCGTCATCGGCGGTGGCATGGTCTTCACTTTC
CTCAAGGCCCGTGGGCACAACGTGCGTACTTTGGCCTCCAGATTGCTTTG
GGcgtgggggaaaggaaggggaaggcagggttTGAGCAGCACGagcacgt
cttcttccctcttgcaTGCAGATTGATtgactcccctcccctccctcttt
gccccccccccttcccccaggtCGGAGGTTCCTTGGTCGAAGAAGATAAG
CTGGACCTGGCGCGTAGTCTGGAGGAGCTTGCCAAGCAGAAGGGCGTGAA
ATTCATTCTGCCCACGGACGTGGTGATCGCGGACAAATTCGCCCCCGACG
CCAACAGCAAGGTGGTGGCTTCCACGGAAATCCCCGAAGGCTGGATGGGC
CTGGACAACGGCCCGGAGTCGACCAAGATGATCCAGGCGGAGCTGGCGGA
TTGCAAGACCATCATTTGGAACGGGCCAATGGGGGTGTTTGAGTTCGACA
AGTTCGCGGCGGGGACGTCGGCCATCGCAGAGACCTTGGCGGAGCTGACT
GCGAAGGGGGCGACCACCATCGTCGGGGGTGGGGACTCGGTGGCGGCGGT
AGAGAAGGCCGGCTTGGCCGACAAACTCTCCCACGTTTctacgggggggg
gcgcttcGTTGGAGCTCTTGGAGGGCAAGGTCCTGCCGGGTGTGGCGGCG
CTGAACGAAGCCTAAGTCTGCGTAGATTCGAATGGTCAGGCGCGAATAAA
GGACGGAGCTCCAGCGTCCCGGTAGTCTCTCTTTCTTGggtgtggggagg
gtgggaggggagagacgTGCCTAATGGTTGCTCTGACATGGACGTTGCAG
CAGTTACGATACACTCTTTGCGTGAACGTGTCTTAGGGCGGCAGACGGGG
TAAGCGAAGGCGGGAGGCCTGATCTTCCTGCCCTCAATCCACTGAGTCCC
ACCCTTGCCTAAGGGGAAGGGTTGATCAGCGTGATTGCACGGCTTCATGT
CATGTTTGAGATGGGTTTTGCGTGTGTTTGGATGTCCTCAATGTATGTGC
TTGTGTGTGCGGTGGCCTCGGAGGCCCGGAGACACCTGGGAAGTCGCTTT
CAAGGCTgaatttggcgcgaaagccGAGTCATCCCGGTCAATTGGGCCAC
AGAACAGGAAGGTCAGAGTAGAGGAAAGAACATCACATCTTTGGTTGCGG
CATAGGCATGTCTGAGAGCTTGGTCCGCTTCGAGGTCCAAGCCTGTGACT
GTCGAGGCAGGAAGCGTCAGGCCTTCGTGAGACCCACATACAAAAGCAGG
GTGCGCCTTGATGCTTTCATTTACTTGGCCGCACCAGCTCCTGCGTCATA
CAATCATCATCGCCTCCTCAATCCACACTGCTACTTTTTCCCACCTTGAA
TACCATCCCAACACTTAGAATCcagtcttccctcctcatgaCTCTGCCCA
ATCCAGTGGTCCCC back to topCoding sequence (CDS) from alignment at CM002463.1:156333..159096+ >rna4277 ID=rna4277|Name=rna4277|organism=Nannochloropsis gaditana|type=CDS|length=5844bp|location=Sequence derived from alignment at CM002463.1:156333..159096+ (Nannochloropsis gaditana)
ATGATCGGCGCACCGCCCACGCTTATCCAGATCCTTCTCCTGTTGTTCAT
CCTGACATTCACCACCTTCCATTCCATGCCTATGACCACAGTTccgaaga
agatgaagatcACCGGCCTTGTCACTCTCTTGAGCGTGGCTTCTGCACAA
GCCTttgtcgctccctccttcttcaaggcTCCCTCTGCGGGTGCCATGAC
AGGCTCTGCTGCCGTAGCCGAGCCGGTCTGCCCTTCCACGAGCCGTCGCG
GCGTGATGACCATGGCCAAGAAGAGCGTGGGCAGCCTCGCGGACGCCGAC
CTCAAGGGAAAGCGCGTCTTTGTCCGTTGCGACTTGAACGTCCCCCTGGA
CGGAAAGACCATCACGGATGACACCCGCATTCGGGCCTCGGTGCCCACCA
TTGAGTACCTGGCTTCCAAGGGCGCCAAGGTCCTCCTCACGTCCCACTTG
GGCCGACccaaaggcaaggaggacaagttctccctttcccccgtggCAGA
CCGACTGACGGAATTGCTGGGCAAGAAAGTCGCCTTCGTGGAGGACTGCA
TTGGAGAGGCTGTGTCCACGGCTGTGGCCGGcctcaaggagggggacgtg
gcCCTGTTGGAGAACGTGCGGTTctacccggaggaagaaaagaacgTGGC
GGAATTTGCCGAGAAATTGGCGGCAAACGCCGATTTGTACGTAAATGATG
CCTTTGGGACGGCCCACCGAGCCCATGGTTCcacggagggcgtggccaaA
TTCTTGAAACCGGCCGTGGCGGGTTTCCTCTTGCAAAAGGAGCTGGACTA
CCTCGACGGAGCGGTTTCCCAGCCCAAGCGCCCTTTTGCGGCCATCGTGG
GGGGGTCTAAGGTCTCCACCAAGATCACAGTCATCGAGACCCTGATCAAC
AAGGTGGACAAGCTCGTCATCGGCGGTGGCATGGTCTTCACTTTCCTCAA
GGCCCGTGGGCACAACgtCGGAGGTTCCTTGGTCGAAGAAGATAAGCTGG
ACCTGGCGCGTAGTCTGGAGGAGCTTGCCAAGCAGAAGGGCGTGAAATTC
ATTCTGCCCACGGACGTGGTGATCGCGGACAAATTCGCCCCCGACGCCAA
CAGCAAGGTGGTGGCTTCCACGGAAATCCCCGAAGGCTGGATGGGCCTGG
ACAACGGCCCGGAGTCGACCAAGATGATCCAGGCGGAGCTGGCGGATTGC
AAGACCATCATTTGGAACGGGCCAATGGGGGTGTTTGAGTTCGACAAGTT
CGCGGCGGGGACGTCGGCCATCGCAGAGACCTTGGCGGAGCTGACTGCGA
AGGGGGCGACCACCATCGTCGGGGGTGGGGACTCGGTGGCGGCGGTAGAG
AAGGCCGGCTTGGCCGACAAACTCTCCCACGTTTctacgggggggggcgc
ttcGTTGGAGCTCTTGGAGGGCAAGGTCCTGCCGGGTGTGGCGGCGCTGA
ACGAAGCCTAAATGATCGGCGCACCGCCCACGCTTATCCAGATCCTTCTC
CTGTTGTTCATCCTGACATTCACCACCTTCCATTCCATGCCTATGACCAC
AGTTccgaagaagatgaagatcACCGGCCTTGTCACTCTCTTGAGCGTGG
CTTCTGCACAAGCCTttgtcgctccctccttcttcaaggcTCCCTCTGCG
GGTGCCATGACAGGCTCTGCTGCCGTAGCCGAGCCGGTCTGCCCTTCCAC
GAGCCGTCGCGGCGTGATGACCATGGCCAAGAAGAGCGTGGGCAGCCTCG
CGGACGCCGACCTCAAGGGAAAGCGCGTCTTTGTCCGTTGCGACTTGAAC
GTCCCCCTGGACGGAAAGACCATCACGGATGACACCCGCATTCGGGCCTC
GGTGCCCACCATTGAGTACCTGGCTTCCAAGGGCGCCAAGGTCCTCCTCA
CGTCCCACTTGGGCCGACccaaaggcaaggaggacaagttctccctttcc
cccgtggCAGACCGACTGACGGAATTGCTGGGCAAGAAAGTCGCCTTCGT
GGAGGACTGCATTGGAGAGGCTGTGTCCACGGCTGTGGCCGGcctcaagg
agggggacgtggcCCTGTTGGAGAACGTGCGGTTctacccggaggaagaa
aagaacgTGGCGGAATTTGCCGAGAAATTGGCGGCAAACGCCGATTTGTA
CGTAAATGATGCCTTTGGGACGGCCCACCGAGCCCATGGTTCcacggagg
gcgtggccaaATTCTTGAAACCGGCCGTGGCGGGTTTCCTCTTGCAAAAG
GAGCTGGACTACCTCGACGGAGCGGTTTCCCAGCCCAAGCGCCCTTTTGC
GGCCATCGTGGGGGGGTCTAAGGTCTCCACCAAGATCACAGTCATCGAGA
CCCTGATCAACAAGGTGGACAAGCTCGTCATCGGCGGTGGCATGGTCTTC
ACTTTCCTCAAGGCCCGTGGGCACAACgtCGGAGGTTCCTTGGTCGAAGA
AGATAAGCTGGACCTGGCGCGTAGTCTGGAGGAGCTTGCCAAGCAGAAGG
GCGTGAAATTCATTCTGCCCACGGACGTGGTGATCGCGGACAAATTCGCC
CCCGACGCCAACAGCAAGGTGGTGGCTTCCACGGAAATCCCCGAAGGCTG
GATGGGCCTGGACAACGGCCCGGAGTCGACCAAGATGATCCAGGCGGAGC
TGGCGGATTGCAAGACCATCATTTGGAACGGGCCAATGGGGGTGTTTGAG
TTCGACAAGTTCGCGGCGGGGACGTCGGCCATCGCAGAGACCTTGGCGGA
GCTGACTGCGAAGGGGGCGACCACCATCGTCGGGGGTGGGGACTCGGTGG
CGGCGGTAGAGAAGGCCGGCTTGGCCGACAAACTCTCCCACGTTTctacg
ggggggggcgcttcGTTGGAGCTCTTGGAGGGCAAGGTCCTGCCGGGTGT
GGCGGCGCTGAACGAAGCCTAAATGATCGGCGCACCGCCCACGCTTATCC
AGATCCTTCTCCTGTTGTTCATCCTGACATTCACCACCTTCCATTCCATG
CCTATGACCACAGTTccgaagaagatgaagatcACCGGCCTTGTCACTCT
CTTGAGCGTGGCTTCTGCACAAGCCTttgtcgctccctccttcttcaagg
cTCCCTCTGCGGGTGCCATGACAGGCTCTGCTGCCGTAGCCGAGCCGGTC
TGCCCTTCCACGAGCCGTCGCGGCGTGATGACCATGGCCAAGAAGAGCGT
GGGCAGCCTCGCGGACGCCGACCTCAAGGGAAAGCGCGTCTTTGTCCGTT
GCGACTTGAACGTCCCCCTGGACGGAAAGACCATCACGGATGACACCCGC
ATTCGGGCCTCGGTGCCCACCATTGAGTACCTGGCTTCCAAGGGCGCCAA
GGTCCTCCTCACGTCCCACTTGGGCCGACccaaaggcaaggaggacaagt
tctccctttcccccgtggCAGACCGACTGACGGAATTGCTGGGCAAGAAA
GTCGCCTTCGTGGAGGACTGCATTGGAGAGGCTGTGTCCACGGCTGTGGC
CGGcctcaaggagggggacgtggcCCTGTTGGAGAACGTGCGGTTctacc
cggaggaagaaaagaacgTGGCGGAATTTGCCGAGAAATTGGCGGCAAAC
GCCGATTTGTACGTAAATGATGCCTTTGGGACGGCCCACCGAGCCCATGG
TTCcacggagggcgtggccaaATTCTTGAAACCGGCCGTGGCGGGTTTCC
TCTTGCAAAAGGAGCTGGACTACCTCGACGGAGCGGTTTCCCAGCCCAAG
CGCCCTTTTGCGGCCATCGTGGGGGGGTCTAAGGTCTCCACCAAGATCAC
AGTCATCGAGACCCTGATCAACAAGGTGGACAAGCTCGTCATCGGCGGTG
GCATGGTCTTCACTTTCCTCAAGGCCCGTGGGCACAACgtCGGAGGTTCC
TTGGTCGAAGAAGATAAGCTGGACCTGGCGCGTAGTCTGGAGGAGCTTGC
CAAGCAGAAGGGCGTGAAATTCATTCTGCCCACGGACGTGGTGATCGCGG
ACAAATTCGCCCCCGACGCCAACAGCAAGGTGGTGGCTTCCACGGAAATC
CCCGAAGGCTGGATGGGCCTGGACAACGGCCCGGAGTCGACCAAGATGAT
CCAGGCGGAGCTGGCGGATTGCAAGACCATCATTTGGAACGGGCCAATGG
GGGTGTTTGAGTTCGACAAGTTCGCGGCGGGGACGTCGGCCATCGCAGAG
ACCTTGGCGGAGCTGACTGCGAAGGGGGCGACCACCATCGTCGGGGGTGG
GGACTCGGTGGCGGCGGTAGAGAAGGCCGGCTTGGCCGACAAACTCTCCC
ACGTTTctacgggggggggcgcttcGTTGGAGCTCTTGGAGGGCAAGGTC
CTGCCGGGTGTGGCGGCGCTGAACGAAGCCTAAATGATCGGCGCACCGCC
CACGCTTATCCAGATCCTTCTCCTGTTGTTCATCCTGACATTCACCACCT
TCCATTCCATGCCTATGACCACAGTTccgaagaagatgaagatcACCGGC
CTTGTCACTCTCTTGAGCGTGGCTTCTGCACAAGCCTttgtcgctccctc
cttcttcaaggcTCCCTCTGCGGGTGCCATGACAGGCTCTGCTGCCGTAG
CCGAGCCGGTCTGCCCTTCCACGAGCCGTCGCGGCGTGATGACCATGGCC
AAGAAGAGCGTGGGCAGCCTCGCGGACGCCGACCTCAAGGGAAAGCGCGT
CTTTGTCCGTTGCGACTTGAACGTCCCCCTGGACGGAAAGACCATCACGG
ATGACACCCGCATTCGGGCCTCGGTGCCCACCATTGAGTACCTGGCTTCC
AAGGGCGCCAAGGTCCTCCTCACGTCCCACTTGGGCCGACccaaaggcaa
ggaggacaagttctccctttcccccgtggCAGACCGACTGACGGAATTGC
TGGGCAAGAAAGTCGCCTTCGTGGAGGACTGCATTGGAGAGGCTGTGTCC
ACGGCTGTGGCCGGcctcaaggagggggacgtggcCCTGTTGGAGAACGT
GCGGTTctacccggaggaagaaaagaacgTGGCGGAATTTGCCGAGAAAT
TGGCGGCAAACGCCGATTTGTACGTAAATGATGCCTTTGGGACGGCCCAC
CGAGCCCATGGTTCcacggagggcgtggccaaATTCTTGAAACCGGCCGT
GGCGGGTTTCCTCTTGCAAAAGGAGCTGGACTACCTCGACGGAGCGGTTT
CCCAGCCCAAGCGCCCTTTTGCGGCCATCGTGGGGGGGTCTAAGGTCTCC
ACCAAGATCACAGTCATCGAGACCCTGATCAACAAGGTGGACAAGCTCGT
CATCGGCGGTGGCATGGTCTTCACTTTCCTCAAGGCCCGTGGGCACAACg
tCGGAGGTTCCTTGGTCGAAGAAGATAAGCTGGACCTGGCGCGTAGTCTG
GAGGAGCTTGCCAAGCAGAAGGGCGTGAAATTCATTCTGCCCACGGACGT
GGTGATCGCGGACAAATTCGCCCCCGACGCCAACAGCAAGGTGGTGGCTT
CCACGGAAATCCCCGAAGGCTGGATGGGCCTGGACAACGGCCCGGAGTCG
ACCAAGATGATCCAGGCGGAGCTGGCGGATTGCAAGACCATCATTTGGAA
CGGGCCAATGGGGGTGTTTGAGTTCGACAAGTTCGCGGCGGGGACGTCGG
CCATCGCAGAGACCTTGGCGGAGCTGACTGCGAAGGGGGCGACCACCATC
GTCGGGGGTGGGGACTCGGTGGCGGCGGTAGAGAAGGCCGGCTTGGCCGA
CAAACTCTCCCACGTTTctacgggggggggcgcttcGTTGGAGCTCTTGG
AGGGCAAGGTCCTGCCGGGTGTGGCGGCGCTGAACGAAGCCTAA back to top
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