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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100454g1.2639.mrna |
| Orig protein id | gnl|cribi|Naga_100454g1.2639 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:118531..120833 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4265 ID=rna4265|Name=rna4265|organism=Nannochloropsis gaditana|type=mRNA|length=1270bp
TAGGCCTTCACGACTGGTTTAAGGACGGTTGCACCTCCAATTGCGGTTTA
TGGCCGGGAAAGTCCTTTTGTCCAATCGTCCTTACTCGGTGTTACCTCCC
TTACCCCCCCTGTGGGGGGTCCTCGATTTGAGAGAGGGAAGAGGGTTGCT
AAATATTTGAAGACAGAAGGAGCACACGGAGATAAAAAATGGAAGAAGGA
CAAGAAAGGCGGTCCCAAAAAGAAAGTACCGTGTACAGTTGGCGACGGGA
ATCGGGAGGGGAGGGAGGACGAGGGCGGGGGCGCGGGGGGGGGGACCTCC
CGGCTTCCATACGATGCCAGCATCGCCGTTGCCACCCTCGAGCCGAAGAG
GCAGGGTTTCTCCCGCTGCAGGGAGCTCTGTAAGGCGACAGGAATTCGGG
GTGCCCGAGGAAAGGCTGTACGGAGAGGCGTGGGAGGAAGGAAGGAGCGA
AGGAGGTGGGGGAGGAGGAGGCTGGGAAGGCCACAGCTCGTCACATGGAA
GCGACAGCGGGGGCCTTCACGGTGAAGGGCAGCATTATCAGTCCGGCTGG
CGCGACGACACCGCCCTTCCTCCCCCCCTCCCTCTCTCCCTTCCTCCCTC
CTTCTCTCCTCTGCCCCCCTCAGCTTCCCACCGGACTGTACTTTCTCCGG
GTATACTACGAGTGAATATGGAGGAGAGAAGACGGAATAATTTGCCCGGT
GGCATGCATGGGAGTAGTCACAGCAGCAGCAGCCTCAGTAGCAGTACCGG
TGTTCTTGAGAGGCCTTCTGCCCTTCCTCCCTTCCTCCCGCACGCCTCAC
CGTTCGCGCCGCTCTCATCCTCTTCGTTGACGGTTCCTGCCCCCTCCTTG
CCCTCGGAGCAGTCTTGGCCGTCTTTGGGGGAAGGAATCCGGAGAGAGGG
AAAAGGGGGAGGAGGGGGAGGAGGGGGGGGAGGACAGGGAGGAGGGAGGA
CGAAAACGAGCGGTCTTGCCCCACCCTGCGCCAACCTCCTCCTCGTCGTA
TTCTTCAGCATTTCCGATAAGGAGGGAGACGGCGCGAGGAGGCGATGGAG
GAGGAGGCGGAGGTGGAGGGAGGGAGGACAGGTCGGTGTTTTTGAGTGCT
GCCGATTCCCGACAGGGACCTCCCGAGTGGGAGGGACGCCGCTCCCAGGG
GGGTGGCGAGGGGGGGGAAGGAGGACGAGGAGGGAGGAGGAGGAGGGTGG
GGGGGATGTCCTTGTACGATATGCTGATGGCGTCGGAGAGGTCAAGGAGG
TGAGGGAGGCAGGAAAAGGA back to topprotein sequence of rna4265 >rna4265-protein ID=rna4265-protein|Name=rna4265|organism=Nannochloropsis gaditana|type=polypeptide|length=124bp
MMEALHGSTNARPEGGREGGREGGRGGEEKHRSRAGISSLQPHPFFPRQL
LPPPIPTPSLPNARDSSPFIDCYPAHAPPPHFQPHGEQYRELQQLSYQVD
RQNLEASGQDTSSNQDMSREKGDS back to topmRNA from alignment at CM002463.1:118531..120833+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4265 ID=rna4265|Name=rna4265|organism=Nannochloropsis gaditana|type=mRNA|length=2303bp|location=Sequence derived from alignment at CM002463.1:118531..120833+ (Nannochloropsis gaditana)
TCCCTGGCTGCCCTACATGACATCCCGGTGGTTTTCGGCTTGTCGGGACG
TCGGCTAGGGAAGTGCCTGGGGAAGAGCGTGCGGATCACGGTGGTGGGCG
TCCTCTCGGCAGATGGGGCCGTGGAGCGGTTCAGgtaagggggaaggagg
gagagagaaggcggagaacATAGGCGGGGACAGGTGGCGCCAGCCTTTCT
CCTGGAAACGAGGAGtaagcgaggggagggaaggggcaggagggaattTG
TGCGAGCAGGTGGTAGCTGAGCAGGaccggaggggggaaggaaggaggaa
aggagggaaggagggaggggatgacaAAGAGGTCAAGGAAGTGCCTACGA
TGACTGCACGTGCCTAAATCCCTTCACCGCCGTTGCtcgacgcctccccc
ctgacctcctccctccctccttcaccacctcccttccttcctcatctccc
cgtccctccctcggctccctcccttgccaggGAAATCACGCGCCAGGCCC
GCGAGCTCTCGAGGTCGCAGGGGACGTGCCAGGAGAGGGCTggggcaggg
gtggaaggcGGCTCCGTCAACaattcccctcccttctcttttccctccta
ccaTGGCTCCATCGGCCCGCaggaccctcccttccctccctccctccctc
cccccgtcacCATCTCGACCTCGGATCACGCCAATCGCTCTGTGCGTGGT
GATGCCTCTTTATCGATGATGGAGGCTTTGCACGGTTCTACGAACGCCAg
accagagggagggagggagggagggagggagggagggaggggaggagagg
agaagcacCGCAGTCGCGCgggcatctcctccctccagccccaccccttc
ttccctcgtcagctgctgcctcctccgatacctaccccttcccttccgaa
TGCACGGGACTCGAGTCCCTTTATAGACTGCTATCCCGCGCACGCTCCAC
CCCCACACTTCCAGCCACATGGAGAACAATACCGCGAGCTTCAGCAGCTG
TCATATCAGGTCGACCGGCAAAATTTGGAGGCATCAGGGCAAGACACGTC
ATCCAATCAAGACATGTCtcgggaaaaaggggatTCGTAGGTCCTTCCCA
GGAAAGAGCGtccaggaggcaggagaagggaaggctACGGAGACTCCGGC
GGAGCACCTTCGTGGGCCTGGGGTCCTAGGCCTCGCGCTGCGATACTTAT
AGTCCCACATTactttgccttttcccccctcgcctttcgtACGAGTATCC
TTGGTGATTCATTCGAGCTGGTGAAGACTAGATCAGTAAGCAGATTAGAA
TCCGCTTGTATGAACATATGTCTCTTGGTGTCTCAAGTGTGTTTGATATT
CTTGTATTTACATTTTTTGGGTTCGAAGCCGTCACTTGTTAGAATTTAAA
TTGTTTCTGATTGAGTAACATGTTAGAAATGCGAATCCTTGACAAGGCAA
AGTTGTTTATGTATTTTTCTATTTAGTTGCAGAAAATTTGAAATCCGTTT
TCGGGAGATGTGTTGCTTTTAGACTTAGAAATACGACGGCAGCTTGGCtg
cagaggaaaaaaaagttGACGTGGCCAAAATCCAGGCGGTCGGGAACGAG
TCGGCTTTGATGGCTTCGCTACGCGATACATGTAGCATCCTCTAGGAGAT
GCCCAAAAGTGGCGTATTATAGATAGGCCACTGGGAGACCTTGAGTTCAA
ACCCGATAGAGGAGAACGGCGACCGTGGTGGTGCTGAGCAAAGCAAGCGA
TAGGAAGCCTTTTTGATTTTAGAAACCCCGATATTTGTTTACAAGAAGAG
TCATTGGCATGGAATGTACCGCGAGCCTTCTAGTTACTGTCTGCAGAATG
GACCACATGTCTTAGGACAAGCAGGATTGCGGGATAAAAGGGCGATCGTT
CGAGTTTCGAGACGCCGCAGGGTACAAGAGAGAGGTAGCTTGCAAGTTTT
TTAGCTTTTGAGCAAGAGataagaggaggacaaggacgatTTTGTGTGCT
TGAGGTATCGGTTATTGAATTGTTGAAGGCGCCCGTGACTTCTCCACATT
GGCAACTCGACCCCGCGAGCCCGAAAACGATACACAAGTGTAATAACATT
GGCCCTCTTCCCGCAAGGAGTGAACAAGCAATCGATGGCCGAGTAAGAAG
TAAATTTTGAGATCAAGCAAAAACCAGCCAATGATGGGAAAACGAGAGAG
CGaatgggagaagagggatggACGAAAATGAAACCACTGCGCAAGGATCT
CTTGAACCCAAAAAGCAGAAATTGCGAGCAGGACGATGCCGGACATGGTA
CCA back to topCoding sequence (CDS) from alignment at CM002463.1:118531..120833+ >rna4265 ID=rna4265|Name=rna4265|organism=Nannochloropsis gaditana|type=CDS|length=375bp|location=Sequence derived from alignment at CM002463.1:118531..120833+ (Nannochloropsis gaditana)
ATGATGGAGGCTTTGCACGGTTCTACGAACGCCAgaccagagggagggag
ggagggagggagggagggagggaggggaggagaggagaagcacCGCAGTC
GCGCgggcatctcctccctccagccccaccccttcttccctcgtcagctg
ctgcctcctccgatacctaccccttcccttccgaaTGCACGGGACTCGAG
TCCCTTTATAGACTGCTATCCCGCGCACGCTCCACCCCCACACTTCCAGC
CACATGGAGAACAATACCGCGAGCTTCAGCAGCTGTCATATCAGGTCGAC
CGGCAAAATTTGGAGGCATCAGGGCAAGACACGTCATCCAATCAAGACAT
GTCtcgggaaaaaggggatTCGTAG back to top
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