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Properties
| Property Name | Value |
|---|
| Product | mannose-6-phosphate isomerase |
| Orig transcript id | gnl|cribi|Naga_100003g59.1782.mrna |
| Orig protein id | gnl|cribi|Naga_100003g59.1782 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1050842..1052720 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna423 ID=rna423|Name=rna423|organism=Nannochloropsis gaditana|type=mRNA|length=2335bp
AAGAGCCCCCCAGGGGAGGAGTGGGTGCATGAGCTTCATTGAAGTGTCCA
TGGTAGCTGAGGCGATTCTACATGCATTGTGAAACCTCTCACCACCACCC
CGTGACAAAACACAGCGGCGTCCACTCTCGCCCCTCGTAGTCCGCATTGA
AGTGCCCTCTGTCAAGCCTACTACAGTCCGAGGCGCAGCGACTCATCTGG
GCAAGCATCCTACCCAGCCCAAGGTTATTTACCCATCCGGGAAGTACGTT
GTTGTACGCGATTTGGAGCAATCATGTGATTTCTATGTTTATCGTGGGCA
CAACTCGAAGGTTACCGTGGCCAAGTTTTCACCCAATGGGTGCTGGGTGG
CCTCCGGAGATGCCTCGGGCAAGGTCCGGATTTGGTCCTACGACAACCCC
GAGCACGTGCTGAAGCTGGAGGTGCAAGGGGTTGGGGGTGGGGAGGTCAA
GGACTTGGACTGGGACCCTGAGAGCCAGCGCGTCGTAGCAGTGGGGGAAG
GGCAGGGGACGAACGCCAAGGTCTTCATGCGGGACACGGGCACCTCCTTG
GGCGAGTTGAACGGGCATGGGAAGCGGGTGATATCCACGGCGTACCGACC
CTGCCGTCCGTTTCGATTAGTGACGGCCAGCGAGGACACGCGCACTGTCT
TTTACCATGGCCCCCCCTTCCGGCTCGAGCACAGCAATGCGGAGCACACC
AACTGGGTGAACACGGTCCGCTTCAGCCCGGACGGGGCCCTCTTCGCCAC
CGCCTCCTCCGATCGAAGGGTCGTGCTGTACGCAGGAGCGACGGGCCACC
CGGTGGGCGACTTGGACAAGGACGGGCGATGCCCCCACGCCGGCTCGGTC
TACTCCTTGGCCTTTAACCCGGACGGCTCCCGCCTCGCGACCGCGTCGGC
GGACAAAACAATCAAGGTGTGGGCCACGGGCAGCCGGGAGATGGAAGTGG
AGCTGCCCTTCTCGCGGGAGAACGAGCTCGGCGAGATGCAGACAGGCGTC
CTCTGGCTGGGCCCTTCGGCCTTGCTCTCCCTCTCCCTCAGCGGGGACCT
GAGCGTGCTCGACGTGAGCCCCGGAAAGGCTGCTCGGAGGAACACGCTGC
AGGGGCACCAAGTGAGCGTGACCTCGCTGGCGGTGGACCTGGACGGGGAG
GCCTTCTACACGGCCTCCTACGACGGCGTGGTCCTGGCGTGGGAGGCGCG
CACGGGGTCCGCCCGCCGCCTGGGGGGCCCTGTGCCGCGGACGGTCAACT
CGGCCAACCACACCGGGAAGGTCACGGGCCTGGCACTGGTTCGAGGGGGG
CGGCGGCTCCGGAGCGTCGGCTTCGACGACAGGTTGCGGACGGCCAGGCT
GGAGGTGGCGGGGCAGGGGGGCCCGACGGGGACCTACGAGGGAGATGCGG
AGGTGGTGCTGCCCGGACAGCCCGTGACGATCGCGCGGGCGGGTGGGGCC
AGCGACTTGGTCACGGTCATCTGCCAGCCTGCGGTCCTGGTAGTGTACAG
GGACGGGGCACTCGCGCTGACGATCGAGAAGTTGCCGTGCACGCCGTCCG
CGCTGGCCATGTTTGGAGAGGACGAGGTGGCCGTGGGCGGCGAAGATTGT
AAAGTCTACGTGTACGCGCTGGGGGAGGCGGAAAGCGCGTCGAAGGGCGC
GAAGGCGGTGCTCGGAGGGCCCCGGGGCGCAGTCTCGGCCTTGGCGTACA
GCCCAGGGGGGGGGTACTTGGCAGTGGGCGACAGCAACCGGGAAATAACT
ATATTTGAGAGATCGACCGTGGACTTGGAGAAGGGAAGAGAGGAATGGGA
CAGGAAGGTATCGGGACAATGGGTGCACCACACCTCTCGGATCACGGCAC
TGGCCTGGTCCCCCTCGGGGCGCTACCTCGCAAGCGGGTCCTCCGATACC
CACATAATGGTCTGGAGCCTCGACGGCTCCTTTCCTCGTAGCCGAGTAGC
CACGTTCGAATCCGCGCACAAGGATGGCGTGACCGTGCTGGACTGGTTGA
CCGAAAGCGACCTGATATCGTCGGGAAATGACGCGGTAATTTGTGTTTGG
GATGTGGCTAGCGCCACGCGGGCATGATGTACGGTCAAGTATCGAACAAA
ACAACAAATAAACATCTTTCTTTGGACCGATGAAATGAGTAGCACTTAGG
TCACGTCGATGGTCTTAATTCTTTCACCTTCTCGATCTTGCACCTATGAA
TTGTTTATATGTTATCTATTATGGAAACAAATGTAAAACTGACTGGTATC
GACCGAAGGACTGCTGCGTGAATGGGTACATTCTATATATATTTATTTTC
ATCAATAAATAACGAAGATAATTACAAAAACATAG back to topprotein sequence of rna423 >rna423-protein ID=rna423-protein|Name=rna423|organism=Nannochloropsis gaditana|type=polypeptide|length=449bp
MLRLECAIQTYDWGKPGLESAVAQLKQEGDDHFEAQQDTRYAELWMGTHP
SGPSTVIVPAGPKKILLKDYLDAHPEATGSASVAGGDLPFMFKVLSIAKA
LSIQAHPDKRRAEELHATRPQVYKDANHKPEMAISLTPFEALCGFRPLAE
LLSHFSSFPEFKALVDSDLVNALAMVAEGSGKEVEAKEALRKVFSSYMEA
PEERAMAELSALVARLERKQEIERDAGEAHDPLESLILRLKAHYPGDRGV
LCPLFLNYVRLGPGKAFVMEANEPHAYLSGDILECMACSDNVVRVGLTPK
YRDVPTLLEMLTCASGAMAVTEGEVLAKQEGQEHRLFSPGASIPEFEVET
IKLEKTTGGCSAPFAWKGVDGPSLLVVLEGAGEAEEVRGSTARLSARRKT
ELSERALSLHKGQVFLVPANTGLAMTSSRTSQRLYVALAHANFHGCPAV back to topmRNA from alignment at CM002455.1:1050842..1052720+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna423 ID=rna423|Name=rna423|organism=Nannochloropsis gaditana|type=mRNA|length=1879bp|location=Sequence derived from alignment at CM002455.1:1050842..1052720+ (Nannochloropsis gaditana)
GGCAGGCCCCTTTCAATCGTAATTTGTGTAGTTGGAGGGCCTTAATCCCT
CTAACCTCAAGCATATCAAACTGGCGTCTCCGGGAAGAataggagaagaa
gcggcgcAGTCTCCGTGCAAGACCCAGGAGTTACACACCGGAGAACAATT
ATCTGAGCAGCGGGCAGCTTTAGCACAGGATCCCCCCATGCTGCGGCTCG
AGTGTGCCATTCAGACATATGATTGGGGCAAGCCAGGATTAGAGAGCGCC
GTGGCGCAGCTCAAGCAAGAAGGCGATGACCATTTCGAAGCGCAGCAAGA
CACACGATACGCCGAGCTTTGGATGGGAACGCATCCAAGCGGACCTTCGA
CAGTTATTGTACCCGCGGGTCCCAAGAAAATCCTCTTGAAAGATTACCTG
GACGCCCATCCCGAGGCCACGGGGAGCGCGTCTGTGGCAGGTGGGGACCT
CCCCTTTATGTTCAAGGTCCTCTCAATCGCGAAAGCCTTGTCCATTCAAG
CTCACCCCGACAAGCGCCGTGCGGAAGAGCTGCACGCGACCCGGCCGCAA
GTGTACAAGGACGCGAACCACAAGCCGGAGATGGCCATCTCCCTGACGCC
CTTTGAGGCCCTCTGCGGCTTCAGGCCCCTGGCAGAGCTCTTGTcgcatt
tctcctccttcccggaaTTCAAGGCCTTGGTGGACTCTGACTTGGTCAAC
GCCCTGGCCATGGTTGCGGAAGGGAGTGGGAAAGAagtggaggcgaagga
ggcgctgAGGAAGGTGTTCTCGTCGTACATGGAGGCCCCAGAGGAGCGGG
CGATGGCCGAGCTCTCAGCCTTGGTGGCGCGCTTGGAGCGGAAGCAGGAG
ATAGAGAGGGATGCAGGAGAGGCGCACGACCCGCTTGAGAGCCTCATTTT
GCGGCTGAAGGCGCATTACCCGGGGGACCGGGGCGTCCTGTGtccgctct
tcctcaacTACGTCCGGCTGGGGCCCGGGAAGGCCTtcgtgatggaggcg
aaCGAGCCGCACGCTTACCTCTCGGGCGACATCTTGGAGTGTATGGCCTG
CTCGGACAATGTCGTGCGGGTGGGGTTGACGCCCAAGTACCGCGATGTGC
CCACGCTCCTGGAGATGCTGACGTGCGCGTCGGGGGCCATGGccgtgacg
gagggggaggtgctcGCCAAGCAAGAGGGTCAGGAGCACCGTCTCTTCAG
TCCCGGGGCGAGCATACCAGAGTTTGAGGTGGAGACCATCAAGCTGGAGA
AGACGACAGGGGGGTGCTCGGCTCCGTTCGCGTGGAAGGGCGTGGATGGG
CCTTCCCTcttggtggtgctggagggggcgggggaggcggaggaggtgag
agggTCGACAGCAAGGCTGTCTGCGCGGCGGAAGACCGAGTTGTCGGAGC
GtgcgctttccctccacaaGGGACAGGTTTTCTTGGTGCCTGCCAACACC
GGTTTGGCCATGACGAGCTCACGAACAAGCCAGCGGCTCTACGTCGCGCT
TGCGCATGCAAATTTTCATGGCTGCCCCGCTGTATAGGCGGTGACGCACA
CCGACTGATCAGAGCATTGGCGCGATGAATAGGGGTGACATGGGAAGGGG
GCATGTAGTttagaaggagagggggagtcTCTGGGAGATGATCCTTTACA
GCATGAATATAATGTAACACTTGTGGCGGGGTCAAAGcgcggggagcggg
ggaacCGAAAGAGCCACACAGGGCGTATACATGGTAACGCGGACTCTCAA
CAAAGAAGATGTGGGATGGCACTGCCGACCAGAAACTGAGAGATCGCCTT
CCAAACAATAAAAAGGCTCGAGCGAGAGAAAAGTCGCGTGTTTTAAAACG
GGGTAAAGAATTATCCGGGCATGTAGAAT back to topCoding sequence (CDS) from alignment at CM002455.1:1050842..1052720+ >rna423 ID=rna423|Name=rna423|organism=Nannochloropsis gaditana|type=CDS|length=1350bp|location=Sequence derived from alignment at CM002455.1:1050842..1052720+ (Nannochloropsis gaditana)
ATGCTGCGGCTCGAGTGTGCCATTCAGACATATGATTGGGGCAAGCCAGG
ATTAGAGAGCGCCGTGGCGCAGCTCAAGCAAGAAGGCGATGACCATTTCG
AAGCGCAGCAAGACACACGATACGCCGAGCTTTGGATGGGAACGCATCCA
AGCGGACCTTCGACAGTTATTGTACCCGCGGGTCCCAAGAAAATCCTCTT
GAAAGATTACCTGGACGCCCATCCCGAGGCCACGGGGAGCGCGTCTGTGG
CAGGTGGGGACCTCCCCTTTATGTTCAAGGTCCTCTCAATCGCGAAAGCC
TTGTCCATTCAAGCTCACCCCGACAAGCGCCGTGCGGAAGAGCTGCACGC
GACCCGGCCGCAAGTGTACAAGGACGCGAACCACAAGCCGGAGATGGCCA
TCTCCCTGACGCCCTTTGAGGCCCTCTGCGGCTTCAGGCCCCTGGCAGAG
CTCTTGTcgcatttctcctccttcccggaaTTCAAGGCCTTGGTGGACTC
TGACTTGGTCAACGCCCTGGCCATGGTTGCGGAAGGGAGTGGGAAAGAag
tggaggcgaaggaggcgctgAGGAAGGTGTTCTCGTCGTACATGGAGGCC
CCAGAGGAGCGGGCGATGGCCGAGCTCTCAGCCTTGGTGGCGCGCTTGGA
GCGGAAGCAGGAGATAGAGAGGGATGCAGGAGAGGCGCACGACCCGCTTG
AGAGCCTCATTTTGCGGCTGAAGGCGCATTACCCGGGGGACCGGGGCGTC
CTGTGtccgctcttcctcaacTACGTCCGGCTGGGGCCCGGGAAGGCCTt
cgtgatggaggcgaaCGAGCCGCACGCTTACCTCTCGGGCGACATCTTGG
AGTGTATGGCCTGCTCGGACAATGTCGTGCGGGTGGGGTTGACGCCCAAG
TACCGCGATGTGCCCACGCTCCTGGAGATGCTGACGTGCGCGTCGGGGGC
CATGGccgtgacggagggggaggtgctcGCCAAGCAAGAGGGTCAGGAGC
ACCGTCTCTTCAGTCCCGGGGCGAGCATACCAGAGTTTGAGGTGGAGACC
ATCAAGCTGGAGAAGACGACAGGGGGGTGCTCGGCTCCGTTCGCGTGGAA
GGGCGTGGATGGGCCTTCCCTcttggtggtgctggagggggcgggggagg
cggaggaggtgagagggTCGACAGCAAGGCTGTCTGCGCGGCGGAAGACC
GAGTTGTCGGAGCGtgcgctttccctccacaaGGGACAGGTTTTCTTGGT
GCCTGCCAACACCGGTTTGGCCATGACGAGCTCACGAACAAGCCAGCGGC
TCTACGTCGCGCTTGCGCATGCAAATTTTCATGGCTGCCCCGCTGTATAG back to top
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