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Properties
| Property Name | Value |
|---|
| Product | 66 kda stress protein |
| Orig transcript id | gnl|cribi|Naga_100003g60.1850.mrna |
| Orig protein id | gnl|cribi|Naga_100003g60.1850 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1047834..1050475 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna422 ID=rna422|Name=rna422|organism=Nannochloropsis gaditana|type=mRNA|length=1724bp
CCTGTGTTCAAGCCGCCTGAGAGCAAACATTTTCGACAGACACTTTTGTC
GCGTGGCGGGCTATCAGGTCACTCAACTCGCGGACCAAGCCATCTGAGCA
CGCACCCGTCACCATCCTATCACCCCCCTGATGTGCTTATCCCATCACAC
GTGATGAACAGAGCATCCAGCAGCATCATTACGGATAGCCATGGATGTAA
CCTCGAATGAGGCAATAGCAGCAGCAGATGCTGCAGCGACGGCAGCGGAA
GAAGCGCTTGATGCCGAGATAATGCAGATGTCCTCTGAGGAAATTCGCCA
GCGAATCCGCTTGCTTGACAACGAGATCCGCATCATGAAGTCCGACATCA
CAAGTATCGACGCCGATTCAGAGGGCCAACGTAAGCGTATAAAGGAGAAT
TTGGACAAAATTAAGCTAAACAAACAGCTTCCGTACCTGGTAGGGAACGT
GGTGGAGGTCCTCGACATGGAAGAGGAAGAGGAGGAGGAGGAGGACGGGG
CGGCTGCGGACATCGACTCCCAGCGGAAGGGCGTCTCGGCGGTAATCAAG
ACGTCGACGCGGCAGACGATCTTTCTACCGATCCCTGGTTTGGTGGACGT
CAAGGAACTCAAGCCGGGGGACTTAGTCGGGACCAACAAGGACAGCTACT
TGATCCTGGAGAAGCTCCCGGCCGAGTACGACTCGCGCGTGAAGGCCATG
GAGGTAGACACGAAGCCCTCCGAGGAGTGGGGGGACATTGGCGGCTGCGA
CAAGCAGATCCAGGAGCTCATGGAGGCAGTGGTGCTGCCCATGACGCGTA
AGGATTTGTTTCTTAAGATTGGGGTCAAGCCTCCCAAGGGCGTGCTGCTT
TACGGGCCCCCCGGCACGGGCAAGACCATGCTTGCGCGCGCGTGCGCCAA
CAAGACCAAGGCGGTGTTTCTGAAGCTGGCTGGGCCGCAGCTTGTGCAGA
TGTTCATCGGGGACGGGGCAAAAATGGTGCGGGACGCGTTCGAGCTGGCG
AAAGAGAAGTGCGCGGAAGACGGGCAGGGGGGTGCGATCATCTTCATCGA
CGAGCTGGACGCGATTGGCACGAAACGCTTTGGGGGGGAGCAGTCAGGGG
ACAGAGAGGTGCAGCGCACCATGCTGGAACTCCTCAACCAGTTGGATGGC
TTCACGGTAAACGAGAACATCAAAGTCATCGCGGCCACGAACAGACCGGA
TGTGTTGGACCCCGCCTTGCTGCGTTCGGGGCGCTTGGATCGAAAGATCG
AGCTCCCGCACCCCACAGAAGAGGCGCGAGCCCGAATCATGGAGATCCAC
TCCCGGAAAATGAATGTTGACAAGGAGGATGTGAACTTCGATGAGTTGGC
ACGGTGCTGCGACGATTTCAACGGGGCGCAGTTGAAGGCGGTGTGTGTGG
AGGCGGGCATGCTGGCCCTGCGGCGAGAGGCGGTGGAGATCAAGCACGAG
GACTTCATGGAGGCCATCAGCGTGGTGCAGGCCAAGAAGAAGGGGAGTTT
GGCCATGTATGCCTAGATGATGAGGAGGGGGAACGAGCGCGAGTGTGGCG
TAGGGTGTAGAGGGGGATCGATTGGGGGCCAGGGGCGGGAGGCTGAGCGG
GAGCGACTAAGGTCGGACCCGCAGGAAAAGAATGTTGTCGAGCCGTTTCA
GAACAAAACATAAGTTGAAAGAAAAAACAGCCAGAGAACCCTAAATACCG
CGGTCATCACTTGGCTCGGATTCT back to topprotein sequence of rna422 >rna422-protein ID=rna422-protein|Name=rna422|organism=Nannochloropsis gaditana|type=polypeptide|length=516bp
MRDTGTSLGELNGHGKRVISTAYRPCRPFRLVTASEDTRTVFYHGPPFRL
EHSNAEHTNWVNTVRFSPDGALFATASSDRRVVLYAGATGHPVGDLDKDG
RCPHAGSVYSLAFNPDGSRLATASADKTIKVWATGSREMEVELPFSRENE
LGEMQTGVLWLGPSALLSLSLSGDLSVLDVSPGKAARRNTLQGHQVSVTS
LAVDLDGEAFYTASYDGVVLAWEARTGSARRLGGPVPRTVNSANHTGKVT
GLALVRGGRRLRSVGFDDRLRTARLEVAGQGGPTGTYEGDAEVVLPGQPV
TIARAGGASDLVTVICQPAVLVVYRDGALALTIEKLPCTPSALAMFGEDE
VAVGGEDCKVYVYALGEAESASKGAKAVLGGPRGAVSALAYSPGGGYLAV
GDSNREITIFERSTVDLEKGREEWDRKVSGQWVHHTSRITALAWSPSGRY
LASGSSDTHIMVWSLDGSFPRSRVATFESAHKDGVTVLDWLTESDLISSG
NDAVICVWDVASATRA back to topmRNA from alignment at CM002455.1:1047834..1050475+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna422 ID=rna422|Name=rna422|organism=Nannochloropsis gaditana|type=mRNA|length=2642bp|location=Sequence derived from alignment at CM002455.1:1047834..1050475+ (Nannochloropsis gaditana)
AAGAGCCCCCCAGGGGAGGAGTGGGTGCATGAGCTTCATTGAAGTGTCCA
TGGTAGCTGAGGCGATTCTACATGCATTGTGAAACctctcaccaccaccc
cgtGACAAAACACAGCGGCGTCCACTCTCGCCCCTCGTAGTCCGCATTGA
AGTGCCCTCTGTCAAGGTCAGCAATCCCACCACCACGATGAGCTCGTTGT
CGCTCTCTGCAACGCATCTCGCAAACCCTCACATCAAGATGATGATCGGT
CCCCAGCCTACTACAGTCCGAGGCGCAGCGACTCATCTGGGCAAGCATCC
TACCCAGCCCAAGGTTATTTACCCATCCGGGAAGTACGTTGTTGTACGCG
ATTTGGAGCAATCATGTGATTTCTATGTTTATCGTGGGCACAACTCGAAG
GTTACCGTGGCCAAGGTACACACACGGGGGGTCTGAAACGTTTACAGGGG
GGGATTGGACGAGTATGCGCACTTCGGGGAGGTAGACGGTTTCATGGCCA
CCTTGCCGTGCACGCCATGTAAATGGGCCGACGACGTGACACGTTCAACA
CAAACAATTTGATATGATCTCGTTGGATAGGCGTCGCTTCAAGCATTGAC
GTCACGTGCCCACCGTACTCGCACAAGCACAGTTTTCACCCAATGGGTGC
TGGGTGGCCTCCGGAGATGCCTCGGGCAAGGTCCGGATTTGGTCCTACGA
CAACCCCGAGCACGTGCTGAAGCTGGAGGTGCAAGGGgttgggggtgggg
aggtcaaGGACTTGGACTGGGACCCTGAGAGCCAGCGCGTCGTAGCagtg
ggggaagggcaggggacGAACGCCAAGGTCTTCATGCGGGACACGGGCAC
CTCCTTGGGCGAGTTGAACGGGCATGGGAAGCGGGTGATATCCACGGCGT
ACCGACCCTGCCGTCCGTTTCGATTAGTGACGGCCAGCGAGGACACGCGC
ACTGTCTTTTACCATggcccccccttccggcTCGAGCACAGCAATGCGGA
GCACACCAACTGGGTGAACACGGTCCGCTTCAGCCCGGACGGGGCCCTct
tcgccaccgcctcctccgatcGAAGGGTCGTGCTGTACGCAGGAGCGACG
GGCCACCCGGTGGGCGACTTGGACAAGGACGGGCGATGCCCCCACGCCGG
CTCGGTCTACTCCTTGGCCTTTAACCCGGACGGCTCCCGCCTCGCGACCG
CGTCGGCGGACAAAACAATCAAGGTGTGGGCCACGGGCAGCCGGGAGATG
GAAGTGGAGCTGCCCTTCTCGCGGGAGAACGAGCTCGGCGAGATGCAGAC
AGGCGTCCTCTGGCTGGGCCCTTcggccttgctctccctctccctcagcG
GGGACCTGAGCGTGCTCGACGTGAGCCCCGGAAAGGCTGCTCGGAGGAAC
ACGCTGCAGGGGCACCAAGTGAGCGTGACCTCGCTGGCGGTGGACCTGGA
CGGGGAGGCCTTCTACACGGCCTCCTACGACGGCGTGGTCCtggcgtggg
aggcgcgCACGGGGTCCGCCCGCCGCCTGGGGGGCCCTGTGCCGCGGACG
GTCAACTCGGCCAACCACACCGGGAAGGTCACGGGCCTGGCACTGGTtcg
aggggggcggcggctCCGGAGCGTCGGCTTCGACGACAGGTTGCGGACGG
CCAggctggaggtggcggggcaggggggccCGACGGGGACCTACGAGGGA
GATgcggaggtggtgctgcCCGGACAGCCCGTGACGATCGCGCGGGCGGG
TGGGGCCAGCGACTTGGTCACGGTCATCTGCCAGCCTGCGGTCCTGGTAG
TGTACAGGGACGGGGCACTCGCGCTGACGATCGAGAAGTTGCCGTGCACG
CCGTCCGCGCTGGCCATGtttggagaggacgaggtggccgtgggcggcgA
AGATTGTAAAGTCTACGTGTACgcgctgggggaggcggaaagcgCGTCGA
AGGGCGCGAAGGCGGTGCTCGGAGGGCCCCGGGGCGCAGTCTCGGCCTTG
GCGTACAGCCCAGGGGGGGGGTACTTGGCAGTGGGCGACAGCAACCGGGA
AATAACTATATTTGAGAGATCGACCGTGGActtggagaagggaagagagg
aatggGACAGGAAGGTATCGGGACAATGGGTGCACCACACCTCTCGGATC
ACGGCACTGGCCTGGTCCCCCTCGGGGCGCTACCTCGCAAGCGGGTCCTC
CGATACCCACATAATGGTCTGGAGCCTCGACGGCTCCTTTCCTCGTAGCC
GAGTAGCCACGTTCGAATCCGCGCACAAGGATGGCGTGACCGTGCTGGAC
TGGTTGACCGAAAGCGACCTGATATCGTCGGGAAATGACGCGGTAATTTG
TGTTTGGGATGTGGCTAGCGCCACGCGGGCATGATGTACGGTCAAGTATC
GAACAAAACAACAAATAAACATCTTTCTTTGGACCGATGAAATGAGTAGC
ACTTAGGTCACGTCGATGGTCTTAATTCTTTCACCTTCTCGATCTTGCAC
CTATGAATTGTTTATATGTTATCTATTATGGAAACAAATGTAAAACTGAC
TGGTATCGACCGAAGGACTGCTGCGTGAATGGGTACATTCTATATATATT
TATTTTCATCAATAAATAACGAAGATAATTACAAAAACATAG back to topCoding sequence (CDS) from alignment at CM002455.1:1047834..1050475+ >rna422 ID=rna422|Name=rna422|organism=Nannochloropsis gaditana|type=CDS|length=1551bp|location=Sequence derived from alignment at CM002455.1:1047834..1050475+ (Nannochloropsis gaditana)
ATGCGGGACACGGGCACCTCCTTGGGCGAGTTGAACGGGCATGGGAAGCG
GGTGATATCCACGGCGTACCGACCCTGCCGTCCGTTTCGATTAGTGACGG
CCAGCGAGGACACGCGCACTGTCTTTTACCATggcccccccttccggcTC
GAGCACAGCAATGCGGAGCACACCAACTGGGTGAACACGGTCCGCTTCAG
CCCGGACGGGGCCCTcttcgccaccgcctcctccgatcGAAGGGTCGTGC
TGTACGCAGGAGCGACGGGCCACCCGGTGGGCGACTTGGACAAGGACGGG
CGATGCCCCCACGCCGGCTCGGTCTACTCCTTGGCCTTTAACCCGGACGG
CTCCCGCCTCGCGACCGCGTCGGCGGACAAAACAATCAAGGTGTGGGCCA
CGGGCAGCCGGGAGATGGAAGTGGAGCTGCCCTTCTCGCGGGAGAACGAG
CTCGGCGAGATGCAGACAGGCGTCCTCTGGCTGGGCCCTTcggccttgct
ctccctctccctcagcGGGGACCTGAGCGTGCTCGACGTGAGCCCCGGAA
AGGCTGCTCGGAGGAACACGCTGCAGGGGCACCAAGTGAGCGTGACCTCG
CTGGCGGTGGACCTGGACGGGGAGGCCTTCTACACGGCCTCCTACGACGG
CGTGGTCCtggcgtgggaggcgcgCACGGGGTCCGCCCGCCGCCTGGGGG
GCCCTGTGCCGCGGACGGTCAACTCGGCCAACCACACCGGGAAGGTCACG
GGCCTGGCACTGGTtcgaggggggcggcggctCCGGAGCGTCGGCTTCGA
CGACAGGTTGCGGACGGCCAggctggaggtggcggggcaggggggccCGA
CGGGGACCTACGAGGGAGATgcggaggtggtgctgcCCGGACAGCCCGTG
ACGATCGCGCGGGCGGGTGGGGCCAGCGACTTGGTCACGGTCATCTGCCA
GCCTGCGGTCCTGGTAGTGTACAGGGACGGGGCACTCGCGCTGACGATCG
AGAAGTTGCCGTGCACGCCGTCCGCGCTGGCCATGtttggagaggacgag
gtggccgtgggcggcgAAGATTGTAAAGTCTACGTGTACgcgctggggga
ggcggaaagcgCGTCGAAGGGCGCGAAGGCGGTGCTCGGAGGGCCCCGGG
GCGCAGTCTCGGCCTTGGCGTACAGCCCAGGGGGGGGGTACTTGGCAGTG
GGCGACAGCAACCGGGAAATAACTATATTTGAGAGATCGACCGTGGActt
ggagaagggaagagaggaatggGACAGGAAGGTATCGGGACAATGGGTGC
ACCACACCTCTCGGATCACGGCACTGGCCTGGTCCCCCTCGGGGCGCTAC
CTCGCAAGCGGGTCCTCCGATACCCACATAATGGTCTGGAGCCTCGACGG
CTCCTTTCCTCGTAGCCGAGTAGCCACGTTCGAATCCGCGCACAAGGATG
GCGTGACCGTGCTGGACTGGTTGACCGAAAGCGACCTGATATCGTCGGGA
AATGACGCGGTAATTTGTGTTTGGGATGTGGCTAGCGCCACGCGGGCATG
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