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Properties
| Property Name | Value |
|---|
| Product | fumarate hydratase |
| Orig transcript id | gnl|cribi|Naga_100003g62.1772.mrna |
| Orig protein id | gnl|cribi|Naga_100003g62.1772 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1043776..1045603 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna420 ID=rna420|Name=rna420|organism=Nannochloropsis gaditana|type=mRNA|length=1482bp
AATTTCCTATCCAAGGAAGGACGGGTTGCGCTTCATAGACACGCTGAGCG
GATGCAGTGCGTTCTTTGGAGCGCTCTGCCTGATACACATGGCTTGAAGC
ATCATTTCCTGCTTCGTGGACAGTCTTCAAACTTTGTCGTCTACTTCATT
TTTCTCATTGAGCTGCCATGTCCTTGCCGATTAAGGCACAAAATACATGT
TATGAAATAGGCATGTTTGATTGGACACAAGGAACTCAATTTCGCGCATG
GCTCTATCGAAGTGCGGAAGAATTAGCCGCGCTGCGTGCCAAAGCGCACC
ACTTAGCCAAGCAAGCCATTCATGAGGGGAAAGCTGTTCCGATGCCGCAT
TGTTATGCGTCCCGTCTGAGCCCGGACGTTGGCAAAGGTAGCTCAAGCAC
GACAACAGAGGGCAACCCCTCCAGGAGTCCGAGTGGCCACCCTTCCATGG
ACCCGACCAAGCCAAAGCTAGTTTCGGGCATCAAACGTCCGCGGCCTGAC
GGTGAAGAAGAGACACAGGATGGGCTCTGTTTGGCGTCCGCGAAGGATGG
ACAGATGAGGGAGCTGGACGCATTGGCACCTGAAGACGAAGAAGCGCTTC
TCCAGTACTTCGCCTACATGATACAGGATGCGTGCGGGCACCGGTCCGAG
TCCATTAAACGTGGCCTCCACGTGCAAGCCACAGCGTTGACGTTTTTCAA
ACGCTTTTTCCTCAGCAACTCCATGCTGGATTTCGACCCCAAAGTCGTTT
TGATGGCCTGCGTGTTCCTGGCAGGCAAGGTGGAGTACGAGTACATCCGT
TTGAGCGAGCTCAAGGACGTATTTGGGGAAAAGTATGGGCGGAAGATAAT
AGAGTTTGAGGGATGCTTGTTGCAAGGTTTGGGTTTCTGCCTCAAGGCGT
ATCACCCGTACAATCCATTTTTCGGCCTCATTAACGGGCTTGAAAAGGTG
AATCACGTGAAAAAACTAGGCCTGACACCAGACAGCTTGAGCCGTCTCTG
CACCGCTGGTCAAGAGACCATCGACCTGATTTTACCCACGGATCTCCCAT
TGCTGCACGCCCCAGCTCGCATTGCCCTTGCCGTTTTGGTGACGTGTGCG
GCGGAGTGTGACCTCATGGAGCCCGTGGCCGAGTACCTGTCCTACTGCTT
CGAGGAGGAGGACGAGTACGACACCATTATGAAAGAGGTGGCGCTGATTC
GTCCAGCTGTAGAGGCTGCACAGGAGGAGGTGCCAAAAAGTCCGACAGAA
AGGAAGGAAAGTCGGATAGAGGTTTGGAGGGCTGCCATGACGCGCCTCAA
GAAGGCTGCCAGATGGGGAGGCAAGGGCGAGGGAAAGAAGAGAAAGAAAA
GCAAGGGCGGAGCCGCGGGCGAATGCAATGGTTCCGCGACCGATCTTGGG
AAATATGGCGACGGGGATAAGACCTAAGGAGGCTTAAAAATTCAAAGAAA
GCAGCAAGATACCTCCACCTGGGCATCTCCTT back to topprotein sequence of rna420 >rna420-protein ID=rna420-protein|Name=rna420|organism=Nannochloropsis gaditana|type=polypeptide|length=566bp
MLRSLAGKAVCGPIRYQLSAAFASQAAPPFHYQELFDLSPDTATSYRKLT
SDFVSTFHVNGQIFLKVEPEGLRLLASQAMVDIAHLLRPAHLAQLSKILK
DPEASSNDRFVALELLKNANIASGLILPGCQDTGTGIVIGKRGMQVLTDG
EDEAHLSRGVYDTYTRTNLRYSQVAPLDMFQEKNTKTNLPAQIDLYATKG
DAYNFLFLAKGGGSANKTFLYQQTKALLNPNGLMKFMDEKIKTLGTAACP
PYHLAVVIGGLSAELNLKTVKLASTKYLDFLPTTGNEHGRAFRDLEWEEK
IHQLTQRMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQAK
GKITKEGVFLEELERDVGKYLPDVDEATLEGAEVVKVDLNRPMAEIRATL
SKYPIKTRLALTGTLVVARDIAHAKLLERVESGQGLPEYVKDHIIYYAGP
AKTPEGYASGSFGPTTAGRMDSYVDTFMANGGSFITLAKGNRSKTVTKAC
KTHGGFYLGSIGGPAAILAQNNIKKVEVLEYPELGMEAIWKIQVVDFPAF
VVCDDKGNDFFAKWQV back to topmRNA from alignment at CM002455.1:1043776..1045603+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna420 ID=rna420|Name=rna420|organism=Nannochloropsis gaditana|type=mRNA|length=1828bp|location=Sequence derived from alignment at CM002455.1:1043776..1045603+ (Nannochloropsis gaditana)
ACAGGTACGATGTTGCGCTCCTTAGCTGGTAAAGCTGTGTGCGGCCCCAT
CCGCTATCAACTATCTGCGGCCTTTGCCTCGCAggccgcccctcctttcc
actaCCAAGAGCTCTTCGACCTCTCCCCAGACACAGCCACATCATACCGG
AAGCTTACTAGCGATTTTGTATCCACGTTTCATGTAAATGGACAAATATT
TTTGAAAGTCGAGCCTGAAGGGTTGCGTTTGCTAGCATCTCAAGCAATGG
TGGATATAGCTCACCTACTCCGACCGGCCCACTTAGCTCAATTGTCAAAG
ATTCTCAAAGATCCGGAGGCATCTTCAAACGACCGATTCGTAGCGTTAGA
GCTACTCAAAAATGCGAATATTGCGTCAGGTCTCATATTGCCTGGATGTC
AGGATACGGGCACGGGGATTGTTATCGGCAAGCGCGGCATGCAGGTTCTG
ACCGACGGAGAGGACGAAGCCCACCTGAGCCGGGGAGTCTATGACACGTA
TACGAGGACCAATCTTCGCTACTCACAGGTAGCACCCCTGGACATGTTTC
AGGAAAAAAACACGAAAACGAATCTGCCGGCACAAATAGACTTGTACGCC
ACCAAGGGAGACGCCTAcaatttcctctttcttgccaAGGGTGGGGGCTC
GGCGAACAAAACTTTCTTGTACCAGCAGACAAAGGCGCTACTTAACCCCA
ACGGACTAATGAAGTTCATGGACGAAAAAATTAAAACTCTTGGCACGGCA
GCATGCCCTCCGTACCACTTGGCAGTAGTTATCGGTGGCCTGTCTGCTGA
ACTGAATCTGAAAACGGTGAAGCTTGCCTCTACCAAGTATTTGGATTTTT
TGCCAACGACTGGGAATGAGCACGGTCGCGCATTCCGAGACCTGGAATGG
GAAGAGAAGATCCATCAGCTCACTCAACGTATGGGCATTGGTGCACAATT
TGGTGGAAAGTATTTCTGCCACGATGTCCGCGTGATCCGATTGCCCCGAC
ATGGGGCCTCTTGTCCTGTAGGGATCGGGGTTTCCTGCTCTGCCGACCGG
CAGGCTAAAGGAAAAATCACAAAGGAGGGAGTTTTCCTCGAAGAACTGGA
GAGGGATGTCGGGAAGTACCTCCCAGATGTAGACGAGGCGACCTTAGAGG
GGGCGGAAGTGGTAAAGGTAGATCTTAACAGGCCAATGGCCGAGATCCGT
GCAACTCTGAGTAAATACCCCATCAAGACGAGACTAGCTTTGACGGGAAC
ACTGGTCGTGGCGCGAGATATCGCACACGCCAAATtgctggagagggtgg
agagcggACAGGGCCTGCCCGAATACGTCAAGGACCACATCATTTACTAC
GCCGGGCCAGCCAAGACGCCGGAGGGCTACGCGTCGGGATCTTTTGGACC
GAccacggcggggaggatggactCGTATGTGGACACATTCATGGCGAACG
GGGGCTCCTTCATCACCCTGGCGAAAGGGAATCGAAGCAAGACAGTGACC
AAGGCGTGTAAGACTCACGGAGGATTCTACTTAGGATCCATCGGCGGCCC
CGCGGCCATTCTGGCGCAGAACAACATCAAAAAAGTGGAAGTGCTGGAAT
ACCCTGAGCTGGGCATGGAAGCGATCTGGAAGATCCAGGTGGTGGACTTT
CCGGCTTTTGTGGTGTGCGACGACAAGGGGAACGACTTCTTCGCCAAGTG
GCAAGTgtgagaagaggaggcgcaggcgaGGAAAATTTGACGTGTGCACT
TGATTGCATGAGGCTCCTACAGCTTAGTATGCCATGCCTCGGGATATTTG
AAGAAACCAGAATCCGAGCCAAGTGATG back to topCoding sequence (CDS) from alignment at CM002455.1:1043776..1045603+ >rna420 ID=rna420|Name=rna420|organism=Nannochloropsis gaditana|type=CDS|length=1701bp|location=Sequence derived from alignment at CM002455.1:1043776..1045603+ (Nannochloropsis gaditana)
ATGTTGCGCTCCTTAGCTGGTAAAGCTGTGTGCGGCCCCATCCGCTATCA
ACTATCTGCGGCCTTTGCCTCGCAggccgcccctcctttccactaCCAAG
AGCTCTTCGACCTCTCCCCAGACACAGCCACATCATACCGGAAGCTTACT
AGCGATTTTGTATCCACGTTTCATGTAAATGGACAAATATTTTTGAAAGT
CGAGCCTGAAGGGTTGCGTTTGCTAGCATCTCAAGCAATGGTGGATATAG
CTCACCTACTCCGACCGGCCCACTTAGCTCAATTGTCAAAGATTCTCAAA
GATCCGGAGGCATCTTCAAACGACCGATTCGTAGCGTTAGAGCTACTCAA
AAATGCGAATATTGCGTCAGGTCTCATATTGCCTGGATGTCAGGATACGG
GCACGGGGATTGTTATCGGCAAGCGCGGCATGCAGGTTCTGACCGACGGA
GAGGACGAAGCCCACCTGAGCCGGGGAGTCTATGACACGTATACGAGGAC
CAATCTTCGCTACTCACAGGTAGCACCCCTGGACATGTTTCAGGAAAAAA
ACACGAAAACGAATCTGCCGGCACAAATAGACTTGTACGCCACCAAGGGA
GACGCCTAcaatttcctctttcttgccaAGGGTGGGGGCTCGGCGAACAA
AACTTTCTTGTACCAGCAGACAAAGGCGCTACTTAACCCCAACGGACTAA
TGAAGTTCATGGACGAAAAAATTAAAACTCTTGGCACGGCAGCATGCCCT
CCGTACCACTTGGCAGTAGTTATCGGTGGCCTGTCTGCTGAACTGAATCT
GAAAACGGTGAAGCTTGCCTCTACCAAGTATTTGGATTTTTTGCCAACGA
CTGGGAATGAGCACGGTCGCGCATTCCGAGACCTGGAATGGGAAGAGAAG
ATCCATCAGCTCACTCAACGTATGGGCATTGGTGCACAATTTGGTGGAAA
GTATTTCTGCCACGATGTCCGCGTGATCCGATTGCCCCGACATGGGGCCT
CTTGTCCTGTAGGGATCGGGGTTTCCTGCTCTGCCGACCGGCAGGCTAAA
GGAAAAATCACAAAGGAGGGAGTTTTCCTCGAAGAACTGGAGAGGGATGT
CGGGAAGTACCTCCCAGATGTAGACGAGGCGACCTTAGAGGGGGCGGAAG
TGGTAAAGGTAGATCTTAACAGGCCAATGGCCGAGATCCGTGCAACTCTG
AGTAAATACCCCATCAAGACGAGACTAGCTTTGACGGGAACACTGGTCGT
GGCGCGAGATATCGCACACGCCAAATtgctggagagggtggagagcggAC
AGGGCCTGCCCGAATACGTCAAGGACCACATCATTTACTACGCCGGGCCA
GCCAAGACGCCGGAGGGCTACGCGTCGGGATCTTTTGGACCGAccacggc
ggggaggatggactCGTATGTGGACACATTCATGGCGAACGGGGGCTCCT
TCATCACCCTGGCGAAAGGGAATCGAAGCAAGACAGTGACCAAGGCGTGT
AAGACTCACGGAGGATTCTACTTAGGATCCATCGGCGGCCCCGCGGCCAT
TCTGGCGCAGAACAACATCAAAAAAGTGGAAGTGCTGGAATACCCTGAGC
TGGGCATGGAAGCGATCTGGAAGATCCAGGTGGTGGACTTTCCGGCTTTT
GTGGTGTGCGACGACAAGGGGAACGACTTCTTCGCCAAGTGGCAAGTgtg
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