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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100003g68.1810.mrna |
| Orig protein id | gnl|cribi|Naga_100003g68.1810 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1034222..1035693 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna416 ID=rna416|Name=rna416|organism=Nannochloropsis gaditana|type=mRNA|length=4978bp
ATAAGTGAGCTTACTGCACGCTATCATTGGTGTCGTGCATCATGGCCCCT
TGGTTTGCGTTCGCCCGGACTCACGTCCGTGTGACCGCCAGTCTGGTCTT
CCCACGGCTGTGTCGGAGAGGCGAGAAGCTTCAATTACCGCGTGGGGCAT
GCACGAGGTGTACAGATCGGCGGTCGTTATGCGCGGTACATGCAATTTGC
ACTGGTCAAAACAATTGCGTCCTTCGTTCTCTGACACAGGCTTTACGGTC
CTGAAACCATATTTTCACAGTAGGACCTCCCCTCCCCCTCAAGGCTAATG
GCGAGCAATGGGACCAAGCGGCTCAAGACGGACACCGACGTGCTGCACTT
CTTCCGCGCACCGGGGTACGCGGAGCCCAACATCAAGAAATTAAATTTCA
AGATCAAAGCTGCGCTACCCGAGGTGGAGGCTGTAGAAACTGAATTTTGC
TTCAATGTTCAATTATCATCCACGTCCAATCCCTTGACGGAGCAGGAGCA
AGAGCGCCTCTTATGGATTTTACGGGAGACTTTTGAGCCGACCCACACGC
GGCCCGGCGGCAGTTTCCTTACAGAGGTCTTAGCGGCGGGCAGGGAGGGT
TTGGTAGGCCAGATCTTTGAAGTCGGCCCCCGGTTGACGTTCAGCACAGC
TTACTCGTCCAATGCTGTCTCGGTTTGCGTGGCCTGCGGCTTGACAGGAA
TCAATCGCCTTGAACGCTCTCGCCGGTACCTCGTATGGACAAAGACCGCT
CTGACGGACGCACAGGCCTCCGCATTTCTGGCGCAGGTGCACGACCGGAT
GACGGAGATGCCTTACCCAGAGCCGTTGCAGACATTTGAGACGGGTTTAA
CGCCAAAGCCGACGCAAGTTGTGCCCATCTTAGAAGAGGGGCGATCGGCC
TTGGAGACTCTGAACGGCACGCTGGGGCTGGGCTTCGACGACTGGGACTT
GGACTACTACACGAACCTCTTCACGAACCGCCTACAACGTAATCCCACGG
ACGTGGAGTGCTTTGACATGGGCCAGTCGAATTCGGAGCACAGCCGGCAC
TGGTTCTTCGGGGGGAAAATCATCATCGACGGCGTCGAGCAGGCAGACAC
GCTCTTCAAGATGGTGAAGGACACTTTGCCGAAGGACCGGCCCAATAACA
GCGTCATCGCCTTCTTCGACAACTCTCGAGCGATCCGAGGGTATCCCATC
ACGACCCTGAAGCCGGAGAAGCCCGGGCACCCCTCCAAGATGGTCCCGTA
TAGCAACACCTTCCACCCCACTCTCACGGCTGAGACGCACAACTTTCCCA
CTGGGGTGGCCCCTTTTCCAGGCGCGGAGACGGGAACAGGAGGACGACTG
CGGGACGTGCAAGCCTGCGGTCGGGGCAACGCCACAGTGGCGGGCATGTC
GGCGTACTGTGTGGGGAATCTCCGGATTCCAGGTTATACATTGCCTTGGG
AAGATCCCTCGTTCAAGTACCCGGGCTCGATGGCCTCCCCCTTGAACATC
GAGATCGAAGCCAGCAACGGTGCGTCTGACTACGGGAACAAGTACGGAGA
GCCGGTCGTCTCGGGGTATACGCGGTCCTTCGGGCAGCGACTGCCGAATG
GGGACCGGTACGAGTTCATCAAGCCCATCATGTTTAGTGCTGGGCTGGGG
AACCTGAATGCGTTGCATGCCCGCAAAGAGGAGCCCAAGGCGGGTATGGT
GGTGGTGAAGATAGGTGGCCCCGCGTACCGCATTGGTATGGGGGGGGGGG
CGGCATCGAGTAGGGCCTCGGGAGAGGCGGACGCCGAATTGGACTTCAAC
GCCGTTCAACGGGGTGACGCGGAGATGGAGAACAAGCTGAACAGAGTTCT
TCGCTCCTGCATCGAGCTGGCAGAGAGAAATCCTATCGTTTCTATACATG
ACCAAGGCGCGGGAGGGAATGGGAACGTGCTAAAGGAGATTGTGGAGCCC
CTGGGTGCGTCTTATGACCTGCGGAAAATTCCTCTGGGTGACCCCACGCT
CTCGGCGTTGGAGATTTGGGGAGCGGAGTATCAGGAGAACGACTGCTTCT
TGACCACGAAGGAGGATTTGCCCATGGTGTTGGCCTTCGCCAAGCGGGAG
AACTGCACCATTGCGGCGGTGGGCGAGGTGACGGAGGACGGACGGGTGGT
GGTGGAGGACTCGAAGACCGGGACCACGGTGGTGGACCTGCCACTGGATT
TGGTTCTGGGGAAAATGCCGCAAAAGGAGTTTCCCATGATCCGCGTGCCC
ATGCCCCTCCGCCCGCTCGCGCTCCCCGACGGGTTGACCGCAGAGGCAGC
CCTGGACCGCGTTCTGCGCCTGCTCGCCGTCGGATGCAAGCGCTTTTTGA
CCAATAAAGTGGATCGATCCGTGACGGGACTGGTGGCACAGCAACAGTGC
GTCGGGCCCCTACACATCCCGTTGGCGAATGTGGCCGTTCTGGCTCAGAG
TCACCTCTCCACAACGGGCGCCGCCATCACGTGCGGCGAGCAACCCATCA
AAGGGCTCATCGATCCCGCGGCCATGGCGCGCATGACGGTGGCAGAGACC
ATCACGAACATCATGTGGGCCAAGCTTTCCTCCCTGACGGACATTAAAGT
GGCGGGGAACTGGATGTGGGCCGCCAAGTTTGAAGGTGAAGGTCCCAAGA
TGTACGACTGCTGCAAGGCCCTGCGTGATATTCTGATCGCGATGGGCGTG
GGCATCGACGGCGGCAAGGACTCCTTGTCCATGGCCGCGCGGGTGGAAAG
CGAGGTCGTCAAGTCTCCTGGCAACCTGACCGTCCCCGCCTACTGCACTG
TGAGCGACATCACCAAGACCGTGACCCCTGACCTCAAACGCCCCGACGAG
AGCTCTTTGGTTTTCGTGGAGCTCGATGCCAGCAAGGCCAGGCTCGGAGG
AACCGCCCTGGCACAAGTCTACAACCAGCTGGGCGATCAATCGCCGGACG
TGGAGGACCCCGCGAAGCTGGTTTCCTTGTTCACCGTCACCCAGCAGCTG
ATTGAAGACAGAGCTCTGCTCGCCGGGCACGACCGATCCGACGGTGGCTT
GATCACGGTCCTGTTGGAGATGGCTTTCGCTGGAAACTGCGGCATTGACG
TTGACTTGACTTTACCCGCAGGGGTCGAGCATACGGCACTGGCCACCCTC
TTCAATGAGGAGGTTGGCATCGTCCTTGAAGTCCCGACGGCTGCTGCGGA
CGGCGTGGCCGCCGCTTATGCAGCGCAGGGGCTGGCATCCTCCGTGATTG
GGAAATCGACGAGTGAGAAGAAATGCGTGGTGCGTGTTGACGGAGAGACG
GTGGTAGACGCGAGTATGCCCGTGCTCCGAGACGTGTGGGAAGCCACAGG
GTTCGAGCTGGAAAAGCTACAGTGCAATCCGGAATGTGCGATCCAGGAGC
ACGAGGGCCTTGCCTCTCGTACGGGGCCCACGTGGCATCTCACGTACTCA
CCAGCGCCTACGCCCGTTGCGTTGATGGAGGCGTCCAATAAGCCAAAGGT
GGCCGTTATCCGACAGGAGGGGAGCAACGGCGATCGGGAGATGATTTCGG
CTTTTCATGCTGCTGGGTTTGAAGTTTTTGATGTGCATGTGAACGACTTA
TTGGCGGAGACTGTAGCGTTGGATGCCTTTCAAGGCATAGTTTTTGTGGG
TGGCTTTTCTTATGCAGACGTCTTGGACTCGGCCAAAGGCTGGGCGGCAG
TCTTGAAGTATAACCCGAGTGTGCTGGCACAATTAGAGGCCTTCAAAGCT
CGTCCGGACACCTTTTCCTTGGGAGTGTGTAATGGTTGTCAGCTCATGGC
CCTGCTTGGGTGGGTGCCTTACCCTGACCACAATGTGGCGGAGGCGGCCC
AGCCTCGCTTCATCGAGAATAATTCTGCTCGCTTCGAGTCGCGGTTCAGC
TCCGTGCAAATTCAGCCGTCCGCTGCCATCATGTTCGCCGGCATGGCGGG
GTCGTCCTTGGGGGTGTGGGTGGCGCATGGGGAGGGACGTGTGCATTTCT
CCACGCATGAGACGCAGGATTTCGTGGTAGCCAAGCAATTGGCGCCTATG
AAATATGTTGACGACGACAACAATCCTACGGAAGTCTATCCTTTCAACCC
TAACGGCTCGCCCCTGGGCATCGCTGCACTCTGCTCGGAGGACGGACGGC
ACTTGGCCATGATGCCTCATCCGGAGAGATGCTATCTTGGTTGGCAGTGG
CCGTACTTGCCGCGTGAGTGGGAAGAGAAGGGAATGAGGAGCGGGGTTGG
ACCCTGGCTCCGTATGTTTCAAAATGCTCGTACGTGGTGTGAGACACACA
AAACAACGAATTGAGGAGATGGTATCGGTCCTGGTGATAGGCGCCATCGA
TCCGTCGCAAATCGGACACTGCGGACTCGTGTTGAAGGCTATCGCTTAAC
ACGGTAAAGTAGCATGATTTTGTATTGATGAAATGTGGCTCTCAACTGAA
GACTTGTCCAAGATGTTTGGTAGAGAAGGGCTTGGGGTAGACTCATGAAG
GAGGATGGTGAAGGTGGGATGACAGAAGGAAGTCTGGCGGCTGCGGAGGC
TGCTGGCTTTGAGAAGCGTAAGTCGGTTGTATCCAACTTCAAAACCAGGA
GAACTTGGAAAGTAACGGCTTAATCGACGTTCAAGGACTTATGGCATCCG
ACAACATACATGAGTAGGAAATCGAGGCGATCCGCAGCATGTCGAGCGTG
TTTTCCTCGCGGGATTTTAATTTTCTCGGGAAGTTAGAAACTGGGTGCCA
CGGAGGTTATAGGTGTATGCCGGTATCCCGGGAAGTTTTTGTTTGAAATT
TATTGGTAACTTGAGCGAGGATAGAGCTGTACGCCGTCAAAAAAAAAAGG
CAAAGTAAGTAGACGACAGTAGAAGGATTAGCGGGCCTCGAAGTCATGGC
TTACATGAGTTCTTTTGTCAAAGCTTGACTGGGAAGATTTAAACTATTTT
ACCGCTTCATGCTCTCGCAGCTACGAAA back to topprotein sequence of rna416 >rna416-protein ID=rna416-protein|Name=rna416|organism=Nannochloropsis gaditana|type=polypeptide|length=97bp
MLRALARPFRNGFHGNRLGKKRQLSGLVEKNYFVEEWNGRREITEKTFKF
NSKTVPSLIGLAIVFPGFIYYVMKDELKKKYEKLGYNTEEGGNREMM back to topmRNA from alignment at CM002455.1:1034222..1035693- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna416 ID=rna416|Name=rna416|organism=Nannochloropsis gaditana|type=mRNA|length=1472bp|location=Sequence derived from alignment at CM002455.1:1034222..1035693- (Nannochloropsis gaditana)
GTCGTGTGACTTCCCTTCTGCCTTCCGAGACGAGCGAGGAGAGGGCTGAG
CTACTGAGCTCGGCGCAGTGGCCGCAGATTTCTGTGCTTGAACGCGTTTT
TGTCATGTGCAACCTTTTTTCAAACAATCCCATGCCCTGTTGATAGATTA
GAGCGATAACATGCCAGACATGGGCTCACGTGGGACACGTCTGCGCAGAA
AGCGTCACGACAGGAGTGGAAGACCTGTCCCATGATTATCTTTGGCTTGA
GCCTCTCGATAAAACGGAGGAGTCTGGTATGCCGACATCAGTCCCACGAG
TTTCGTACTTTTCCTCACACGAAAACAGTGGTAGGTCATGCTGCGGGCAC
TAGCACGTCCATTTCGGAATGGTTTCCATGGTAATCGTCTCGGAAAGGTG
AGAATTAGCAGTAGCTCCGAGCCGTGGTATGGAGAAATATGAGATCGGAA
AGTCTCGTTTTCCCTGCTTGTTCTCGAACATTTGAAATGATTTGTGGGTC
TCTGGGGCTCTTATTTTTTCATGCAGCAACAGAAGCGGCAACTGTCTGGC
TTGGTCGAGAAGAACTACTTCGTTGAGGTGAGTGTCAGGGATAGAAGGGG
CTTGATGCCGCGTATCATGCGGTCAGACATTAAACGTAGAGCGCACAGAT
GATTGTAACGCATGGACCATGAACTGGAAAGAAGATAGGGACACAGGTTT
AGGCATGGTGTGGGAGTGTGACGAGGCAAGTGTTGACGAGGTGTTGGTGT
GCTCTAAGCGATACGGCCAGCGACGATCTGATTTCAACGAGCAAGCTTCG
TTCGTCCTGGACACTGTGACCTCCTCCGACTCTCATGTTCCATTCTTTAT
ATGGCCAACAGGAATGGAATGGCAGGCGCGAGATAACCGAGAAGACATTT
AAGTTCAACAGCAAGACGGTGCCTTCCCTCATCGGCCTCGCCATCGTCTT
TCCCGGCTTCATTTATTACGTTATGAAGGACGAGCTGGTACGTCACTGAG
CAGTATTAGAATAGACGGCGATCTTTGGAAAGTGAGAGCGTGTCTGATCT
GGTGCTTCTTTGTCCGTATGTGTCATGCGGAGAATCATGTCTTTTTCGCT
CTTTGTGGCGGTCACAACACCTTACGAGACACTTTATCTATATTCTACAG
AAGAAGAAATACGAGAAACTCGGCTACAATACTGAGGAGGGGGGAAACAG
GGAGATGATGTGAGAAGTGCTAGAGAAGGCAACAAAGAGAAGGGCACTCC
CAAAAATGATTAAAAACCAACGAGGCGCGTCAAGTCACACCCAAGCATCT
TCAATGTCAGTAATGCATCCGCGAGATTTATTTGTCGGTCTGGAACTCCT
ATCGGTTTTTTAATTTTTTTCGCTATTTAATTTCTTCCTTGCATGGCGTA
TCATGTATGATATGGAGATTCGTCCTACAAGTAAATTGATTCCTTAATGT
TTATGGATTAAGAGATACATTG back to topCoding sequence (CDS) from alignment at CM002455.1:1034222..1035693- >rna416 ID=rna416|Name=rna416|organism=Nannochloropsis gaditana|type=CDS|length=1176bp|location=Sequence derived from alignment at CM002455.1:1034222..1035693- (Nannochloropsis gaditana)
AAGAAGAAATACGAGAAACTCGGCTACAATACTGAGGAGGGGGGAAACAG
GGAGATGATGTGAGAATGGAATGGCAGGCGCGAGATAACCGAGAAGACAT
TTAAGTTCAACAGCAAGACGGTGCCTTCCCTCATCGGCCTCGCCATCGTC
TTTCCCGGCTTCATTTATTACGTTATGAAGGACGAGCTGAAGCGGCAACT
GTCTGGCTTGGTCGAGAAGAACTACTTCGTTGAGATGCTGCGGGCACTAG
CACGTCCATTTCGGAATGGTTTCCATGGTAATCGTCTCGGAAAGAAGAAG
AAATACGAGAAACTCGGCTACAATACTGAGGAGGGGGGAAACAGGGAGAT
GATGTGAGAATGGAATGGCAGGCGCGAGATAACCGAGAAGACATTTAAGT
TCAACAGCAAGACGGTGCCTTCCCTCATCGGCCTCGCCATCGTCTTTCCC
GGCTTCATTTATTACGTTATGAAGGACGAGCTGAAGCGGCAACTGTCTGG
CTTGGTCGAGAAGAACTACTTCGTTGAGATGCTGCGGGCACTAGCACGTC
CATTTCGGAATGGTTTCCATGGTAATCGTCTCGGAAAGAAGAAGAAATAC
GAGAAACTCGGCTACAATACTGAGGAGGGGGGAAACAGGGAGATGATGTG
AGAATGGAATGGCAGGCGCGAGATAACCGAGAAGACATTTAAGTTCAACA
GCAAGACGGTGCCTTCCCTCATCGGCCTCGCCATCGTCTTTCCCGGCTTC
ATTTATTACGTTATGAAGGACGAGCTGAAGCGGCAACTGTCTGGCTTGGT
CGAGAAGAACTACTTCGTTGAGATGCTGCGGGCACTAGCACGTCCATTTC
GGAATGGTTTCCATGGTAATCGTCTCGGAAAGAAGAAGAAATACGAGAAA
CTCGGCTACAATACTGAGGAGGGGGGAAACAGGGAGATGATGTGAGAATG
GAATGGCAGGCGCGAGATAACCGAGAAGACATTTAAGTTCAACAGCAAGA
CGGTGCCTTCCCTCATCGGCCTCGCCATCGTCTTTCCCGGCTTCATTTAT
TACGTTATGAAGGACGAGCTGAAGCGGCAACTGTCTGGCTTGGTCGAGAA
GAACTACTTCGTTGAGATGCTGCGGGCACTAGCACGTCCATTTCGGAATG
GTTTCCATGGTAATCGTCTCGGAAAG back to top
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