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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100141g2.8381.mrna |
| Orig protein id | gnl|cribi|Naga_100141g2.8381 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:1010777..1013330 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4159 ID=rna4159|Name=rna4159|organism=Nannochloropsis gaditana|type=mRNA|length=2093bp
TTTGCTGCCTTAGGTAGGACCGCGAGTGCCCTATTGGGGGAGATATTGGA
AGAACGGGGCGGAGATGTCGCAGGCAGGAGAGACGTGCGACGGAGACGGC
AAGCGTTAGAACTGGTCAGAGAAATTGCGCTGGTGGCAGCCGCAGGGGCG
GGGGACTGGCGACGCGCGTTGTTGTTGTTGAGGGAGCGAGAAGCCCTGGG
AGAAGGAGGGGGCGGGGGAGCGGTTGGTGGGCTGGGCTTGAGAGCTCGGT
ACGCATTGGCCATCGAGGCTTGTGCACGCGCGGGCCGATATCGGGAAGGG
TTGGCCCTCTTGGAGGGACGGTCACTGGGCGTGGGGAAGATGGAGGGGAG
GGGGAGGGTGTTGAGCCACGTCTTAGTCTCGTTAAGCAGGGCAGGGCAGG
GTCCCCAGGCTCTGGCATTGAGTAGACGCGCTTTGCGGCCTCCGCTTTCG
TGGGCGAATGACATGAGTCAGCAAGGCTGTGGACGTGTGGATGGTGTTGT
GGACCGGGAGGAGGCTTCCCCCATGTCTGCCCTACGCTCCCAGCGTCTGC
GGGCGTTGCAGGATGAAAGACGTCGGGTCTGGCACCGGTACAACAAGCAG
GACATGTATGAGGGTCTGGTGGAAGCTTCCTCATCGTTGTCCTCGACGGA
AGCACACCCTGCAACTGCCCCGTACTCCGATGCCACTCCACATGGGGAAG
AGCGGGATTCCTCCATCCATAGGCACCTCTCGTGGTCCGCCTGGCAGGAG
TTGGCGAAGGCCGCCAAGGTCTTGGCCAAGGAAAGAGAAAGCGGAGGGAA
GCGAAAACGGAGGAGGAATAGGAAAGCTGTGTCGGAAAGCGGAAACGATG
TGAGGGAAGCTGGAGGGAAAGAAAGCTCTGATCAAGGGGGTGAACTCCTG
TGGGTGTTGAAGGCCATGCTGGAAGCAGGCGTGGCCCCTAGCAGAGGCGA
CTTGGAATGGAGCTTGCAGATGCTAGCGAGTCAAAAGGCATGGGATGCCT
TGGAAGACCTCTTGGAGAAAGCAGCTGCAGTTCACGTGGCCGGAGGAGGC
AAGGACGAAAGTGTTGTTGGGGAAGATGGAAGAGGGGAAGACATGGGCGG
GTCCGGGCGGAGCCAGGACCCGATAAAAAGCACTTGTTTGGACGTGATTG
GATGCAATCGATTATTGCATGCGATGGCGCAAAATGGGGAAGGAGAGCGG
TCGGTGACCTTCCTAAAATTTATGCGAGATCGGATCGGTGTGGTGCCGGA
CATGATCTCGTACACTAGCGCCATGGACGCTTGTGGGAGAGGGGGAGACT
GGCGGGGGGCATTGAACTTATTGGAGACTATCGAAAGAGAAAAAAACAGA
GGAGAAAGAGGCTTGAGGGCCAATTTGATCACCTACACGGTGGTGATGAA
AGCCTGTGCTCAAGCTGGACAATGGCAACCATGCATCGCTTTGCTGGAGA
GGTTAATGAAGAGCGACAGTCAAGGGGCTGAAGAGCCAGAATGTTTGAGA
CCGGATACGATCGCTTGTAATGTTGCATTGGAGGCGTGTGCGCAAGGATT
GCAGCCAAATGCGGCGTTGAGGCTTCTTAAAAAGATGGAGGAAGGGTGGG
ACGGGGTACAGGGGATGTCCCCGGCGCCGGACCAGATTTCTTACACGAAT
GTAATTCGTGCTCTTAGAAGAGGAGGGGGAAATGGGGAGGATGTCGTGAA
GACAGTGCATCAGATTTTACAACGGGCCAAAGCTCGGAAACTGAGACCGG
ACAATAGATTGTACAACAGTGCTTTAAAAGTGTATGTTCATGAAGGCCAC
TGGCGACTCGCAAAAGAGCTACTGAAAGACATGGATCAGAGACAGATGAT
TCCTGATGAGTTTACAGTGCGAATTTTGACACGTGGAAGAGGTAAAGGTG
GAGGAGGGGGGCGAGAGCGCGGGCAGACACTTGCCCTGCTTCGAGACATG
CAAGACCGTTTGGGAGACCTCCAGCACAGTAGAAGACGAGATAATAAAAG
GTACATGATGAGCGCGCCACATTGATGAGTGTGTATACGAAATATAGAGC
TGTAAATGATCGAAATAAAAACAAAGGCGATGTACAGAATGAG back to topprotein sequence of rna4159 >rna4159-protein ID=rna4159-protein|Name=rna4159|organism=Nannochloropsis gaditana|type=polypeptide|length=309bp
MTFKTAGRQQQAGLARQLKSYLRPRHVFSSDLPSQDTSLVHAMGRMAKFC
RFVALVLVLLFNSVVTGEYVRGPLRPESRDLSSTGLDGLTYSADEKHASA
HFPPRLLRPARSQARVQHQVKRDMISSVFLGAALAFVFLAALVVIRCNCA
RVFPCICGEEALAARNELLKDVSRSFMKMKEEEEEEVDIVGEEGGPDGPP
TRVHGSEEALDGQVLDKGRRGGEEEKKEEGAEAMEEKKAPAAPSTTSLSE
WVASLGLLAGQARVRPWAAAKVDDGAQTTGKKGEDRSRGEWEDRTQGGRE
ESKQYSGFE back to topmRNA from alignment at CM002462.1:1010777..1013330- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4159 ID=rna4159|Name=rna4159|organism=Nannochloropsis gaditana|type=mRNA|length=2554bp|location=Sequence derived from alignment at CM002462.1:1010777..1013330- (Nannochloropsis gaditana)
GAACCCGGGCGCCGTCAGGTCCAAGCATGCACTCACCAACTACTATAACG
AGTATAGAATGATATTCTGGGCATTTCACGCCATGAGTGTGGCTTTAGGA
ATCGGCAACGGAGAGACCGTCCTACCATTTTCCTTCCCCTGTGCCCTTGC
CACCGACGAGGGTTGAGCTCGAAGGCAAAAACATACACTCGTGATTTCCC
CATACACACGAGAAGGAGAAAGCATCTACCACCATAGGTGCAGGCAGGAC
ATTTTGGCCGCGGTGTGTCTTCACGAGCGGTGTCGTGAAGACTTTCTTGT
GTTCTTCCGTTCTCCTGGATTTTGACATGATTTTTTATGACTTTCAAAAC
AGCAGGACGGCAGCAGCAGGCAGGTCTTGCCCGACAATTGAAATCTTATC
TCAGGCCTCGCCATGTATTTTCCTCTGATCTCCCTTCACAGGACACATCT
TTAGTCCATGCGATGGGAAGAATGGCAAAATTTTGCCGTTTTGTTGCCCT
TGTCCTCGTCCTGCTCTTCAATAGCGTAGTGACAGGTGAATATGTCCGAG
GACCTTTGCGGCCAGAGTCGAGGGACTTGTCAAGCACGGGTCTGGATGGG
CTCACATACAGTGCAGACGAGAAGCATGGTATGTTAAAAGACTCATTCGT
GGGGCAGAGAGTGGGTAAGCTTCCAAGGAGGTGCTTTTCTTTGTGGGGGA
ATCGATGACTTCAAGGTGCTTTCTAGGCGAGGTGGAAACGTGCTTTTCTG
TCCGATGGCATAATCATCAGCTCAGGACCTTGTCGTGCTGTTTGGACGTC
AACAAGCAATATGACGACCCCACGCTGGCGAGCCCGCGATGCCTGCGGGC
TGTGCACACATTGAAGATGCAGTTACCAAATGGCGCGAGCCGATCACAGA
TACTTGACAGGCTGGCACCGCTCTCTCAGCCACGTCTTTTCTCCTGAGTG
AACTCCTGTGTGCTCGTGCGCCTTCATCCTTCCTTTACGTCGCTCCATCC
TCCCTTTCCCACGTGTCCTCCCTTCTCTCCTTCCTTCTCCCTCCTCCCCT
CCCCTTCCTGTCCGTGCTCTCTTCCCCCCTTTCCCCCGATCCCGCCCTAC
AGCATCTGCGCACTTTCCCCCACGCCTGCTCCGCCCCGCCCGAAGCCAAG
CCCGTGTCCAACACCAAGTGAAGCGGGACATGATTTCCTCCGTCTTCCTC
GGAGCCGCGCTTGCCTTTGTCTTCCTGGCGGCCTTGGTGGTGATCCGCTG
CAACTGTGCACGCGTGTTTCCCTGCATCTGTGGGGAGGAGGCGCTGGCGG
CCAGGAACGAGCTTTTGAAGGACGTGAGTCGGTCGTTCATGAAGATGAAG
GAGGAGGAGGAGGAGGAGGTGGACATCGTGGGCGAGGAAGGGGGACCAGA
CGGGCCCCCGACCAGGGTCCACGGCTCGGAGGAGGCGTTGGACGGGCAGG
TGCTCGACAAAGGGAGAAGGGGAGGAGAGGAGGAAAAGAAAGAGGAAGGA
GCGGAGGCGATGGAGGAGAAGAAGGCTCCGGCTGCCCCGTCGACCACATC
CTTGTCGGAATGGGTAGCCTCCCTGGGGTTGTTGGCAGGCCAGGCGCGTG
TGCGGCCGTGGGCGGCGGCAAAGGTGGACGACGGGGCGCAGACGACAGGG
AAAAAGGGGGAAGACCGGTCCCGTGGGGAGTGGGAGGATCGGACGCAGGG
GGGGAGGGAGGAGTCGAAGCAGTACAGCGGGTTCGAGTGAGGTCTCCTAG
GAGGGCGAAGAAAGGGAGGGGGGGGCGGGCGGGGGGGGCGAGGATTGCGT
GGAGGACGCCGGGTGCATAGGCGATTGAAAGTACTAGAGAGGCGCAAAGC
ACGAGACGGTTTGGGAGGGTGGCATACCCAACAGAAGAATGCGGAGGGGG
AAGTGCATCCGACGATGAACTTGAAAATAATATGTTGAATTTAGTTTTAG
ATTGTAAGTACAATGTATCGTTGTGCCATCCCCGAGATCTACCCGCCAGC
CGGCCACAAGGCGCGTGCCAAGAAAGTATCTGTAGGCGGGAGAGAGGCAG
CGTTGGAGGGAAGAGTAGAGGGGGGGAAGGCAGTAATCCGGGTCGGAGCA
GGTAGGATACTCTGTCGATCGAGGGGGGAGGTGAGTGAGTGTCTGGGACG
CTGAATCGGAGCAATGCACGAGAAGGCGGTGGGGAATGTCGGGAGGCGGG
GCAAGTGGAGGAAAGTGGCTGGCGAACGACTGGATGGCGGCCTTGGAGGC
TGAGATCCAACTGTCACTCAAGCGCGCCTAACAGGCGATCACGGAAGGAT
GTGCTCAGGGCTTGAGGCGAAAAAAAGGAAGAGAGAGGGGACAGGGAGGA
CAAGAGAAAGGATGGAGGGAGGGAACAAGCTACTAAAGTGACATGAACCA
GAGCTTTGTAAAAGGGATTCATGCGCGGCCAGACATGGCTCTGTGGGCGA
CACTTTCAGAGGATTATTCTTGGAGGAAAGGGAGGCGATCGATTGGTTTG
TGATTTTCGCTGGCGGACATGTCGAAAAAGAACCAAAGACATGCAGTCTT
TCAT back to topCoding sequence (CDS) from alignment at CM002462.1:1010777..1013330- >rna4159 ID=rna4159|Name=rna4159|organism=Nannochloropsis gaditana|type=CDS|length=1860bp|location=Sequence derived from alignment at CM002462.1:1010777..1013330- (Nannochloropsis gaditana)
CATCTGCGCACTTTCCCCCACGCCTGCTCCGCCCCGCCCGAAGCCAAGCC
CGTGTCCAACACCAAGTGAAGCGGGACATGATTTCCTCCGTCTTCCTCGG
AGCCGCGCTTGCCTTTGTCTTCCTGGCGGCCTTGGTGGTGATCCGCTGCA
ACTGTGCACGCGTGTTTCCCTGCATCTGTGGGGAGGAGGCGCTGGCGGCC
AGGAACGAGCTTTTGAAGGACGTGAGTCGGTCGTTCATGAAGATGAAGGA
GGAGGAGGAGGAGGAGGTGGACATCGTGGGCGAGGAAGGGGGACCAGACG
GGCCCCCGACCAGGGTCCACGGCTCGGAGGAGGCGTTGGACGGGCAGGTG
CTCGACAAAGGGAGAAGGGGAGGAGAGGAGGAAAAGAAAGAGGAAGGAGC
GGAGGCGATGGAGGAGAAGAAGGCTCCGGCTGCCCCGTCGACCACATCCT
TGTCGGAATGGGTAGCCTCCCTGGGGTTGTTGGCAGGCCAGGCGCGTGTG
CGGCCGTGGGCGGCGGCAAAGGTGGACGACGGGGCGCAGACGACAGGGAA
AAAGGGGGAAGACCGGTCCCGTGGGGAGTGGGAGGATCGGACGCAGGGGG
GGAGGGAGGAGTCGAAGCAGTACAGCGGGTTCGAGTGAATGACTTTCAAA
ACAGCAGGACGGCAGCAGCAGGCAGGTCTTGCCCGACAATTGAAATCTTA
TCTCAGGCCTCGCCATGTATTTTCCTCTGATCTCCCTTCACAGGACACAT
CTTTAGTCCATGCGATGGGAAGAATGGCAAAATTTTGCCGTTTTGTTGCC
CTTGTCCTCGTCCTGCTCTTCAATAGCGTAGTGACAGGTGAATATGTCCG
AGGACCTTTGCGGCCAGAGTCGAGGGACTTGTCAAGCACGGGTCTGGATG
GGCTCACATACAGTGCAGACGAGAAGCATGCATCTGCGCACTTTCCCCCA
CGCCTGCTCCGCCCCGCCCGAAGCCAAGCCCGTGTCCAACACCAAGTGAA
GCGGGACATGATTTCCTCCGTCTTCCTCGGAGCCGCGCTTGCCTTTGTCT
TCCTGGCGGCCTTGGTGGTGATCCGCTGCAACTGTGCACGCGTGTTTCCC
TGCATCTGTGGGGAGGAGGCGCTGGCGGCCAGGAACGAGCTTTTGAAGGA
CGTGAGTCGGTCGTTCATGAAGATGAAGGAGGAGGAGGAGGAGGAGGTGG
ACATCGTGGGCGAGGAAGGGGGACCAGACGGGCCCCCGACCAGGGTCCAC
GGCTCGGAGGAGGCGTTGGACGGGCAGGTGCTCGACAAAGGGAGAAGGGG
AGGAGAGGAGGAAAAGAAAGAGGAAGGAGCGGAGGCGATGGAGGAGAAGA
AGGCTCCGGCTGCCCCGTCGACCACATCCTTGTCGGAATGGGTAGCCTCC
CTGGGGTTGTTGGCAGGCCAGGCGCGTGTGCGGCCGTGGGCGGCGGCAAA
GGTGGACGACGGGGCGCAGACGACAGGGAAAAAGGGGGAAGACCGGTCCC
GTGGGGAGTGGGAGGATCGGACGCAGGGGGGGAGGGAGGAGTCGAAGCAG
TACAGCGGGTTCGAGTGAATGACTTTCAAAACAGCAGGACGGCAGCAGCA
GGCAGGTCTTGCCCGACAATTGAAATCTTATCTCAGGCCTCGCCATGTAT
TTTCCTCTGATCTCCCTTCACAGGACACATCTTTAGTCCATGCGATGGGA
AGAATGGCAAAATTTTGCCGTTTTGTTGCCCTTGTCCTCGTCCTGCTCTT
CAATAGCGTAGTGACAGGTGAATATGTCCGAGGACCTTTGCGGCCAGAGT
CGAGGGACTTGTCAAGCACGGGTCTGGATGGGCTCACATACAGTGCAGAC
GAGAAGCATG back to top
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