|
|
Properties
| Property Name | Value |
|---|
| Product | methyltransferase family |
| Orig transcript id | gnl|cribi|Naga_100084g14.1569.mrna |
| Orig protein id | gnl|cribi|Naga_100084g14.1569 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:922936..925229 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4125 ID=rna4125|Name=rna4125|organism=Nannochloropsis gaditana|type=mRNA|length=4383bp
AGGTATTTTCCATGACATGGAATGTCGAAAACCTTTGACGAGTGCAAAAT
TTGCAGCAGCAGCAGCAGCAGCGGCAGCGAAAGCAGTCAAGACGAAGGGT
GGACGGAGGGGGAAGAAGAGGCGTTGCCTCCCAAGAACTCAACAATAATT
TCCGAAGATACATCATACTCTACTGGAACTCATTGTTGCATTAAGTTCGC
ATGTCGTGTGCTACGTTTGGAACTACCGGTCGACGGGCCCAAATCGTTTT
TAGGTATCGAGAGGGAAAAACTAGTTGTGACCTGTCAACTTCGGGGGCCT
CCTGATCGTGACGTGGACACCAGTAGCTTTAATGTCGCTAGTGCAACCTT
ACCTACAAGCTACCATTTCTCAAAACGGCATATATCTTGGAATCAAGCTG
TGAACCTCATGACCATAGAATGGTCAGAGGAGCTGGTTTCATTAAGGCAA
GCTTTCGCTGGCGCTGCTTTACACTTCATGCTATGGTCATCGAATGCCCT
CTTAGGACAAGCAGATTTCCCCTTAAATATCATTGACAGTGAGAACCCTT
TAGGCCCTCAAATAGCCCAACTTCGCTTCACTCACGCTGCACGAAAAGGG
CAGGTACAAAACCACTCGTATGAAAGCTGGAAACTTCAGAAGGCGAGCTC
AACGGCATCATTTCGGTCTCCGCGACCCAGCGATTTGCCGGTACCTGAAG
CAATGCCTTCGACAAAAATGCGGCAATGCATAGTTTCAGAACCGTCTTGT
TTAGGTGACAGCGGAGAGAAACATTCGCCGACTCCTCCTGAGCCGAAACT
CGCCCATGACAGTCTCGAGTCTGCGTCCATGTCAGCATCCGAGGTCTCCA
CTTCCTCCGACTCTTGGCCCAAAGAAGCTGCATTGGTATTTGAGATTCAT
TTCCCGCCTCGCAGACTTCCATCACTGCCAAGAACAGCCCCTCTCTCCTC
TCCCGGTATCTGGCAACGCATGCAAGGCCTAATAGCCCGACCTTCCGACG
CGCTGACCTCTGAGGAAGCAGACTTGCTCTGGCGCCACCGGCACACAGTC
ATACCACAGGATTCTCGAGCACTGGTGAAATTGTTGCGGGCATGGATGCT
TTCGACGGCGTTCCAATACGATATGTGCACGCAGCAGCGTCGGCGTGTGC
AAGATCCAGAAGCGCACGTACTCAGGGCGAGTGGGGATGACTTTGAGGAA
TCTGCTTCCGAATTTTCAAGTCCCGTTCTAGAACTATTGGAAATATGGCG
TACTGGACCTAATGACCTGTCCTTCATGGACGCCATGAAATTGTTGGGAG
CGTATTTCGTCCACCCGGCGATTCGATCTCTTGCCTTGCAGAGGTTAGAG
GAGGCTGCGGACGAGGAACTTTCTTTCTTCTCGCTCCAGTTGGTACAGCT
ACTCCGCTATGAGGCGACGTTTTCGATCGTTCCCTCTCCTGATCCTGTCA
TTGGTTCGACGCCGACAAGCATAGATGTCACGACCTCCCTCGGGGGGGGG
GATATACTCATGACGCCAAGATAGATACAAGCCCTACTACTGTCTTCCCG
CCTACGGCCAGGGCTAATCGGCTGGGGCGTCCGAGATCCCTTGGGAAACT
TCTTATAGAACGGGCGTGTCGTAAACTGGAATTAGCGAACGCGCTGTTTT
GGCACCTGGAAGCACAGATGAAGCACGACCGTCAAAATGGCCACAAGTTC
GAGGCGGTCCGTTTTGCTTTGTTGTACACCTTGCGCGAATCTAATGAGGA
GGTCTACAAAGCACTTTGCGGACAAGACAAATGGTTTAAAAGTATCATCA
AAACCCAATACGACGTGCGGGAAGGTCCAGGACTGCGCGAGCGAAAGCAA
GCAAGGCTTCGTAGACTACTAGCAGAGAAGAAATTGTGCGAGGCGCCTTT
TCCAGTGCCTTTACCCGTCGACACTTCCACCTTCGTCACGCGATTAGATG
CAACGTCAGCATGTATTTACGGCAGTAAGACTTATCCAGCTTTTATAACT
TTTCTTTCATCGCCTTCTGGCCACGACTTGAATGCCGACATTCCCCTTGA
AATGGCAGAAAGGGACATGTGCGAGAAAGGTTGGTTTGCCCATTCTTCGA
CGGCAACTGAGAAGGACGAACTGAAAGCTTCCTATAGCCTCTCAGTCTCA
GGGCATACTCCTTCCATGTGGCTTTCTCCAAGACAACCGCCGCGTCAGCA
ACTTCACGACCTGGAAAGCTCTTCAATCAAAGGGAAAGTCTTGATTTTCA
AATGCCGGGAGGATCTGCGACAGGATCAACTCGTGCTTCAGCTTTTCAAT
CTTATGGATACCATTCTGAAACATGAACTGGGCCTGGATCTTTGTCTGAC
GCACTACAGCGTCATGGCCATGGGGCCAGGAGAGGGAGTGGTCCAGTACG
TCCCCCACGCCTATACTATAGCAGACATCTTAGCTTCGGCTGACCTTACA
AGCTCAGTTTCGGCAAACAAAAGCAAGATTATGGCCTTCTTCAGAAAGCA
TAGCACTCGATTTAGACGAGATAACGGAGAGGAGAAGATACAAGAAGGAG
AGGAAACGAATGTTAAGGGGGGAAGGGAGGGTCGGGAAGAGGGTGATGGA
ATGGAGAATAGTGCAATGGAGGTCGATCCGAAGGTCATGGATACGTACGT
CAAGAGCTGTGCGGGGTATTGTGTGATGACATATTTGTTGGGGATCGGGG
ACCGCCATCTGCATAATATCATGCTCTGTCCTGACGGCCACCTTTTTCAT
ATTGATTTCGGCTTCATTCTGGGGAAAGATCCCAAGCCTACCCCGTTGCT
TGGGCCATTCCGACTCTCATTATCTATGGTAGAAGGGATGGGGGGGAAAG
AGCATGAGAACTTTAAGCGCTTTAAGCAGCTGTGCACGGTGACTTTCCAA
TGTTTGCGCCGACATGCTTCTCTCATAATATGGGTTGTTGGTTTGATGGT
TGATGCGGGCCTGAAAGATCTAGGAGGAGCAGCACACGTCGCACGGAGCT
CGGGCATTCGTGAAGGTCAGAAGAATTGCTCAAACACTTCTTCGAACGAA
GAATTTGGTGGTCGGTCTTGTGCTGGTAGCAGAAGCGCCTTCAAGCGACT
TGGAAGCCGTCTTCTTGAGAGCAGCAGAGGAAAATCTACGCAAACTGTGG
ACGACTCCAGAAGTGGCGCCATGTCCGGGGGAGGGAATGCAGACATCGAC
ATGATGGCTGTCGCCCCTCCGTCTTTCCAAGAGAGCCTGCACGTTGTCCC
ACCACACCACATCGAGGCTTCTCAGAGTCTGCGTAAGATGGAGTCTCGCT
TTCGACTGGATCTGACAGACGATGAGGCCGAGAAGCACTTTGATGTGTTA
GTCCACAAAGCAATAGGTGCGTTGGCTCCACAAGTGATAGAGGCCCTCCA
TAATCTTGCACTCAAGACCAAATAAGCATTGAGTGGCCATGATTAGGTGT
GCTTTCTTTTTTCCACGAATACGAAAGACTAGTGTAAGGAGCACAAAAGA
TGGTAATTGCAATCATTCAAGGTTAAATTCGTAAAGCCGCCCTGAAGAGT
ACCACGGCGTGTAAAAATTAGTCATATTCTGGCCATACGAACGACAAAGT
TAAAAGATATTTTAGTGCAAGCGGTCTTAAATGGAGGACGACAACCGTGG
TTCTGGCTGCTTGCGTAGGAAGTAAAGCGCTACCGCGAAGAGAATCACAC
TGTAGAACTGTCCTTGCAAGAAAGGCATTTTTATGTGTCCTTCTCTTGGC
AAGCTAACCTCGACTTCAACAGGGGAGCTCTTTGTTCTTTGGTTGATCAA
GTCCAGCAAAGGGGTCTGCTTGGACAGGCACGCAGATCTGGCTTTTTTTG
GGAGTCCTTTTGTTGGTCACGCATCGAAACATATTTCTTCACACACTTGT
CGTTATGCTTGCATTGTCTTGTCATTTGATATGGCTTGATATCGTTCATT
TAGTACTTTTACCATGTAAATGATTATTAAATTGACAGGTGACAGAGCAA
AGATTACAGTCATGTCAGAGTAACCGTGACAAAGGACACTTCATTAAAGA
TGTATCCACACTCATCCAGCGCTTAGCCTTGAATGCAGAAATTAAATAGT
GAATTTGGGATTAAATGACATTCTGTGAAACTCTTCAATCAATACAAGAC
GCGATACTGAAAATATATAAGACACGTCCTATTTATAACCTTACTCAAAG
CCAAGCTTGGGGTCGAAGTGGTATAAAAGGGACTCCCATATGACATTTAA
AATATACTACTGGACGGTATGATACAAAAAGACAAGCAATCATGTCTTCC
GCTGATATATATAAAGCGCGAATCTCCCGCTCATGTTTCTTTGGCTACGT
ATAAGTGCCATTCCAAGGTCCAGGCCGCTCTGC back to topprotein sequence of rna4125 >rna4125-protein ID=rna4125-protein|Name=rna4125|organism=Nannochloropsis gaditana|type=polypeptide|length=499bp
MAHHAPKNTTGHLRSAFMRRGIGINKITGRFLSALVIMYAFLYFDILGGF
AVSDRVNIQEASKAMQALPMSKASDSVAPDSRNFLDLEEANQELPPSLPQ
TEQSNQQIVSATTRDDASSVSAGPVTSQALLHEKDAQTSLNASSGMPVNT
SGSEELRRNYRASFIEELNSSDDLVMKTAGAVLAHKQKHGDCKIDVHKEA
DPWNKLDGVRRDIAVCMVLKNEARILDEYIAFHWLQGVSKFVIYDDASQD
NPWSVLEKYVALGIVEYHNMTGHPNPSSSKLQITSLNTCSKSLRQRAEEE
GLRWIAFIDADEFALSSVPNESLSETLNKNYRGEACLAIHRTWYGSSFQH
KKPSGLVIETYLMASSDYGGGIWNGKLIANINPEGKAINATTLSTVHSFR
KEDNVSCKSQTTIRDVRVNHYLRSLEEYSTKAYHNHNKPQLEETPFERFF
RRDFNLVSSPIAADYACRVHALLQQIEDMKTTGKIPAAERPGPWNGTYT back to topmRNA from alignment at CM002462.1:922936..925229- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4125 ID=rna4125|Name=rna4125|organism=Nannochloropsis gaditana|type=mRNA|length=2294bp|location=Sequence derived from alignment at CM002462.1:922936..925229- (Nannochloropsis gaditana)
AATACAGATAAGGCAGGAATCAGCATGAACTATCCTGGCGTATAGCTGAA
ATCACAGATCATGGCTCACCATGCTCCGAAGAACACAACTGGACATCTTC
GATCAGCATTCATGAGGAGAGGCATCGGAATTAACAAAATTACAGGACGT
TTCCTGTCGGCATTGGTGATAATGTATGCTTTCCTATATTTTGATATTCT
AGGAGGCTTCGCCGTATCAGATCGAGTTAACATCCAGGAGGCTTCAAAAG
CAATGCAAGCTCTTCCTATGTCGAAAGCCTCGGACTCGGTGGCGCCAGAC
TCCAGAAACTTTCTCGACCTTGAGGAAGCAAATCAAGAGCTCCCGCCTTC
GTTACCACAAACAGAGCAAAGCAATCAGCAGATAGTCTCTGCCACGACAC
GAGACGATGCTTCTTCTGTCTCTGCTGGCCCTGTAACGTCACAGGCACTT
TTGCATGAGAAAGACGCACAGACATCTCTCAATGCCTCCTCAGGCATGCC
GGTCAATACCTCCGGGTCTGAAGAGTTGCGTCGAAACTACCGTGCGTCCT
TCATCGAGGAACTCAATTCATCGGACGATCTAGTCATGAAGACTGCTGGT
GCTGTACTGGCTCACAAACAAAAGCATGGCGACTGCAAGATTGACGTCCA
CAAAGAAGCTGATCCGTGGAATAAGCTTGACGGAGTACGCCGAGACATTG
CAGTGTGCATGGTATTGAAGAACGAAGCGAGAATCCTGGACGAATACATT
GCATTCCACTGGTTGCAAGGCGTGAGCAAATTCGTCATTTACGACGATGC
CTCCCAGGACAATCCTTGGTCGGTGTTGGAGAAGTACGTGGCGTTGGGCA
TCGTCGAATACCACAACATGACGGGCCACCCCAATCCTTCGAGCTCTAAG
TTGCAGATCACGAGCTTGAACACTTGTTCTAAAAGCCTACGGCAGCGTGC
TGAGGAGGAAGGTCTGCGATGGATCGCCTTCATCGACGCTGACGAGTTCG
CTCTATCCTCAGTCCCAAACGAGTCATTATCCGAGACCCTCAACAAGAAC
TACAGGGGCGAAGCATGCTTGGCTATCCATAGGACCTGGTACGGATCGTC
CTTCCAGCATAAGAAGCCGTCGGGTCTGGTTATTGAGACGTATCTGATGG
CATCCAGCGACTACGGTGGCGGAATATGGAATGGCAAGCTGATTGCGAAT
ATAAATCCGGAGGGCAAAGCCATCAACGCGACCACACTATCGACCGTGCA
CTCCTTCAGAAAGGAGGACAATGTGTCATGCAAGTCCCAGACGACTATAA
GGGACGTCCGTGTGAACCACTACTTGCGGAGCCTGGAAGAATACAGCACG
AAGGCGTATCACAACCATAATAAGCCACAGCTGGAGGAGACACCGTTTGA
AAGATTTTTCCGAAGGGACTTCAATCTGGTCTCAAGCCCCATTGCTGCCG
ACTACGCATGCCGTGTCCACGCTCTTCTACAGCAAATCGAAGATATGAAG
ACTACTGGCAAGATACCCGCCGCAGAGCGGCCTGGACCTTGGAATGGCAC
TTATACGTAGCCAAAGAAACATGAGCGGGAGATTCGCGCTTTATATATAT
CAGCGGAAGACATGATTGCTTGTCTTTTTGTATCATACCGTCCAGTAGTA
TATTTTAAATGTCATATGGGAGTCCCTTTTATACCACTTCGACCCCAAGC
TTGGCTTTGAGTAAGGTTATAAATAGGACGTGTCTTATATATTTTCAGTA
TCGCGTCTTGTATTGATTGAAGAGTTTCACAGAATGTCATTTAATCCCAA
ATTCACTATTTAATTTCTGCATTCAAGGCTAAGCGCTGGATGAGTGTGGA
TACATCTTTAATGAAGTGTCCTTTGTCACGGTTACTCTGACATGACTGTA
ATCTTTGCTCTGTCACCTGTCAATTTAATAATCATTTACATGGTAAAAGT
ACTAAATGAACGATATCAAGCCATATCAAATGACAAGACAATGCAAGCAT
AACGACAAGTGTGTGAAGAAATATGTTTCGATGCGTGACCAACAAAAGGA
CTCCCAAAAAAAGCCAGATCTGCGTGCCTGTCCAAGCAGACCCCTTTGCT
GGACTTGATCAACCAAAGAACAAAGAGCTCCCCTGTTGAAGTCGAGGTTA
GCTTGCCAAGAGAAGGACACATAAAAATGCCTTTCTTGCAAGGACAGTTC
TACAGTGTGATTCTCTTCGCGGTAGCGCTTTACTTCCTACGCAAGCAGCC
AGAACCACGGTTGTCGTCCTCCATTTAAGACCGCTTGCACTAAA back to topCoding sequence (CDS) from alignment at CM002462.1:922936..925229- >rna4125 ID=rna4125|Name=rna4125|organism=Nannochloropsis gaditana|type=CDS|length=1500bp|location=Sequence derived from alignment at CM002462.1:922936..925229- (Nannochloropsis gaditana)
ATGGCTCACCATGCTCCGAAGAACACAACTGGACATCTTCGATCAGCATT
CATGAGGAGAGGCATCGGAATTAACAAAATTACAGGACGTTTCCTGTCGG
CATTGGTGATAATGTATGCTTTCCTATATTTTGATATTCTAGGAGGCTTC
GCCGTATCAGATCGAGTTAACATCCAGGAGGCTTCAAAAGCAATGCAAGC
TCTTCCTATGTCGAAAGCCTCGGACTCGGTGGCGCCAGACTCCAGAAACT
TTCTCGACCTTGAGGAAGCAAATCAAGAGCTCCCGCCTTCGTTACCACAA
ACAGAGCAAAGCAATCAGCAGATAGTCTCTGCCACGACACGAGACGATGC
TTCTTCTGTCTCTGCTGGCCCTGTAACGTCACAGGCACTTTTGCATGAGA
AAGACGCACAGACATCTCTCAATGCCTCCTCAGGCATGCCGGTCAATACC
TCCGGGTCTGAAGAGTTGCGTCGAAACTACCGTGCGTCCTTCATCGAGGA
ACTCAATTCATCGGACGATCTAGTCATGAAGACTGCTGGTGCTGTACTGG
CTCACAAACAAAAGCATGGCGACTGCAAGATTGACGTCCACAAAGAAGCT
GATCCGTGGAATAAGCTTGACGGAGTACGCCGAGACATTGCAGTGTGCAT
GGTATTGAAGAACGAAGCGAGAATCCTGGACGAATACATTGCATTCCACT
GGTTGCAAGGCGTGAGCAAATTCGTCATTTACGACGATGCCTCCCAGGAC
AATCCTTGGTCGGTGTTGGAGAAGTACGTGGCGTTGGGCATCGTCGAATA
CCACAACATGACGGGCCACCCCAATCCTTCGAGCTCTAAGTTGCAGATCA
CGAGCTTGAACACTTGTTCTAAAAGCCTACGGCAGCGTGCTGAGGAGGAA
GGTCTGCGATGGATCGCCTTCATCGACGCTGACGAGTTCGCTCTATCCTC
AGTCCCAAACGAGTCATTATCCGAGACCCTCAACAAGAACTACAGGGGCG
AAGCATGCTTGGCTATCCATAGGACCTGGTACGGATCGTCCTTCCAGCAT
AAGAAGCCGTCGGGTCTGGTTATTGAGACGTATCTGATGGCATCCAGCGA
CTACGGTGGCGGAATATGGAATGGCAAGCTGATTGCGAATATAAATCCGG
AGGGCAAAGCCATCAACGCGACCACACTATCGACCGTGCACTCCTTCAGA
AAGGAGGACAATGTGTCATGCAAGTCCCAGACGACTATAAGGGACGTCCG
TGTGAACCACTACTTGCGGAGCCTGGAAGAATACAGCACGAAGGCGTATC
ACAACCATAATAAGCCACAGCTGGAGGAGACACCGTTTGAAAGATTTTTC
CGAAGGGACTTCAATCTGGTCTCAAGCCCCATTGCTGCCGACTACGCATG
CCGTGTCCACGCTCTTCTACAGCAAATCGAAGATATGAAGACTACTGGCA
AGATACCCGCCGCAGAGCGGCCTGGACCTTGGAATGGCACTTATACGTAG back to top
|