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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100084g17.1562.mrna |
| Orig protein id | gnl|cribi|Naga_100084g17.1562 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:917642..918051 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4122 ID=rna4122|Name=rna4122|organism=Nannochloropsis gaditana|type=mRNA|length=5797bp
CTCCTGGCCCTTATGTCGACGAGACACTTCTTTTCACTTACATGTGGCAC
CCACGACGCCTTTGCGGACATTTCACAAAGGAGACAACCTGAGATGACAA
CTTGTCCTTCACCTGTGTGGTCATGTTCGTTCACAACCAGCATAAAGCGC
GCAGCCATTCGCAAAGAAGGGTCTGATCTTTCTGTCGGGCGACAAGACAA
CTCTAATACTGACTTACGAACGTCTTTTCTTTCGCGTCCCAGAGCTTCAA
TTTTCGCCCCACTTCGATGTCCTGTCTTTCATGAAAGCGACAAACACGCT
CAGCTTACCACTTTTCCACCCTACAATTTTGCGAACTATCTTAGAACAAA
AACGGGTCGTCTAAGCAGTCGCCACCCATGCTCAGTGCGAGTCCCGCCGC
ATCCTGGCCGCCTGATGGCGCGCGCCCTCAGCAAGATCCACCTCCTTCCT
GCCATCCAAGCACGCTCACTGGAAGCAGAGACGTGCCAAGTCAGCCATTG
ACTTTCTCGACCATGCGATGCCCTGACACGGAACCCATGGCCGAACAGCT
TTCAGTGACCACCTTGAACAGCAACGATAGTAGGCATCGTGTCGCACTTC
CCGGAGCTTTTGAAGGATGGGGCCTGGTACCTGCGCTGCCCGTGGACAAG
CCTGCTTCGACCTCCAGGCATAATACGTACAATCCTTGTGGGAACGGGCC
CCATGCAGCGCACGAGGGCCGAGTGCCTAGGCTTTCTGAAAGGCCAGGGT
GCGACGAGGAGGAGATCGACACCAAGGGGTTTGTGAAGCGGGATGAAAAC
ACTGCGAGAGGGCAATACGTAAGAGGCAGTATCAACTGCGCAAATCTGCC
GCCCGATTTACAACGCACCTATGGCCACCACTTCCGCGACGGCCCACCTG
AGTCTGCCTTCTTGCCGTGCGCCGCCTCGCTGTGCGCTCCCGCGGATGAG
CTCAGAGGGGGGTCGAATCCAGCCTTTCCTGTAGGGTATCCGGCGCCATC
GTTAGGCTTGCGAGCTCCCAGCCTGCTTGGCTCCGGCCAGCCCCACGGTA
AAGAGCCGAAGGGCAAAAGGGAGGAGTGGGAAGACGTTGGATACCCCCCC
CTGAAGCCCCCGCAGGCAAAGCGTCAGACAGCTCGGGAAGGGCGGTGGAC
GAAGGAGGAGCACACGATCTTTTTGCACGGGTACGAGCGATTTGGGCGGT
CTTGGAAAGATATTGCTGGCCTGTTGCAGACGAGGAACTCGGAGCAAGTG
CGGACGCACGCGCAGAAATTTTTCCAGAAGAAGGAGCACCCCGGGGGAAT
GGAAAAGCATCAACGCAGCTCGCGCGCCAGCTTTGACGGGGGCTCTAGTA
CGGATCTGACGTCCTCTTTCCCACCTGCTGCCACGGGCATCAACTCCCAA
GCGGGCCGAAAAAGCGAGGCGGCGAAGCGCGTCAAGATTGGCCGGGTAGG
GGGACCTGGCGAGTCCGCTCAGGCGGGAGAAGCCGGGCATGACCCGCTCG
GTGCCTACGTCGTCCCCGATTTGGGCCTGCACGGACACAACGAAAGCCAG
TGGCAGTCTCTTGAGTGCTCTGGCAGGCCGTACGTGGTTTCCCATCCGGA
TTCGCACGTACACCAACACCCCTCTCCTGCAGGCTCCTACGCTCAGCCTC
CATACATCGCTCCATCTCCGGGGAAATTCGGCGTGGACTTAGCTCCGCCC
GTGGAAGGACGACGCCAGCAAGTCCACGAGGCGGAGGCAACGGCCTGGGG
GCTCAGGGCGTGTGAGGCGGACGCGCGCCAGCCGAGGGTCACGACCCGGA
TGTCGGAGGTGCCAGACGCGCCCGTGGTCGAGAAGGAGGAGGGCCGAGCA
GGGGAAAGCTCGGCTGCAGGAAAATCCTTCCAAGCGAAAGCGTCCCCTGT
CGTGACCCGACCCTCCCCTGAGCCCAAGGGCGCGTCCTGGACGGCCACGG
GAGAGGCGGAAGACGAGAAGGCGTCTTCCGTGGCATCGGCTTCCTTATCC
TCTCTCTCCATGTCGGACGACCTGAGCCGTGGGAATCTCACGTCCGGCAG
CAGCACGATTGGGGGAAGCGGAATTTCGTCCAGGAGTGGGAAGAAGGGGA
AGGAGAGTGGGAGGAAGCCGGGAGGGACGGCCCCCCCGTCCTTGGCTATG
TCGCTTTTGATCAAGGAGTTGGAGGACCACGAGGACGAGGCTGGGAGCCG
GTCATCGACCCCCTCTTCCACGTCCCTCGATTCCAAAGAATTGCGCCCAG
AGGGAGGAGTGCGGCCGCCTTTGCTTCCGGAGGAGGCGTCCTACAGCGCC
TCTTCCCTCGACGCGGGCGGACTGTCTTCCTTCTCCTCCTCCTCCTCCCT
GGCATCCAACGTCCACCACCACCACCACCACCACCTGCCTGCATGTGCCT
TGCCTGGCCGGCGCTTCGAGAGATCCGCAATGTTCATTTCTTCGGACGAG
GAGGAGGAGGAGGAGGAGGAGGTTGCGGACCGTTTCCTCGCCTTGGCATA
CCCGCCCGCTCCCCCAGCCGTGACATGTTCGGCACGCCTGGGATGTTCGA
CGGGGGCAGCCCACTTGAAGCACCCCCGTCTCTTTCTTAACGGAGGGAGC
CCTGTGTACGGGTGGCAACAGCGTTCCGAGGGCGGCGAAGGTGACCACAG
CGATACGGACAGTGACGGCGCCGAGAGCCTGGGGAGCAGCTCTAGCGGCA
GCAGCAGCAGCAGCAGCAACAGCAGCAGCGGTGAGGAGCAAATGAGCGGA
GCAAGCAGTGACGACGAAGCGATCGACAGCGACGAGGAGTTGATTGTGAC
TGCTCGATGGCCTGGAGGTTCTCTGAAGGACGGTGAGGGGGGGGGGGAAG
CCAGGGTGTACAGCAGCGACGAAGGGGAGAATGAAAGCCGGAGTCGGTGC
AGCGGTATGACGTCGCGATCGTCCTGTGTCTCCTCCTCGGCAGCCACCAG
CGCGGCGGCCCGCAATTGGGGAGAATCTCGCCCGATGAGCATGCTTTCCC
GTCCTTTCAGCGGCCATCGAGACCCCCATGGCGTGAGGAAATCGGACGCT
ACGACCGTGCGGGAGGGTCGATGGTCTCGTTTCGAGCACGAGAAATTCTT
GGAAGCCTTCCAACGCTTTGGGAAAAGCTGGCGGATGATCGCCGCGGTCT
TGCAGACGCGGACGGCCGAACAAGTCCGTACCCATGCTCAGAAATACTTC
CAGAAGAAGAAGCTGCGGCACCATTTGCATGCGACCCCAGCGTCCGCCCC
TCCCCACGCCTTCCCTTCCACCATCCTCTCATCCAGGACGAGTGGGAAAG
GGTACAGCGCGCAAAGACACACGGGTGCAGGACGCTTGGGCAGGGACAGG
GCTCAGGTGCCTTTCAATCAACCGCCCAACTGGCAACCGCAGCCAAGTAC
AGGGATGGCCGAGAACGCGACGGAGGTGAACGCGGAAGGCTGCAGGAGAG
ATGGCATTTTGGACAGCGTGGACGTGGGGGAGAAGGGCCACAAGGGCAGC
CACGGGCCAAGGAAGAGGAACAACAGTGACCACAAGGCGCTGACCATCAA
GGTGGATCGAGCCAACAATCGCATCGTCGATCCGGTCTTCCCTCTTCCGG
CAGATCAGCCGTCGCACGCGCAGGAAGTTGAGGCACACATTGTCTACAAC
AACGGGACGGGCAGCCATGCTCAGGGTTCTGTTCCATCTCCGGCCACCTC
CTCTTCACTCTCTCCCGGGGACCCCCCGCAAGGCGGGACGGAGGCCAAGG
TCAGGGGGGAATACTGTCTCGGCCAGCGCATGAACAGCACCAGCAGCACC
AGCAGCAGCAATAGCACGCGTATCCCTACCTTTCAATTTCCGTCCGCCAA
TTCCTCGGTGGCTTCTATGGGGGACGAGGAGGACGAGGGCGAGAGGGGGG
AAGGGGACCGGGGTGCGGGCCAGGAATCAGGCGCGGGGATAGGAGGAATG
AAGCGGGAGGGACACTACATGTGCAGGACGGAGGGTGAGGGGTCGGGGAG
GAGGACCTCTGTGGGAAAGATGGTGTTCTCTGCGTCGGCTGGGGGCAAGC
CACCCTCCGCCCGTGTCCGGGCTCGGAACAACCAGCTTCATGCGCACGTG
GCGACCGGAGGGGCTCAAGATTCGGCAGGGGACAACAGGTTGGCCGTGCA
AGATGGGAACAACCATGGACCTGGGGGAGGAGGGGCCGGTGTGAGGGAGG
GGCGATGGACGCAGGAGGAGCATGCGGCATTTTTAGAGGGCTTGATGCAG
TACGGAAAGAGCTGGAAGGAGATACAAGGGATGGTTCAGACCAGGACATC
GGATCAAATTCGAACACATGCACAAAAATACTTTATTAAGGTAGGCAAGC
AGCACCAGCACCCGGCTTTGTCGACCGAGCAAGCAGGACGGGTCCAGGGA
TCGTCTATTGCCGTATGACAAGAGGCGAACGGGAGCTACAGGAAGGAAAA
GAGTTCTAATCGCTGTGGTTTTATGTGGTAAATCGTCATTCTTTTTTTAA
TAGAGGGTTTATCAGAGGTTCTTTTCAGCCACCAGAGCCAGCAGGAAGAA
ATTGAGGAGCTCAAAAACCAATAGGGGGGAGGAAAAAAAGAAGAATTCAG
CCAGCCGAAGTAAATATTACAAGCCGCAATAGCAGAAAAGAGGAATTGTT
TGAACAGCCATGGAAGGGAGCCATACCCACGCCACTGGGAGGAGCAACGA
GGAGCGGGGAAATGCCTAAGGGGGTTTCCGGAGAATGTGTGTGGAATGGC
GGTCCCGTGTTCATTTAAATTTAAATTTTGTCGGGAATAAAGGTAGGGTG
CAGTGTGTTTCCCTTTGAAGTCAAACTTGTTTATCTCGCATGTCCGGCAC
AACACCATAAGAAGATTGCGGGAGGAGAGGAAAAATCTGAGCACAGGAGA
CAGAAAGGATTGTAGGGGTGGATGTGGTGGGAGCAGGAAAGCAACATACA
TGACCTGTAAAGCCCAGGGAAAATCGATGGTGGCAGGGCCGATCGAGGGA
CGGGGCGGGGGCTACGAAGAGATGCAATTGATGGAAAGCCTTCTGTCTTG
CGAACATTCATCACGATGGGATGACATGGAACATGACGGTGACGCAACCA
AAAACCTGATGCCTCCTTCCTGTGATCTACGTGTACCTGGAATGGCGCGC
GTGTATATGCAAAACGGAAAGCTTGTGTGGGATGAGAGAGACACGGGGCG
AGCAGGTCGAGAGGGGTACAGGATGTGCGCATGCGTGTTGCTCCTATCAG
AGCGAGCGATCTGACAGGGAGGATTGACGGGAAATTCGGAGTGGGAGTAG
AGCGGGCCCCTTTGGCCCTTGCTCAGAGTAAGTGAAGCAGGGCAAGGAGA
TGACAACAGGCGAGAAAAACGAGAAAAAAAACCTGGGTAATGTGATAGGA
CACGGGTGCTGAATTTATACGATAGTATTGCCAGCCTTATAAATGCGACG
GGGGAATGAAGGGGGATCGATTGTTGGGCTGATATCACGGGAGCTCAGGC
TCGATGCAAGGGAAAGCTTCGGAATGAGGGGATGAGCGCCTGGCGCGAGC
CTTTCGTGGGAGACCTTCCCTGTATGGAAGCTTTGCTCGGCCGTGTACAT
GACGCCTGGGACATTGCGCCACCCACAGCTTTGATTTTCGTGCGATCAGA
AGAATAACATCAAGTAATTTGTGACAGCGCAGGGAGAATATAGCATGGCA
TGGTTATCTTCCTTTGTCGGGCACGAAGAAAAGTCCCGCGGGCAGCAGCC
TGACGGTTGACAAGTCCTCTCTGCATGAAATATCAAGGGGCTTCCTC back to topprotein sequence of rna4122 >rna4122-protein ID=rna4122-protein|Name=rna4122|organism=Nannochloropsis gaditana|type=polypeptide|length=109bp
MRKTDSLNRENTPDIGIQGNGGSARLVQSCASQFFAVLYRFRHHRPPMTV
QIFTKHVFYRYHFGARGYHRQKFYTKKLLDTSAVISFIHIFILVGGAAEL
DCRFIYDRW back to topmRNA from alignment at CM002462.1:917642..918051+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4122 ID=rna4122|Name=rna4122|organism=Nannochloropsis gaditana|type=mRNA|length=410bp|location=Sequence derived from alignment at CM002462.1:917642..918051+ (Nannochloropsis gaditana)
ATGCGAAAGACAGATTCCTTGAACCGTGAAAATACTCCCGGTGTGCCGTA
GCTTCATGCAAGGCTACCAGCGGGCTCTTGACAAGTATGTGTGAATGACA
ATGTGCTCTTGGAGTTGCAGATATTGGAATCCAGGGAAACGGAGGTTCTG
CTAGACTAGTACAAAGCTGCGCGAGCCAATTTTTTGCTGTATTATACAGG
TTTCGTCATCATCGCCCTCCCATGACCGTTCAGATCTTCACAAAACATGT
GTTCTACCGCTACCATTTTGGGGCAAGAGGTTATCATCGGCAGAAATTCT
ATACAAAGAAGCTGCTCGACACATCTGCTGTGATCTCATTCATCCATATT
TTTATACTTGTGGGGGGCGCTGCAGAATTAGATTGCCGATTTATATATGA
TAGGTGGTGA back to topCoding sequence (CDS) from alignment at CM002462.1:917642..918051+ >rna4122 ID=rna4122|Name=rna4122|organism=Nannochloropsis gaditana|type=CDS|length=660bp|location=Sequence derived from alignment at CM002462.1:917642..918051+ (Nannochloropsis gaditana)
ATGCGAAAGACAGATTCCTTGAACCGTGAAAATACTCCCGATATTGGAAT
CCAGGGAAACGGAGGTTCTGCTAGACTAGTACAAAGCTGCGCGAGCCAAT
TTTTTGCTGTATTATACAGGTTTCGTCATCATCGCCCTCCCATGACCGTT
CAGATCTTCACAAAACATGTGTTCTACCGCTACCATTTTGGGGCAAGAGG
TTATCATCGGCAGAAATTCTATACAAAGAAGCTGCTCGACACATCTGCTG
TGATCTCATTCATCCATATTTTTATACTTGTGGGGGGCGCTGCAGAATTA
GATTGCCGATTTATATATGATAGGTGGTGAATGCGAAAGACAGATTCCTT
GAACCGTGAAAATACTCCCGATATTGGAATCCAGGGAAACGGAGGTTCTG
CTAGACTAGTACAAAGCTGCGCGAGCCAATTTTTTGCTGTATTATACAGG
TTTCGTCATCATCGCCCTCCCATGACCGTTCAGATCTTCACAAAACATGT
GTTCTACCGCTACCATTTTGGGGCAAGAGGTTATCATCGGCAGAAATTCT
ATACAAAGAAGCTGCTCGACACATCTGCTGTGATCTCATTCATCCATATT
TTTATACTTGTGGGGGGCGCTGCAGAATTAGATTGCCGATTTATATATGA
TAGGTGGTGA back to top
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