rna4091, rna4091 (mRNA) Nannochloropsis gaditana

Overview
Namerna4091
Unique Namerna4091
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length468
Alignment locationCM002462.1:830344..830790 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g21.8114.mrna
Orig protein idgnl|cribi|Naga_100001g21.8114
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:830344..830790 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100001g21gene3937Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4091rna4091-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26603.1cds4081Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4091 ID=rna4091|Name=rna4091|organism=Nannochloropsis gaditana|type=mRNA|length=468bp
ATGAGAGCGGACCGCTGGTGTCATCCTAGGCTATGGAAATATGGAAATAT
AACACACGTAAAAGATGTCCCTTGCAATGGCATTCCAAAACGTAGCCCCC
TCAATGAAAACATCAAGACGATCCAAAAGATGACATCGCAGCACATGACG
TATGCTGAACACTCTTCCTTCACCAGTACATCATTCGCCATTTATTACTG
CTGTGACTGCTACGGAAATGATAGTTGCCATGATATTGGACATCAGTCAG
GCCTGCTAGCCCATGGTGATGTTTGCCAGTACTCCGTGGCGCAAATTCGG
CATTGTCACAATCCGTATCTAGTTCTCGCGCTTTCGACCACAGATAACCA
TGCCCTCCGTTTGTTGATACAAGGCCACCGTCACGCTTATCACATCTTAG
ACGCGGTAGGGGCGAAAAACATAAGGGCATTTACAGTTTCTAATGTGCAG
GGGAATAGACATAAATAA
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protein sequence of rna4091

>rna4091-protein ID=rna4091-protein|Name=rna4091|organism=Nannochloropsis gaditana|type=polypeptide|length=95bp
MISCEADNTTCSHCCIEFTVHVFATFATEETDGFPQTAHKGRGINSLSHT
GNNCCLTCVVQTEALGSIFPTPTLTYPLFNTCVHASYQKELLLDS
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mRNA from alignment at CM002462.1:830344..830790-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4091 ID=rna4091|Name=rna4091|organism=Nannochloropsis gaditana|type=mRNA|length=447bp|location=Sequence derived from alignment at CM002462.1:830344..830790- (Nannochloropsis gaditana)
ATGATCTCATGTGAAGCGGACAACACGACAGTCTAGAATGTGAAAGCCCA
TGCTTCCCTTCTAGAACAAGAAATACAACCGGAAAAGACCGAGCGTCGCC
GGAAGGAAATCCCCCAAGGTCGGGACACTACAAGACCCCTTTAGCCTGTA
CCCTTTCGTACATGACATATTCCGCGTTAATTTTTTTAGTGCTCTCATTG
TTGTATAGAATTCACTGTCCATGTATTTGCTACATTCGCGACAGAGGAGA
CTGATGGCTTTCCCCAGACAGCCCATAAGGGGCGCGGTATCAACTCACTG
AGCCACACCGGAAATAATTGTTGTCTGACTTGTGTAGTACAGACAGAGGC
TCTTGGTTCGATATTTCCAACCCCTACCCTCACCTATCCTCTTTTTAATA
CATGTGTACATGCATCATACCAAAAAGAACTGTTGCTTGATAGCTGA
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Coding sequence (CDS) from alignment at CM002462.1:830344..830790-

>rna4091 ID=rna4091|Name=rna4091|organism=Nannochloropsis gaditana|type=CDS|length=576bp|location=Sequence derived from alignment at CM002462.1:830344..830790- (Nannochloropsis gaditana)
TGCTCTCATTGTTGTATAGAATTCACTGTCCATGTATTTGCTACATTCGC
GACAGAGGAGACTGATGGCTTTCCCCAGACAGCCCATAAGGGGCGCGGTA
TCAACTCACTGAGCCACACCGGAAATAATTGTTGTCTGACTTGTGTAGTA
CAGACAGAGGCTCTTGGTTCGATATTTCCAACCCCTACCCTCACCTATCC
TCTTTTTAATACATGTGTACATGCATCATACCAAAAAGAACTGTTGCTTG
ATAGCTGAATGATCTCATGTGAAGCGGACAACACGACATGCTCTCATTGT
TGTATAGAATTCACTGTCCATGTATTTGCTACATTCGCGACAGAGGAGAC
TGATGGCTTTCCCCAGACAGCCCATAAGGGGCGCGGTATCAACTCACTGA
GCCACACCGGAAATAATTGTTGTCTGACTTGTGTAGTACAGACAGAGGCT
CTTGGTTCGATATTTCCAACCCCTACCCTCACCTATCCTCTTTTTAATAC
ATGTGTACATGCATCATACCAAAAAGAACTGTTGCTTGATAGCTGAATGA
TCTCATGTGAAGCGGACAACACGACA
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Synonyms
Publications