|
|
Properties
| Property Name | Value |
|---|
| Product | imidazole glycerol phosphate synthase subunit hish |
| Orig transcript id | gnl|cribi|Naga_100001g28.8160.mrna |
| Orig protein id | gnl|cribi|Naga_100001g28.8160 |
| Gene | HISF |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:814405..817737 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4084 ID=rna4084|Name=rna4084|organism=Nannochloropsis gaditana|type=mRNA|length=843bp
ATGTTAAAAGCTTTAAACGATGCCGTAACTGCCGGCAGTGTGCATAAGGT
CTCCTGCCTGTTGCGTGCCCATCCCTTGCTTGTCTCCACGCGGATGCATG
AGGGAGGATGGACTCCGCTGCTCCTCGCTAGTTACTATGACCAACCTGAG
GTCGTGGAACTCATCCTCAACCGCGCTGGTGTTGGTGTAGATGACGTCGA
CCAAGATATTTTTCGTCGAACCTCGTTACACTGGCTTGCTGCGCATGGCC
ACCCGTTGCTGATTTTGAAGATGGTAAAACAGCACGGGGCCTCTGTTGAC
ATACGCGATGCCGAGCAAAACACGCCCCTGCACCGCGCATGCAAAGCAAA
TCAAGCCCTGACCGTTGCCATGCTTTTGATGCTGGGTGCTGATCCCTTGG
CCCGCACCGAGGAAGGAGACCTTCCATCAGACGTGACTGAGTCGGGCATG
ACCCGGTCGTGCATGCGCCTCTGGCAAACATCCTGCCTGCGATTGTCGTC
TTTTAAACAAGGACGTACTCAGAAAGCCTGCAACGATTATACGACCAAGG
GTATCCAGGATGCAAGTGAGAAAAAGGTTGGAGAAAATCCTTTCAATTCC
TTCGTTTTGGCTGAGACCAATTGTAGGGAGAAGGAACAGGGATTGTTTCA
GTTTCGGTCTGAATCGCTCGGCACCAGATCCACAGAAAGTGTGCTGTCGT
GGGAAGATGATAATGCAGGGGGATCAGAAGCTCCTTCGCTGGAAGAGGAG
GATGAAGCTTCAACTTTGCTTTCGAGAGCTCAGGTCTTGTCGGATTGGGG
CAAGAGGGAAACACCCTTTTGGAAAAGAGGCTTGAGCACGTGA back to topprotein sequence of rna4084 >rna4084-protein ID=rna4084-protein|Name=rna4084|organism=Nannochloropsis gaditana|type=polypeptide|length=541bp
MRQGLAFGRRQPSSSNTKLDLLTLRNFLWQVLETRGFTQPLRDYILADRP
YFGICLGMQTLFEASEECPGVAGLGIIKGTIKGFDSSAPLSVPHIGWNGL
LMQKHTKLIQAIRPQELVYFVHSYRAIPSPEAAPWALTLTTYGTNFISSV
HQGRVLATQFHPEKSGSTGLRILRTFLENFESMEVDASDGLWRPIAETRV
SKRVIACLDVRSNDEGDLVVTKGDQYDVREAAVAGAGEGREGIRGAVRNL
GKPVALARRYYDEGADEITFLNITSFRQGVLDDLPMLQVLERASEQVFVP
LTVGGGIRGYVEPSKGEGGKEGGRTWSALEVAARYFRAGADKVSIGSDAV
TAAEEMIQRGEKTGTSAIEQISTRYGRQAVVVSIDPRRVYLPGPEACPAG
HTPLELSEPSGPNGETWCWYQATIKGGREGRPIDAVRLAHACQELGAGEI
LLNCVDMDGQCRGFDLVLVRAVRAAVTIPVIASSGAGKPQHFSEVFNKTG
VEAALAAGIFHRREVEIDAVKRHLKEVGIPVRLAMASPGPV back to topmRNA from alignment at CM002462.1:814405..817737- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4084 ID=rna4084|Name=rna4084|organism=Nannochloropsis gaditana|type=mRNA|length=3333bp|location=Sequence derived from alignment at CM002462.1:814405..817737- (Nannochloropsis gaditana)
AAAAGTAGTGGTAAACTTGTGACCTGTGCCTATCCTGGCTTTCGCGGAAA
AAGCGATGTTATGTCCGTATAATAGGCCACCTACTCCAACACGACAGTCC
TGTGGACACAGCAGCAATGAAGCCGTCCTCACACAGGTCTCTTATCCAAT
GTACAGGCAGTTATGGCGTCAGCGCCGGAAGTCTCTGCCCCTACCGCCCC
CTCTTCGACCACGTCTCTCACCATGCCCGGTCCCCCACGGCGGCCCCTGG
TCTCTCTCCTCGACTACGGGGCAGGAAACGTGCGAAGTGTCAGGTACTTC
TTTGACGTCCCTCTCACCTAAATCACGAGCTAACGCCCCCTTCTAGTGGA
AAATGAGGGCGGATACGCAATCGCCATTTAGGCCTGCAATAGAGATTGAT
TACACTGTGGGAGGAGAGCCCGGGGCTTCCAGGGTCTCCTGATGCCCCAA
TGCTGCTTTATGAAAGACCGTATCCGTCAATGCTCTCTCTTGCACCTTGG
CTTTTCTCACTCGCTTTCGATGGCCCTGACAGGAACGCGATCGTAGCGCT
GGGTTACCAGGTTCGCGACATCAAAACGTGAGTTCTCCCTCCATGCATTC
ATCTTTTGGTCCCACTGCGCGCATTGAGCATCTTTTCATGCTTTCCATTC
AGGCCTGAAGAGATCGATTCCGCGGAGGTGATAGTTTTCCCAGGGGTGGG
CAGCTTCGGAAGCGCCATGGAGGTGTGAAAGTGGGAGGGGTCTAAGTAGG
CAAGGACGGAGGGAGGAACTTGATGTCCGCGTATGAGACAGGGTTTGGCA
TTCGGGCGCAGGCAGCCAAGTTCATCAAACACAAAGCTTGACCTCCTCAC
TCTTCGCAACTTTCTCTGGCAGGTGTTGGAGACGCGCGGCTTTACCCAGC
CCCTGCGGGACTACATCCTGGCCGACCGGCCGTACTTCGGGATCTGTCTG
GGCATGCAGACCCTGTTCGAGGCCAGCGAGGAGTGTCCGGGTGTCGCGGT
AGGGTGGGAGCGATGGAGGGGAAGGGAGAGAGCGCGCTTGAGGGGCCGAT
GCGGAGGGAGAGGAGTCCCGGGGCCGGTGACGTGTCGGTGGGGCGACTCG
ATTTTCATCCTCCCCTCCCTCCTTGTTTTTCGTCCTCGCTTTCCTCCGTC
GTCCTTTCCACCCAGGGTCTGGGCATCATCAAAGGCACCATCAAAGGCTT
CGATTCTTCCGCGCCCCTCTCGGTGCCCCACATTGGCTGGAACGGTCTCC
TAATGCAGAAGCACACCAAGCTCATCCAAGCGATCCGACCCCAGGAGCTT
GTCTACTTCGTACACTCCTATCGCGCCATCCCTTCCCCTGAAGCGGCCCC
TTGGGCCTTGACGCTTACTACCTACGGGACTAATTTTATCTCCTCTGTGC
ACCAAGGTCGGGTCCTGGCCACCCAATTCCACCCGGAGAAGAGCGGGTCG
ACCGGCCTCCGGATCCTCCGGACCTTCTTGGAGAAGTGAGTGACAGGGAG
GGGCCACAACGGGGGGGGGGGGGTTTGAAAAAGATGTCAACGGTGGGGGA
GGCAGGACTGCGAGGGTCATGCAACCGGGCGGAAAGAGTGGAGGGACAAG
GAAAGGGGGGGCATGGAGGCGCTGCCTTTCAAGCTCGGCACTCATCTCCC
CCCCGCCTCTTTCCCCCCTTCCCACCATCAGTTTCGAGAGCATGGAGGTA
GACGCGAGCGATGGTCTCTGGCGGCCCATCGCTGAGACCCGTGTGAGCAA
GCGCGTGATTGCCTGCCTGGACGTGCGAAGCAACGACGAGGGGGACCTGG
TGGTGACCAAAGGGGACCAGTACGACGTGAGGGAGGCGGCAGTGGCAGGG
GCGGGGGAGGGGCGGGAGGGGATACGGGGCGCGGTCCGGAATTTGGGGAA
GCCGGTGGCTTTGGCGAGGCGGTACTACGACGAAGGGGCGGACGAGATCA
CCTTCTTGAACATCACCAGTTTTAGACAGGGGGTCCTCGACGACTTGCCG
ATGCTGCAAGTCCTGGAGCGGGCCTCGGAGCAGGTCTTTGTCCCTTTGAC
GGTGGGGGGAGGGATCCGGGGGTACGTGGAGCCGAGCAAAGGGGAGGGAG
GGAAGGAGGGAGGGCGGACGTGGTCGGCCTTGGAGGTGGCGGCCCGTTAT
TTTCGAGCGGGGGCGGACAAGGTGAGCATAGGAAGCGACGCGGTCACGGC
GGCCGAAGAGATGATACAACGCGGGGAAAAAACGGGCACGTCTGCCATCG
AACAGATCTCGACCAGGTACGGGAGGCAAGCGGTGGTGGTGAGCATCGAC
CCCCGTCGTGTCTATCTCCCGGGGCCCGAGGCCTGCCCGGCGGGCCACAC
GCCTTTGGAACTCTCGGAGCCCAGCGGACCGAACGGCGAGACGTGGTGCT
GGTATCAAGCAACCATCAAAGGAGGGAGGGAGGGACGGCCCATCGATGCG
GTACGTCTGGCGCATGCCTGTCAAGAATTGGGAGCGGGGGAGATACTGTT
GAACTGTGTGGATATGGACGGGCAATGCCGCGGGTTCGATTTGGTGCTCG
TCCGGGCAGTGCGGGCGGCGGTGACGATCCCTGTCATAGCCAGCAGCGGC
GCCGGTAAGCCCCAACACTTCTCGGAGGTGTTCAATAAGACCGGTGTGGA
AGCGGCGCTGGCGGCTGGGATTTTCCACAGGCGGGAGGTGGAAATTGATG
CAGTCAAGAGGCATCTGAAGGAAGTGGGCATACCTGTCAGGCTGGCGATG
GCGTCGCCGGGGCCGGTGTAGAGAGACGCAGGCGGCCAAGGGGAACGGGA
GAAAGCGGCGGAGTTGGGTGAGGGGAATTTCATTTTATCAATTCCGTGGA
GGCCGTCAACGGTAGTGTGATACTTGCATGACTGTCGGGAAAGGGAAGTG
AGGCGGAATAGTGGAAAAGATGGCGGTCTTGAGACTGAGGAGCGCGAAAA
AAGTGGGAAAGTCGTGAACGTCACATGGAAATTGTGGCGTCGACGTGGTA
ATTCGGACGAACTCGACATTTGTACGGGGATCATAGCAAGGATTCAAACA
GTGATGGGCTTGTCTGGGGAAGGGGCCGGGGGGGGGCGCTCCGGACTAAA
AGTAGAGCAGGAAGCCAATCCTCAGGTAGGAAAATATGTGAGGGTCGCGA
AAGGACATGGAAAGTCAATAAGCAGTCCCAGATGAAAGTGCCGCTCCAAT
CACACTCTGCACATCGCAAGGCATCTTGATGCTTGTAGAGACAGCAAAAT
AAACAAGGTCAAGCAAAGGAATGACGGTGACTTCTCGAAGTAAACCTGCT
GCCTCCATGTCGTGTTTAAAAGTAACATACAGC back to topCoding sequence (CDS) from alignment at CM002462.1:814405..817737- >rna4084 ID=rna4084|Name=rna4084|organism=Nannochloropsis gaditana|type=CDS|length=4878bp|location=Sequence derived from alignment at CM002462.1:814405..817737- (Nannochloropsis gaditana)
TTTCGAGAGCATGGAGGTAGACGCGAGCGATGGTCTCTGGCGGCCCATCG
CTGAGACCCGTGTGAGCAAGCGCGTGATTGCCTGCCTGGACGTGCGAAGC
AACGACGAGGGGGACCTGGTGGTGACCAAAGGGGACCAGTACGACGTGAG
GGAGGCGGCAGTGGCAGGGGCGGGGGAGGGGCGGGAGGGGATACGGGGCG
CGGTCCGGAATTTGGGGAAGCCGGTGGCTTTGGCGAGGCGGTACTACGAC
GAAGGGGCGGACGAGATCACCTTCTTGAACATCACCAGTTTTAGACAGGG
GGTCCTCGACGACTTGCCGATGCTGCAAGTCCTGGAGCGGGCCTCGGAGC
AGGTCTTTGTCCCTTTGACGGTGGGGGGAGGGATCCGGGGGTACGTGGAG
CCGAGCAAAGGGGAGGGAGGGAAGGAGGGAGGGCGGACGTGGTCGGCCTT
GGAGGTGGCGGCCCGTTATTTTCGAGCGGGGGCGGACAAGGTGAGCATAG
GAAGCGACGCGGTCACGGCGGCCGAAGAGATGATACAACGCGGGGAAAAA
ACGGGCACGTCTGCCATCGAACAGATCTCGACCAGGTACGGGAGGCAAGC
GGTGGTGGTGAGCATCGACCCCCGTCGTGTCTATCTCCCGGGGCCCGAGG
CCTGCCCGGCGGGCCACACGCCTTTGGAACTCTCGGAGCCCAGCGGACCG
AACGGCGAGACGTGGTGCTGGTATCAAGCAACCATCAAAGGAGGGAGGGA
GGGACGGCCCATCGATGCGGTACGTCTGGCGCATGCCTGTCAAGAATTGG
GAGCGGGGGAGATACTGTTGAACTGTGTGGATATGGACGGGCAATGCCGC
GGGTTCGATTTGGTGCTCGTCCGGGCAGTGCGGGCGGCGGTGACGATCCC
TGTCATAGCCAGCAGCGGCGCCGGTAAGCCCCAACACTTCTCGGAGGTGT
TCAATAAGACCGGTGTGGAAGCGGCGCTGGCGGCTGGGATTTTCCACAGG
CGGGAGGTGGAAATTGATGCAGTCAAGAGGCATCTGAAGGAAGTGGGCAT
ACCTGTCAGGCTGGCGATGGCGTCGCCGGGGCCGGTGTAGGGTCTGGGCA
TCATCAAAGGCACCATCAAAGGCTTCGATTCTTCCGCGCCCCTCTCGGTG
CCCCACATTGGCTGGAACGGTCTCCTAATGCAGAAGCACACCAAGCTCAT
CCAAGCGATCCGACCCCAGGAGCTTGTCTACTTCGTACACTCCTATCGCG
CCATCCCTTCCCCTGAAGCGGCCCCTTGGGCCTTGACGCTTACTACCTAC
GGGACTAATTTTATCTCCTCTGTGCACCAAGGTCGGGTCCTGGCCACCCA
ATTCCACCCGGAGAAGAGCGGGTCGACCGGCCTCCGGATCCTCCGGACCT
TCTTGGAGAAATGAGACAGGGTTTGGCATTCGGGCGCAGGCAGCCAAGTT
CATCAAACACAAAGCTTGACCTCCTCACTCTTCGCAACTTTCTCTGGCAG
GTGTTGGAGACGCGCGGCTTTACCCAGCCCCTGCGGGACTACATCCTGGC
CGACCGGCCGTACTTCGGGATCTGTCTGGGCATGCAGACCCTGTTCGAGG
CCAGCGAGGAGTGTCCGGGTGTCGCGTTTCGAGAGCATGGAGGTAGACGC
GAGCGATGGTCTCTGGCGGCCCATCGCTGAGACCCGTGTGAGCAAGCGCG
TGATTGCCTGCCTGGACGTGCGAAGCAACGACGAGGGGGACCTGGTGGTG
ACCAAAGGGGACCAGTACGACGTGAGGGAGGCGGCAGTGGCAGGGGCGGG
GGAGGGGCGGGAGGGGATACGGGGCGCGGTCCGGAATTTGGGGAAGCCGG
TGGCTTTGGCGAGGCGGTACTACGACGAAGGGGCGGACGAGATCACCTTC
TTGAACATCACCAGTTTTAGACAGGGGGTCCTCGACGACTTGCCGATGCT
GCAAGTCCTGGAGCGGGCCTCGGAGCAGGTCTTTGTCCCTTTGACGGTGG
GGGGAGGGATCCGGGGGTACGTGGAGCCGAGCAAAGGGGAGGGAGGGAAG
GAGGGAGGGCGGACGTGGTCGGCCTTGGAGGTGGCGGCCCGTTATTTTCG
AGCGGGGGCGGACAAGGTGAGCATAGGAAGCGACGCGGTCACGGCGGCCG
AAGAGATGATACAACGCGGGGAAAAAACGGGCACGTCTGCCATCGAACAG
ATCTCGACCAGGTACGGGAGGCAAGCGGTGGTGGTGAGCATCGACCCCCG
TCGTGTCTATCTCCCGGGGCCCGAGGCCTGCCCGGCGGGCCACACGCCTT
TGGAACTCTCGGAGCCCAGCGGACCGAACGGCGAGACGTGGTGCTGGTAT
CAAGCAACCATCAAAGGAGGGAGGGAGGGACGGCCCATCGATGCGGTACG
TCTGGCGCATGCCTGTCAAGAATTGGGAGCGGGGGAGATACTGTTGAACT
GTGTGGATATGGACGGGCAATGCCGCGGGTTCGATTTGGTGCTCGTCCGG
GCAGTGCGGGCGGCGGTGACGATCCCTGTCATAGCCAGCAGCGGCGCCGG
TAAGCCCCAACACTTCTCGGAGGTGTTCAATAAGACCGGTGTGGAAGCGG
CGCTGGCGGCTGGGATTTTCCACAGGCGGGAGGTGGAAATTGATGCAGTC
AAGAGGCATCTGAAGGAAGTGGGCATACCTGTCAGGCTGGCGATGGCGTC
GCCGGGGCCGGTGTAGGGTCTGGGCATCATCAAAGGCACCATCAAAGGCT
TCGATTCTTCCGCGCCCCTCTCGGTGCCCCACATTGGCTGGAACGGTCTC
CTAATGCAGAAGCACACCAAGCTCATCCAAGCGATCCGACCCCAGGAGCT
TGTCTACTTCGTACACTCCTATCGCGCCATCCCTTCCCCTGAAGCGGCCC
CTTGGGCCTTGACGCTTACTACCTACGGGACTAATTTTATCTCCTCTGTG
CACCAAGGTCGGGTCCTGGCCACCCAATTCCACCCGGAGAAGAGCGGGTC
GACCGGCCTCCGGATCCTCCGGACCTTCTTGGAGAAATGAGACAGGGTTT
GGCATTCGGGCGCAGGCAGCCAAGTTCATCAAACACAAAGCTTGACCTCC
TCACTCTTCGCAACTTTCTCTGGCAGGTGTTGGAGACGCGCGGCTTTACC
CAGCCCCTGCGGGACTACATCCTGGCCGACCGGCCGTACTTCGGGATCTG
TCTGGGCATGCAGACCCTGTTCGAGGCCAGCGAGGAGTGTCCGGGTGTCG
CGTTTCGAGAGCATGGAGGTAGACGCGAGCGATGGTCTCTGGCGGCCCAT
CGCTGAGACCCGTGTGAGCAAGCGCGTGATTGCCTGCCTGGACGTGCGAA
GCAACGACGAGGGGGACCTGGTGGTGACCAAAGGGGACCAGTACGACGTG
AGGGAGGCGGCAGTGGCAGGGGCGGGGGAGGGGCGGGAGGGGATACGGGG
CGCGGTCCGGAATTTGGGGAAGCCGGTGGCTTTGGCGAGGCGGTACTACG
ACGAAGGGGCGGACGAGATCACCTTCTTGAACATCACCAGTTTTAGACAG
GGGGTCCTCGACGACTTGCCGATGCTGCAAGTCCTGGAGCGGGCCTCGGA
GCAGGTCTTTGTCCCTTTGACGGTGGGGGGAGGGATCCGGGGGTACGTGG
AGCCGAGCAAAGGGGAGGGAGGGAAGGAGGGAGGGCGGACGTGGTCGGCC
TTGGAGGTGGCGGCCCGTTATTTTCGAGCGGGGGCGGACAAGGTGAGCAT
AGGAAGCGACGCGGTCACGGCGGCCGAAGAGATGATACAACGCGGGGAAA
AAACGGGCACGTCTGCCATCGAACAGATCTCGACCAGGTACGGGAGGCAA
GCGGTGGTGGTGAGCATCGACCCCCGTCGTGTCTATCTCCCGGGGCCCGA
GGCCTGCCCGGCGGGCCACACGCCTTTGGAACTCTCGGAGCCCAGCGGAC
CGAACGGCGAGACGTGGTGCTGGTATCAAGCAACCATCAAAGGAGGGAGG
GAGGGACGGCCCATCGATGCGGTACGTCTGGCGCATGCCTGTCAAGAATT
GGGAGCGGGGGAGATACTGTTGAACTGTGTGGATATGGACGGGCAATGCC
GCGGGTTCGATTTGGTGCTCGTCCGGGCAGTGCGGGCGGCGGTGACGATC
CCTGTCATAGCCAGCAGCGGCGCCGGTAAGCCCCAACACTTCTCGGAGGT
GTTCAATAAGACCGGTGTGGAAGCGGCGCTGGCGGCTGGGATTTTCCACA
GGCGGGAGGTGGAAATTGATGCAGTCAAGAGGCATCTGAAGGAAGTGGGC
ATACCTGTCAGGCTGGCGATGGCGTCGCCGGGGCCGGTGTAGGGTCTGGG
CATCATCAAAGGCACCATCAAAGGCTTCGATTCTTCCGCGCCCCTCTCGG
TGCCCCACATTGGCTGGAACGGTCTCCTAATGCAGAAGCACACCAAGCTC
ATCCAAGCGATCCGACCCCAGGAGCTTGTCTACTTCGTACACTCCTATCG
CGCCATCCCTTCCCCTGAAGCGGCCCCTTGGGCCTTGACGCTTACTACCT
ACGGGACTAATTTTATCTCCTCTGTGCACCAAGGTCGGGTCCTGGCCACC
CAATTCCACCCGGAGAAGAGCGGGTCGACCGGCCTCCGGATCCTCCGGAC
CTTCTTGGAGAAATGAGACAGGGTTTGGCATTCGGGCGCAGGCAGCCAAG
TTCATCAAACACAAAGCTTGACCTCCTCACTCTTCGCAACTTTCTCTGGC
AGGTGTTGGAGACGCGCGGCTTTACCCAGCCCCTGCGGGACTACATCCTG
GCCGACCGGCCGTACTTCGGGATCTGTCTGGGCATGCAGACCCTGTTCGA
GGCCAGCGAGGAGTGTCCGGGTGTCGCG back to top
|