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Properties
| Property Name | Value |
|---|
| Product | carbohydrate kinase fggy |
| Orig transcript id | gnl|cribi|Naga_100001g54.8230.mrna |
| Orig protein id | gnl|cribi|Naga_100001g54.8230 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:734570..736950 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4059 ID=rna4059|Name=rna4059|organism=Nannochloropsis gaditana|type=mRNA|length=1847bp
GATGGGCCGTCCCCGCTCAGACGATGGCGAGCTCAAAGCGACTCAGAACC
GCCCGTCATCCGGTCGCAGCCATGTCACTGTATCAGCAGCATCGTTTTCA
TGCCCTGCATTTCAATCTTCCGTCTCAGGTTTAAGAAATGTCGAAAAGGA
AAGTTGGCGGAGGCAGTGGGACGAAAGGTCGGCTTCGTGGTGGCAGTGTG
CGCAGCAAGCCTAGCGGAGGGCCAGTCGCTCAGCAAGAGCGTGCTAATCT
GGATTTTTCATTGGAGTCTAAACGGCAACCGAATGACGACGAATACATAG
AAGAGGAAGGCTCGGAATCGGGGGAAGATGTGCCCCGAAAAAGGGGTCGT
GCCACTCAGCAGGGCACGGATGGGGCAATGGAGGAGGAGGATGACGAGAC
AGCAGCAGAGATGCGTGTCCGTCTGGCTAAGCAATATTTGGCTCAAATGG
AGGCAGCTTTGGGTAGCGAAAATGATGAGGAGGAGTCTCATGATGAAGAT
ACTGATCGCGGAAAAGACTCAATGGGTGCGTTATTGGAAAGAGAACGCCT
GAAAGCCTCCGGCTCCCTCAGGCGGGCACTAGCAGGCCGCCTGAGCAATT
TTAGCGCTGCTACGGTGCCCACACACATATTGAAAGGCCACAAACTCGCG
CCAACATGCGTTACAATAACTGCAGATGAACGCACTGCGTTTACGGGTGG
CAAGGATAACGCGATCTTGCGATATGACTTGGAAAGCGGTAGGCGGACGG
CGACCCTCTCATCGTTCTGGCGGGGGGGACAGGGGTACCAATCTCACGAG
AAGGAGGTGCTGGCTCTGGCAGTGTCCTCAGATGGGCGGTATCTGGCCGC
TGGGGGTCGAGACAAGGAGATCAGAATTTGGGATCTACGAGGGCGGGGAC
ACCGGGAAGGTCTTGTGCTGAAACCTGTGAAGACCTTCGCGGGGCACAGG
GACGCCGTCTCTGCGCTTGCTTTTCGTGCCGATGCACACGCCTTGTATTC
TGGCTCTTTCGACCGATGCTTAAAACATTGGAACTTGGATGGAATGATGT
ACGTGGAGACGCTGTTCGGACATCAAGCCGAGATCAACGGCATCGACGCT
TGGCGCCGGGAGCGGCCCGTGACCTGTGGCCGGGACAGGAGCGTGCGAGT
CTGGAAGCTGGCGGACGAGTCGCACATGCTGCTCCAGTGTCCACAGGGGG
TAGGTGGGGGCGGGGCCAGCAAAGGCCTGGTGATGGGCGGGTCTTTGGAC
TGTCTGTCCATGCTGTCCGAGGAGTGCTTCGTGACGGGGGGGGAGGACGG
AATGCTGGCGATGTGGAACGTGAACAAGAAAAAGCCGGTCGCTGTCGTCC
CTGCCGCCCATGGGGGAAACAGTCGCTGGATTTCCAGCGTGGCCGCCATC
AAAGGAACGGATTTGGTGGCCTCGGGCTCGAATGACGGTTACGTGCGGCT
GTGGCGGGCCTCGACCACTCCTCAAGGACAAGGGTCCTCCTTGGAGTCGA
CCGGCGCGGCCCTGCTCTGTCCGGGGTATGTGAATGGGCTCGCATTCGGG
CATTCAGGTTCGGTGCTGGTGGCTGCCTGTGGGAAAGAGCACAGGTTGGG
CCGGTGGGCGCCCGAGAAAGGGGCGGTGAACGGCCTGTACGTCATGCGCC
TGCCGGATGAGCGGATGGGGGAAGATGCTGTGGATGGGGGGGCGAATCCT
GAAAGCGAGTCCGACGAAGACGAAGAGGAAGGTGGGGACGAGAAAGATGA
CGAGAAAACGGGGGAAGAGGAAGATGAAAGCGACGAGTGATTGCGGGGGA
GAGTGTCTCGCCCAATTTTGTAAAGAATAGGCTTGCGCATTAGATTT back to topprotein sequence of rna4059 >rna4059-protein ID=rna4059-protein|Name=rna4059|organism=Nannochloropsis gaditana|type=polypeptide|length=682bp
MFACRRSARSVFITSAHWPSKMLLASRVSLNSKEHRAFTAGAVISILGLL
ATAFASFSSLKKWKHRRYLKELGITNGSKNCIGLAVDIGSSSVRCSAYVL
RVDRSVTFVSGTLAQIKRDAIEIDGTADAEKVLHDVETSVDECLCRLRAM
DLAHLVSVVGFASFVMNLVGVDRSGRPITPVLTYADRHPSTATYARKLRQ
SMTDRSNDASHLERPFNQPSGGQSSEKETLSGSTAMAMANRYLQLFSEVA
TTLSKDDGDSDVADDDKGKSKSSSPSRIQGGTAVLHNVTGAPIHTAYAAP
QLWRLAVEEAELVNRVSKWQTLVSLCLARWTGATHLPVSFSEASWTGLLD
FRALEWSAALTSMLPVPRLSLPDLADYHQGPHGAELAPAYVSRWPELSQA
RFLLGVGDGACANLGSGCGDSGRLAVTIGTSAAARVVIAEEELPSGGEDG
NHGRSSLVPPGLWCYRIDRRRLLLGGALTDGGSLLKWISETFRVGPNAVS
TESLAGKQQPGGHGLTILPFLSGERAPGWCPNATASILGLTKQTTGADVY
RAGMEAVALRLAAIVRLMRPHLGQNLVVGASGTALERSGLWRQILADALG
LEVVLEEQGEATSKGVAALMAEWRFEEEPLREAATQEQVLFRHTPHQDAH
AAYQEALQRQDALYRALHPPQSGDHATSHVAL back to topmRNA from alignment at CM002462.1:734570..736950- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4059 ID=rna4059|Name=rna4059|organism=Nannochloropsis gaditana|type=mRNA|length=2381bp|location=Sequence derived from alignment at CM002462.1:734570..736950- (Nannochloropsis gaditana)
ATGTTTGCATGTCGACGTAGCGCTCGAAGTGTTTTTATAACGTCGGCCCA
TTGGCCAAGCAAGATGCTGCTAGCAAGCCGTACTATTTAAACTGTATTGA
AACATATTCTGGACACTGTTTCTGCTTCCTTTTTGTTTGTCGTGGAAGAA
CCGTAAGGCATATAGCCATAAGCCCACGTCTTTGAATGTGGCTTTCGTGA
TCGGCGCACGTTTTGGACACAGGAGGACTTAGTGGAACGTCACGGTGTGA
CAGCAACTTCAAGCTGTTGAACAAGCACCGCTCGTAGCTTCTGGTTCGCT
TATGCAGGACTTGCTGCCGACACTCGGGTTTTTATCACAATCTCGTTTTA
CCCGCACACATACACAGAGTGCTATCAATGCATCTTTTATCCCTACGACA
GCTACATCTAGGCGTGAGCCTAAACAGCAAAGAGCACAGAGCGTTCACAG
CCGGCGCAGTCATAAGTATACTGGGGTTGCTGGCAACGGCTTTCGCCTCG
TTCTCCTCGCTCAAAAAATGGAAGCATCGACGCTATTTAAAAGAGCTCGG
TATAACAAACGGTTCTAAAAATTGCATTGGACTAGCTGTTGATATTGGCA
GCTCCTCAGTGCGATGCAGCGCCTACGTTTTGCGGGTAGATCGTTCTGTC
ACGTTTGTTTCCGGTACTCTCGCACAGATTAAAAGAGACGCCATCGAAAT
CGATGGCACGGCCGACGCCGAAAAAGTTTTGCACGATGTAGAAACATCAG
TGGATGAATGTCTGTGCCGCCTTAGAGCGATGGATTTGGCGCATTTGGTG
TCGGTTGTGGGTTTCGCTTCGTTTGTGATGAACTTGGTGGGGGTGGACCG
ATCGGGGCGGCCCATCACTCCTGTCTTGACATACGCAGATAGGCATCCGA
GCACTGCAACATACGCAAGAAAGTTGCGACAAAGTATGACTGATCGATCG
AACGACGCGTCTCACCTAGAGCGGCCATTTAATCAACCGTCAGGGGGTCA
AAGTAGTGAAAAGGAGACATTATCGGGAAGCACAGCGATGGCAATGGCCA
ACCGATACTTACAATTGTTCAGCGAAGTCGCCACTACCCTGTCAAAGGAT
GACGGGGACTCTGACGTCGCGGATGATGACAAGGGGAAGAGCAAGAGCTC
AAGCCCCAGCCGCATCCAAGGGGGGACTGCCGTGCTACACAACGTGACAG
GGGCGCCTATTCACACGGCATACGCGGCCCCGCAATTGTGGCGATTGGCG
GTGGAGGAGGCGGAGCTGGTAAATCGGGTCTCTAAATGGCAAACGCTTGT
AAGCCTGTGCTTGGCTCGATGGACAGGAGCAACGCATCTGCCCGTCAGCT
TCTCGGAGGCATCTTGGACGGGACTGCTTGATTTTCGCGCGCTGGAGTGG
AGTGCAGCATTAACCTCGATGCTCCCCGTTCCTCGTCTCTCGCTTCCCGA
CCTAGCAGACTATCACCAAGGTCCACACGGGGCCGAACTTGCCCCAGCCT
ACGTCAGCCGCTGGCCTGAGCTATCTCAGGCTCGTTTTCTCTTGGGAGTG
GGGGACGGGGCGTGTGCGAACCTAGGGTCAGGGTGCGGTGACTCGGGACG
CTTGGCTGTCACCATTGGGACCAGCGCCGCCGCACGCGTCGTCATTGCCG
AAGAAGAGCTTCCATCTGGCGGCGAGGATGGCAACCATGGCCGCAGCTCC
CTCGTTCCCCCCGGATTGTGGTGTTACCGCATCGACCGCCGGCGACTCTT
GCTGGGAGGGGCGCTGACTGACGGAGGATCTCTGCTGAAATGGATCTCAG
AGACCTTTCGAGTCGGACCCAACGCAGTCTCGACGGAGTCTCTGGCGGGA
AAGCAGCAGCCGGGGGGGCATGGACTCACGATTTTGCCTTTTCTCAGCGG
GGAGCGCGCCCCCGGTTGGTGCCCGAACGCCACGGCCAGCATCTTGGGCC
TCACGAAGCAGACGACAGGAGCCGACGTGTATCGGGCGGGTATGGAGGCG
GTGGCCCTGAGATTAGCAGCCATAGTCCGCCTGATGCGACCGCACCTGGG
GCAAAACCTGGTTGTCGGCGCGAGTGGCACGGCCTTGGAGCGCTCTGGCC
TCTGGCGGCAGATTCTGGCTGACGCCTTGGGCCTGGAGGTGGTCCTGGAG
GAGCAGGGGGAGGCCACCTCCAAGGGGGTGGCGGCGTTGATGGCGGAGTG
GAGGTTTGAGGAAGAGCCTTTGCGGGAGGCGGCGACGCAGGAGCAAGTCC
TTTTCCGACATACACCCCACCAGGATGCTCATGCTGCCTACCAAGAGGCA
CTCCAGCGGCAGGATGCCTTGTACAGGGCGCTTCATCCGCCTCAGTCTGG
CGACCATGCGACGAGTCATGTCGCTTTGTAA back to topCoding sequence (CDS) from alignment at CM002462.1:734570..736950- >rna4059 ID=rna4059|Name=rna4059|organism=Nannochloropsis gaditana|type=CDS|length=4098bp|location=Sequence derived from alignment at CM002462.1:734570..736950- (Nannochloropsis gaditana)
GCGTGAGCCTAAACAGCAAAGAGCACAGAGCGTTCACAGCCGGCGCAGTC
ATAAGTATACTGGGGTTGCTGGCAACGGCTTTCGCCTCGTTCTCCTCGCT
CAAAAAATGGAAGCATCGACGCTATTTAAAAGAGCTCGGTATAACAAACG
GTTCTAAAAATTGCATTGGACTAGCTGTTGATATTGGCAGCTCCTCAGTG
CGATGCAGCGCCTACGTTTTGCGGGTAGATCGTTCTGTCACGTTTGTTTC
CGGTACTCTCGCACAGATTAAAAGAGACGCCATCGAAATCGATGGCACGG
CCGACGCCGAAAAAGTTTTGCACGATGTAGAAACATCAGTGGATGAATGT
CTGTGCCGCCTTAGAGCGATGGATTTGGCGCATTTGGTGTCGGTTGTGGG
TTTCGCTTCGTTTGTGATGAACTTGGTGGGGGTGGACCGATCGGGGCGGC
CCATCACTCCTGTCTTGACATACGCAGATAGGCATCCGAGCACTGCAACA
TACGCAAGAAAGTTGCGACAAAGTATGACTGATCGATCGAACGACGCGTC
TCACCTAGAGCGGCCATTTAATCAACCGTCAGGGGGTCAAAGTAGTGAAA
AGGAGACATTATCGGGAAGCACAGCGATGGCAATGGCCAACCGATACTTA
CAATTGTTCAGCGAAGTCGCCACTACCCTGTCAAAGGATGACGGGGACTC
TGACGTCGCGGATGATGACAAGGGGAAGAGCAAGAGCTCAAGCCCCAGCC
GCATCCAAGGGGGGACTGCCGTGCTACACAACGTGACAGGGGCGCCTATT
CACACGGCATACGCGGCCCCGCAATTGTGGCGATTGGCGGTGGAGGAGGC
GGAGCTGGTAAATCGGGTCTCTAAATGGCAAACGCTTGTAAGCCTGTGCT
TGGCTCGATGGACAGGAGCAACGCATCTGCCCGTCAGCTTCTCGGAGGCA
TCTTGGACGGGACTGCTTGATTTTCGCGCGCTGGAGTGGAGTGCAGCATT
AACCTCGATGCTCCCCGTTCCTCGTCTCTCGCTTCCCGACCTAGCAGACT
ATCACCAAGGTCCACACGGGGCCGAACTTGCCCCAGCCTACGTCAGCCGC
TGGCCTGAGCTATCTCAGGCTCGTTTTCTCTTGGGAGTGGGGGACGGGGC
GTGTGCGAACCTAGGGTCAGGGTGCGGTGACTCGGGACGCTTGGCTGTCA
CCATTGGGACCAGCGCCGCCGCACGCGTCGTCATTGCCGAAGAAGAGCTT
CCATCTGGCGGCGAGGATGGCAACCATGGCCGCAGCTCCCTCGTTCCCCC
CGGATTGTGGTGTTACCGCATCGACCGCCGGCGACTCTTGCTGGGAGGGG
CGCTGACTGACGGAGGATCTCTGCTGAAATGGATCTCAGAGACCTTTCGA
GTCGGACCCAACGCAGTCTCGACGGAGTCTCTGGCGGGAAAGCAGCAGCC
GGGGGGGCATGGACTCACGATTTTGCCTTTTCTCAGCGGGGAGCGCGCCC
CCGGTTGGTGCCCGAACGCCACGGCCAGCATCTTGGGCCTCACGAAGCAG
ACGACAGGAGCCGACGTGTATCGGGCGGGTATGGAGGCGGTGGCCCTGAG
ATTAGCAGCCATAGTCCGCCTGATGCGACCGCACCTGGGGCAAAACCTGG
TTGTCGGCGCGAGTGGCACGGCCTTGGAGCGCTCTGGCCTCTGGCGGCAG
ATTCTGGCTGACGCCTTGGGCCTGGAGGTGGTCCTGGAGGAGCAGGGGGA
GGCCACCTCCAAGGGGGTGGCGGCGTTGATGGCGGAGTGGAGGTTTGAGG
AAGAGCCTTTGCGGGAGGCGGCGACGCAGGAGCAAGTCCTTTTCCGACAT
ACACCCCACCAGGATGCTCATGCTGCCTACCAAGAGGCACTCCAGCGGCA
GGATGCCTTGTACAGGGCGCTTCATCCGCCTCAGTCTGGCGACCATGCGA
CGAGTCATGTCGCTTTGTAAATGTTTGCATGTCGACGTAGCGCTCGAAGT
GTTTTTATAACGTCGGCCCATTGGCCAAGCAAGATGCTGCTAGCAAGCCG
CGTGAGCCTAAACAGCAAAGAGCACAGAGCGTTCACAGCCGGCGCAGTCA
TAAGTATACTGGGGTTGCTGGCAACGGCTTTCGCCTCGTTCTCCTCGCTC
AAAAAATGGAAGCATCGACGCTATTTAAAAGAGCTCGGTATAACAAACGG
TTCTAAAAATTGCATTGGACTAGCTGTTGATATTGGCAGCTCCTCAGTGC
GATGCAGCGCCTACGTTTTGCGGGTAGATCGTTCTGTCACGTTTGTTTCC
GGTACTCTCGCACAGATTAAAAGAGACGCCATCGAAATCGATGGCACGGC
CGACGCCGAAAAAGTTTTGCACGATGTAGAAACATCAGTGGATGAATGTC
TGTGCCGCCTTAGAGCGATGGATTTGGCGCATTTGGTGTCGGTTGTGGGT
TTCGCTTCGTTTGTGATGAACTTGGTGGGGGTGGACCGATCGGGGCGGCC
CATCACTCCTGTCTTGACATACGCAGATAGGCATCCGAGCACTGCAACAT
ACGCAAGAAAGTTGCGACAAAGTATGACTGATCGATCGAACGACGCGTCT
CACCTAGAGCGGCCATTTAATCAACCGTCAGGGGGTCAAAGTAGTGAAAA
GGAGACATTATCGGGAAGCACAGCGATGGCAATGGCCAACCGATACTTAC
AATTGTTCAGCGAAGTCGCCACTACCCTGTCAAAGGATGACGGGGACTCT
GACGTCGCGGATGATGACAAGGGGAAGAGCAAGAGCTCAAGCCCCAGCCG
CATCCAAGGGGGGACTGCCGTGCTACACAACGTGACAGGGGCGCCTATTC
ACACGGCATACGCGGCCCCGCAATTGTGGCGATTGGCGGTGGAGGAGGCG
GAGCTGGTAAATCGGGTCTCTAAATGGCAAACGCTTGTAAGCCTGTGCTT
GGCTCGATGGACAGGAGCAACGCATCTGCCCGTCAGCTTCTCGGAGGCAT
CTTGGACGGGACTGCTTGATTTTCGCGCGCTGGAGTGGAGTGCAGCATTA
ACCTCGATGCTCCCCGTTCCTCGTCTCTCGCTTCCCGACCTAGCAGACTA
TCACCAAGGTCCACACGGGGCCGAACTTGCCCCAGCCTACGTCAGCCGCT
GGCCTGAGCTATCTCAGGCTCGTTTTCTCTTGGGAGTGGGGGACGGGGCG
TGTGCGAACCTAGGGTCAGGGTGCGGTGACTCGGGACGCTTGGCTGTCAC
CATTGGGACCAGCGCCGCCGCACGCGTCGTCATTGCCGAAGAAGAGCTTC
CATCTGGCGGCGAGGATGGCAACCATGGCCGCAGCTCCCTCGTTCCCCCC
GGATTGTGGTGTTACCGCATCGACCGCCGGCGACTCTTGCTGGGAGGGGC
GCTGACTGACGGAGGATCTCTGCTGAAATGGATCTCAGAGACCTTTCGAG
TCGGACCCAACGCAGTCTCGACGGAGTCTCTGGCGGGAAAGCAGCAGCCG
GGGGGGCATGGACTCACGATTTTGCCTTTTCTCAGCGGGGAGCGCGCCCC
CGGTTGGTGCCCGAACGCCACGGCCAGCATCTTGGGCCTCACGAAGCAGA
CGACAGGAGCCGACGTGTATCGGGCGGGTATGGAGGCGGTGGCCCTGAGA
TTAGCAGCCATAGTCCGCCTGATGCGACCGCACCTGGGGCAAAACCTGGT
TGTCGGCGCGAGTGGCACGGCCTTGGAGCGCTCTGGCCTCTGGCGGCAGA
TTCTGGCTGACGCCTTGGGCCTGGAGGTGGTCCTGGAGGAGCAGGGGGAG
GCCACCTCCAAGGGGGTGGCGGCGTTGATGGCGGAGTGGAGGTTTGAGGA
AGAGCCTTTGCGGGAGGCGGCGACGCAGGAGCAAGTCCTTTTCCGACATA
CACCCCACCAGGATGCTCATGCTGCCTACCAAGAGGCACTCCAGCGGCAG
GATGCCTTGTACAGGGCGCTTCATCCGCCTCAGTCTGGCGACCATGCGAC
GAGTCATGTCGCTTTGTAAATGTTTGCATGTCGACGTAGCGCTCGAAGTG
TTTTTATAACGTCGGCCCATTGGCCAAGCAAGATGCTGCTAGCAAGCC back to top
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