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Properties
| Property Name | Value |
|---|
| Product | calcium-dependent phospholipid-binding copine-like protein |
| Orig transcript id | gnl|cribi|Naga_100001g56.8265.mrna |
| Orig protein id | gnl|cribi|Naga_100001g56.8265 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:729469..731974 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4057 ID=rna4057|Name=rna4057|organism=Nannochloropsis gaditana|type=mRNA|length=921bp
GTTGCCCGTGTGGCCGATCATTCAGCAATTAAACTTTACCCGAGCTAAAC
GAATCTTCAATTTTTAACCTGGCCCGCGCCATCCTCGATCACAGTGGCTT
TCATTACCACACTCCATCCTTCGCTTGTGACAGACAGCACGAGTACCAGG
CGACAGAAAGAAGTCCGGAGATAATCAATATGTCATATAAAAATGCAGGA
AAGACGAAAAAGCTCGTCCAGTTGACCGAAGAGCAAAGGCAAGAAATCAA
GGAAGCGTTTGAATTGTTCGACACTGAGGGCACCGGCCGCATTGATAGCA
AGGAATTACGTGTTGCAATGCGAGCTCTGGGCTTTGAGCCCAAAAAAGAG
GAGGTCATGCGACTCGCGGCAGCGGCAGACGACGACAACTCGGGGACGAT
AACCTACAAGAAGTTTGTGGAAATGATGACAGTTAAAATGGGGGAGAAAG
ATGGACGCGAAGAAATGGTTAAAGCTTTCCGGTTATTCGACGCTGGAGAG
AAGGGAGCTATTAGCTTTCAAGACTTGAGGCGTGTTGCCCGAGAGCTTGG
AGAGTCCATCACAGACGAGGAGTTGCAGGAAATGATTGATGAAGCTGATC
GGGACGGCGATGGGCTTGTGAGTGAAGAAGACTTCATGCGAATTATGAAA
AAAACAAATCTTTTTTGAGGGGGAGCATGGTATAGCGGAAAACATGGGAA
AAAAAAACATAAAACAATATGTATCTTTTGAATAAAATTACCGCAGAGTA
CATGGTGTAACAAGAATTTCTTTTCGCTCGACTGTTGCGCTTCAAGATGA
AAGAGTAAATAAGGGTGTATTTGTTACCAGACGACGAAAGCAAAAGGGGA
AAATCTCCACGATATACGTCCTGGCAAAAGGACAGATAATCTCACGAAGT
CGTGTGTGTAAGAATCTTTTT back to topprotein sequence of rna4057 >rna4057-protein ID=rna4057-protein|Name=rna4057|organism=Nannochloropsis gaditana|type=polypeptide|length=640bp
MGNSVAGIPIDVEEGTETLPNSRSSSERPRSNRAHDKEKSPMLQTKQGVP
GCTSRLLLSISCPSREEHKLVMVVSMQHGKDNPQWQELGRTRLKLNQYSD
SNCYSLRKVPLDFHFELTQTIKIDVYTAANDEDDDEDDALDAFQGSMMCL
LSELCAAPDRTVSFPIEQKPSHSLFNDIRLQLDVTAEKVEYQNSSLRVKL
KGEHFRHVLGSQGKEKYYVCVCRTHARQGEISKERAQKLIIHSTEAISFA
RKSSLPDGPPPSWRSFEVNMLDLCDGDVLQSIIVEIWMQNTGSGQPHLVG
EICTTVQDLLKAKASATLPVPGSGSLPAKLVLQSARMITRPTFLDFIHGG
CQLSLLTAIDFTAYNGPSEDPDSLHFCGPGHSPLTAYQAAIKAITTTLAP
YTSGYFPVFGFGAKPKESGKDVPTSHGFACSGSLRQAEVLGVNGVLGVYK
SCLERMTFSKPRRFAQIIAEAGRHASEFHKALDQKYVVLLLLTNGVSEDM
DQTIGEIIRASSLPLSILIVGIGGADFEPLKNALRITNCTYDSHGMVEAK
KNYCMTRSPLKNARTMATRDMVRLATYRDVLQRLHSTSNSYSSSANVHEL
LAQNLLLELPRQICSYFSCHNIQPRAPQMRSPRIPPISQT back to topmRNA from alignment at CM002462.1:729469..731974+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4057 ID=rna4057|Name=rna4057|organism=Nannochloropsis gaditana|type=mRNA|length=2506bp|location=Sequence derived from alignment at CM002462.1:729469..731974+ (Nannochloropsis gaditana)
CATTACAGACTTCAAAACTACGTATTGCTGTGTGTAACGCTAAACTAGGT
AAttggaagaaaggaagtagAATCCGGACTCGGTGAAGTCAATGGGAAAT
TCAGTAGCAGGAATCCCAATCGATGTTGAAGAAGGCACGGAGACATTGCC
AAACAGTCGGAGCAGCAGTGAGCGTCCGCGAAGTAATCGCGCACACGATA
AGGAAAAGAGTCCGATGCTCCAGACAAAGCAAGGAGTGCCAGGGTAAGTA
CGCttcttttttatttttcgGTGCCTTTCGAAGAGAAGGGTACATCCTAC
TCATCAGCATTCGGCGTTGAAACACTTTGACTTTTTTATTATTTGAGATG
TGTGATAGCTCTGCCAGATGTAGTATCTACTTATGGATCCCTTCATACAT
CAATGACTTACAGTGAATTGAGTTTCTAACAAAGGAATCTGTTTTGTCTT
TTATTCATAAGCCTCTCCCACAAACAAAACttaccacctcccccttaTTA
TTAACTGATTTCAGATGCACTTCCAGGTTGCTTTTATCTATTTCATGTCC
ATCCAGAGAGGAACACAAGCTGGTAATGGTAGTTTCCATGCAGCACGGTA
AAGACAATCCGCAATGGCAGGAGCTCGGTCGAACTCGACTCAAACTAAAC
CAATACAGTGACTCCAACTGCTATTCTCTGCGAAAAGTGCCTCTGGATTT
TCATTTTGAGCTCACACAAACAATAAAAATCGACGTATACACTGCTGCAA
ACGATGAAGACGATGACGAAGACGATGCGTTGGACGCTTTTCAAGGATCC
ATGATGTGCCTCCTCTCCGAGCTGTGCGCTGCCCCAGATCGCACAGTCTC
ATTTCCTATTGAACAAAAACCTTCCCACTCCTTATTCAATGACATACGAT
TACAGTTGGATGTAACAGCAGAAAAAGTAGAGTATCAAAATTCCTCGCTG
CGGGTGAAGCTCAAAGGAGAACATTTCAGACATGTTCTGGGTTctcaagg
aaaagaaaaatattACGTTTGCGTTTGCCGAACGCATGCACGACAAGGAG
AAATTTCAAAAGAACGAGCACAAAAGCTAATCATCCACTCCACCGAAGCA
ATTTCCTTCGCAAGAAAGTCGTCCCTTCCCGATGGTCCACCTCCGTCTTG
GCGGAGCTTCGAAGTCAACATGCTCGACCTCTGCGATGGAGACGTGCTTC
AATCCATCATCGTAGAAATCTGGATGCAAAACACAGGTTCAGGCCAGCCG
CATCTTGTCGGTGAGATTTGCACCACAGTCCAAGATCTCTTGaaggccaa
ggcctctgcGACATTGCCTGTCCCTGGTTCGGGATCCTTGCCCGCAAAGC
TGGTCTTGCAGTCGGCCCGGATGATTACTCGGCCTACTTTCCTGGATTTC
ATACATGGTGGATGCCAGCTGTCTTTGTTGACTGCCATAGATTTTACAGC
ATACAAGTAAGTGTTTTGACATGTGGATCGGCCTCTGCCTGTCGTCTGCG
TCCGTCGGTCCATGTCCATTTCCGCGACTGTCTCACGAGATTCATGTTTC
TTTTCTTACACAGTGGCCCATCCGAGGATCCCGATTCCCTTCATTTCTGT
GGACCTGGCCATTCCCCCCTTACGGCGTACCAAGCGGCTATCAAGGCCAT
CACAACTACACTTGCACCCTATACAAGCGGGTACTTCCCTGTCTTCGGCT
TCGGAGCTAAACCAAaagagagcgggaaggaTGTACCCACGTCCCATGGA
TTTGCGTGCAGCGGTAGCCTGAGGCAGGCGGAAGTGCTTGGAGTAAATGG
TGTCCTGGGCGTATACAAGTCTTGTCTCGAGCGTATGACGTTTTCAAAAC
CTCGACGCTTCGCACAAATCATCGCTGAGGCCGGTAGACACGCCTCGGAA
TTTCACAAGGCTTTGGACCAGAAGTATGTCGTGCTACTGCTGCTCACTAA
TGGAGTGAGCGAAGATATGGATCAAACAATAGGCGAAATCATACGAGCCT
CGTCTTTGCCTCTGTCAATTTTGATTGTTGGAATTGGGGGTGCCGATTTC
GAACCCCTCAAAAATGCGCTTAGGATCACCAACTGCACATATGACTCGCA
CGGCATGGTCGAAGCGAAGAAAAATTACTGCATGACACGGTCACCTCTCA
AAAACGCCAGAACAATGGCAACCCGCGACATGGTTCGACTTGCTACGTAT
CGCGATGTGCTCCAAAGGTTGCACAGCACGTCAAATTCATATTCTTCGTC
GGCTAATGTTCACGAGCTACTAGCCCAAAACTTACTTTTGGAGCTGCCGC
GCCAAATATGCTCCTATTTTTCCTGCCATAACATCCAACCACGTGCTCCT
CAAATGCGGTCCCCGCGCATACCTCCGATATCACAAACTTAAGCTGCTGC
TGAGCAGGTATCTGACCAACGGTTTTGACACTGTGATGCGCCATATTTGA
AGAAACTTAAATTTGCTGCAATTCATTGGCACCTTGCAGCATGCAACGTA
TCGCTA back to topCoding sequence (CDS) from alignment at CM002462.1:729469..731974+ >rna4057 ID=rna4057|Name=rna4057|organism=Nannochloropsis gaditana|type=CDS|length=5769bp|location=Sequence derived from alignment at CM002462.1:729469..731974+ (Nannochloropsis gaditana)
ATGGGAAATTCAGTAGCAGGAATCCCAATCGATGTTGAAGAAGGCACGGA
GACATTGCCAAACAGTCGGAGCAGCAGTGAGCGTCCGCGAAGTAATCGCG
CACACGATAAGGAAAAGAGTCCGATGCTCCAGACAAAGCAAGGAGTGCCA
GGATGCACTTCCAGGTTGCTTTTATCTATTTCATGTCCATCCAGAGAGGA
ACACAAGCTGGTAATGGTAGTTTCCATGCAGCACGGTAAAGACAATCCGC
AATGGCAGGAGCTCGGTCGAACTCGACTCAAACTAAACCAATACAGTGAC
TCCAACTGCTATTCTCTGCGAAAAGTGCCTCTGGATTTTCATTTTGAGCT
CACACAAACAATAAAAATCGACGTATACACTGCTGCAAACGATGAAGACG
ATGACGAAGACGATGCGTTGGACGCTTTTCAAGGATCCATGATGTGCCTC
CTCTCCGAGCTGTGCGCTGCCCCAGATCGCACAGTCTCATTTCCTATTGA
ACAAAAACCTTCCCACTCCTTATTCAATGACATACGATTACAGTTGGATG
TAACAGCAGAAAAAGTAGAGTATCAAAATTCCTCGCTGCGGGTGAAGCTC
AAAGGAGAACATTTCAGACATGTTCTGGGTTctcaaggaaaagaaaaata
ttACGTTTGCGTTTGCCGAACGCATGCACGACAAGGAGAAATTTCAAAAG
AACGAGCACAAAAGCTAATCATCCACTCCACCGAAGCAATTTCCTTCGCA
AGAAAGTCGTCCCTTCCCGATGGTCCACCTCCGTCTTGGCGGAGCTTCGA
AGTCAACATGCTCGACCTCTGCGATGGAGACGTGCTTCAATCCATCATCG
TAGAAATCTGGATGCAAAACACAGGTTCAGGCCAGCCGCATCTTGTCGGT
GAGATTTGCACCACAGTCCAAGATCTCTTGaaggccaaggcctctgcGAC
ATTGCCTGTCCCTGGTTCGGGATCCTTGCCCGCAAAGCTGGTCTTGCAGT
CGGCCCGGATGATTACTCGGCCTACTTTCCTGGATTTCATACATGGTGGA
TGCCAGCTGTCTTTGTTGACTGCCATAGATTTTACAGCATACAATGGCCC
ATCCGAGGATCCCGATTCCCTTCATTTCTGTGGACCTGGCCATTCCCCCC
TTACGGCGTACCAAGCGGCTATCAAGGCCATCACAACTACACTTGCACCC
TATACAAGCGGGTACTTCCCTGTCTTCGGCTTCGGAGCTAAACCAAaaga
gagcgggaaggaTGTACCCACGTCCCATGGATTTGCGTGCAGCGGTAGCC
TGAGGCAGGCGGAAGTGCTTGGAGTAAATGGTGTCCTGGGCGTATACAAG
TCTTGTCTCGAGCGTATGACGTTTTCAAAACCTCGACGCTTCGCACAAAT
CATCGCTGAGGCCGGTAGACACGCCTCGGAATTTCACAAGGCTTTGGACC
AGAAGTATGTCGTGCTACTGCTGCTCACTAATGGAGTGAGCGAAGATATG
GATCAAACAATAGGCGAAATCATACGAGCCTCGTCTTTGCCTCTGTCAAT
TTTGATTGTTGGAATTGGGGGTGCCGATTTCGAACCCCTCAAAAATGCGC
TTAGGATCACCAACTGCACATATGACTCGCACGGCATGGTCGAAGCGAAG
AAAAATTACTGCATGACACGGTCACCTCTCAAAAACGCCAGAACAATGGC
AACCCGCGACATGGTTCGACTTGCTACGTATCGCGATGTGCTCCAAAGGT
TGCACAGCACGTCAAATTCATATTCTTCGTCGGCTAATGTTCACGAGCTA
CTAGCCCAAAACTTACTTTTGGAGCTGCCGCGCCAAATATGCTCCTATTT
TTCCTGCCATAACATCCAACCACGTGCTCCTCAAATGCGGTCCCCGCGCA
TACCTCCGATATCACAAACTTAAATGGGAAATTCAGTAGCAGGAATCCCA
ATCGATGTTGAAGAAGGCACGGAGACATTGCCAAACAGTCGGAGCAGCAG
TGAGCGTCCGCGAAGTAATCGCGCACACGATAAGGAAAAGAGTCCGATGC
TCCAGACAAAGCAAGGAGTGCCAGGATGCACTTCCAGGTTGCTTTTATCT
ATTTCATGTCCATCCAGAGAGGAACACAAGCTGGTAATGGTAGTTTCCAT
GCAGCACGGTAAAGACAATCCGCAATGGCAGGAGCTCGGTCGAACTCGAC
TCAAACTAAACCAATACAGTGACTCCAACTGCTATTCTCTGCGAAAAGTG
CCTCTGGATTTTCATTTTGAGCTCACACAAACAATAAAAATCGACGTATA
CACTGCTGCAAACGATGAAGACGATGACGAAGACGATGCGTTGGACGCTT
TTCAAGGATCCATGATGTGCCTCCTCTCCGAGCTGTGCGCTGCCCCAGAT
CGCACAGTCTCATTTCCTATTGAACAAAAACCTTCCCACTCCTTATTCAA
TGACATACGATTACAGTTGGATGTAACAGCAGAAAAAGTAGAGTATCAAA
ATTCCTCGCTGCGGGTGAAGCTCAAAGGAGAACATTTCAGACATGTTCTG
GGTTctcaaggaaaagaaaaatattACGTTTGCGTTTGCCGAACGCATGC
ACGACAAGGAGAAATTTCAAAAGAACGAGCACAAAAGCTAATCATCCACT
CCACCGAAGCAATTTCCTTCGCAAGAAAGTCGTCCCTTCCCGATGGTCCA
CCTCCGTCTTGGCGGAGCTTCGAAGTCAACATGCTCGACCTCTGCGATGG
AGACGTGCTTCAATCCATCATCGTAGAAATCTGGATGCAAAACACAGGTT
CAGGCCAGCCGCATCTTGTCGGTGAGATTTGCACCACAGTCCAAGATCTC
TTGaaggccaaggcctctgcGACATTGCCTGTCCCTGGTTCGGGATCCTT
GCCCGCAAAGCTGGTCTTGCAGTCGGCCCGGATGATTACTCGGCCTACTT
TCCTGGATTTCATACATGGTGGATGCCAGCTGTCTTTGTTGACTGCCATA
GATTTTACAGCATACAATGGCCCATCCGAGGATCCCGATTCCCTTCATTT
CTGTGGACCTGGCCATTCCCCCCTTACGGCGTACCAAGCGGCTATCAAGG
CCATCACAACTACACTTGCACCCTATACAAGCGGGTACTTCCCTGTCTTC
GGCTTCGGAGCTAAACCAAaagagagcgggaaggaTGTACCCACGTCCCA
TGGATTTGCGTGCAGCGGTAGCCTGAGGCAGGCGGAAGTGCTTGGAGTAA
ATGGTGTCCTGGGCGTATACAAGTCTTGTCTCGAGCGTATGACGTTTTCA
AAACCTCGACGCTTCGCACAAATCATCGCTGAGGCCGGTAGACACGCCTC
GGAATTTCACAAGGCTTTGGACCAGAAGTATGTCGTGCTACTGCTGCTCA
CTAATGGAGTGAGCGAAGATATGGATCAAACAATAGGCGAAATCATACGA
GCCTCGTCTTTGCCTCTGTCAATTTTGATTGTTGGAATTGGGGGTGCCGA
TTTCGAACCCCTCAAAAATGCGCTTAGGATCACCAACTGCACATATGACT
CGCACGGCATGGTCGAAGCGAAGAAAAATTACTGCATGACACGGTCACCT
CTCAAAAACGCCAGAACAATGGCAACCCGCGACATGGTTCGACTTGCTAC
GTATCGCGATGTGCTCCAAAGGTTGCACAGCACGTCAAATTCATATTCTT
CGTCGGCTAATGTTCACGAGCTACTAGCCCAAAACTTACTTTTGGAGCTG
CCGCGCCAAATATGCTCCTATTTTTCCTGCCATAACATCCAACCACGTGC
TCCTCAAATGCGGTCCCCGCGCATACCTCCGATATCACAAACTTAAATGG
GAAATTCAGTAGCAGGAATCCCAATCGATGTTGAAGAAGGCACGGAGACA
TTGCCAAACAGTCGGAGCAGCAGTGAGCGTCCGCGAAGTAATCGCGCACA
CGATAAGGAAAAGAGTCCGATGCTCCAGACAAAGCAAGGAGTGCCAGGAT
GCACTTCCAGGTTGCTTTTATCTATTTCATGTCCATCCAGAGAGGAACAC
AAGCTGGTAATGGTAGTTTCCATGCAGCACGGTAAAGACAATCCGCAATG
GCAGGAGCTCGGTCGAACTCGACTCAAACTAAACCAATACAGTGACTCCA
ACTGCTATTCTCTGCGAAAAGTGCCTCTGGATTTTCATTTTGAGCTCACA
CAAACAATAAAAATCGACGTATACACTGCTGCAAACGATGAAGACGATGA
CGAAGACGATGCGTTGGACGCTTTTCAAGGATCCATGATGTGCCTCCTCT
CCGAGCTGTGCGCTGCCCCAGATCGCACAGTCTCATTTCCTATTGAACAA
AAACCTTCCCACTCCTTATTCAATGACATACGATTACAGTTGGATGTAAC
AGCAGAAAAAGTAGAGTATCAAAATTCCTCGCTGCGGGTGAAGCTCAAAG
GAGAACATTTCAGACATGTTCTGGGTTctcaaggaaaagaaaaatattAC
GTTTGCGTTTGCCGAACGCATGCACGACAAGGAGAAATTTCAAAAGAACG
AGCACAAAAGCTAATCATCCACTCCACCGAAGCAATTTCCTTCGCAAGAA
AGTCGTCCCTTCCCGATGGTCCACCTCCGTCTTGGCGGAGCTTCGAAGTC
AACATGCTCGACCTCTGCGATGGAGACGTGCTTCAATCCATCATCGTAGA
AATCTGGATGCAAAACACAGGTTCAGGCCAGCCGCATCTTGTCGGTGAGA
TTTGCACCACAGTCCAAGATCTCTTGaaggccaaggcctctgcGACATTG
CCTGTCCCTGGTTCGGGATCCTTGCCCGCAAAGCTGGTCTTGCAGTCGGC
CCGGATGATTACTCGGCCTACTTTCCTGGATTTCATACATGGTGGATGCC
AGCTGTCTTTGTTGACTGCCATAGATTTTACAGCATACAATGGCCCATCC
GAGGATCCCGATTCCCTTCATTTCTGTGGACCTGGCCATTCCCCCCTTAC
GGCGTACCAAGCGGCTATCAAGGCCATCACAACTACACTTGCACCCTATA
CAAGCGGGTACTTCCCTGTCTTCGGCTTCGGAGCTAAACCAAaagagagc
gggaaggaTGTACCCACGTCCCATGGATTTGCGTGCAGCGGTAGCCTGAG
GCAGGCGGAAGTGCTTGGAGTAAATGGTGTCCTGGGCGTATACAAGTCTT
GTCTCGAGCGTATGACGTTTTCAAAACCTCGACGCTTCGCACAAATCATC
GCTGAGGCCGGTAGACACGCCTCGGAATTTCACAAGGCTTTGGACCAGAA
GTATGTCGTGCTACTGCTGCTCACTAATGGAGTGAGCGAAGATATGGATC
AAACAATAGGCGAAATCATACGAGCCTCGTCTTTGCCTCTGTCAATTTTG
ATTGTTGGAATTGGGGGTGCCGATTTCGAACCCCTCAAAAATGCGCTTAG
GATCACCAACTGCACATATGACTCGCACGGCATGGTCGAAGCGAAGAAAA
ATTACTGCATGACACGGTCACCTCTCAAAAACGCCAGAACAATGGCAACC
CGCGACATGGTTCGACTTGCTACGTATCGCGATGTGCTCCAAAGGTTGCA
CAGCACGTCAAATTCATATTCTTCGTCGGCTAATGTTCACGAGCTACTAG
CCCAAAACTTACTTTTGGAGCTGCCGCGCCAAATATGCTCCTATTTTTCC
TGCCATAACATCCAACCACGTGCTCCTCAAATGCGGTCCCCGCGCATACC
TCCGATATCACAAACTTAA back to top
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