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Properties
| Property Name | Value |
|---|
| Product | bis(5 -nucleosyl)- symmetrical |
| Orig transcript id | gnl|cribi|Naga_100001g66.8208.mrna |
| Orig protein id | gnl|cribi|Naga_100001g66.8208 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:705130..706513 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4047 ID=rna4047|Name=rna4047|organism=Nannochloropsis gaditana|type=mRNA|length=5834bp
AGCCTGAAGATCAGACGTAGCGGCTGTGTTCAATCTGGGACAGGTGTGGC
GTCCTAAGGGAGGAAACGTTGGAGGACGTTGATCCGCGGCTGGCAAAGTC
GCGATGCTGCTGGGCAGCGGCGGGCGCAGGCAGGGTGAAGGCAGGTGGCC
AGTGCTAGTGGTGGGGACAATTGTCACGGACGAAGCGGAACGAATATGCC
ACAAAAATGGTCTCCTCTTCCATGAACTGCTGAGCGCATTTTCCGTGGCT
GACAGCGCTGTTCCCTTTAGGTCCGTGTCACACACAGTGCAGCTGCATGA
CTTCCGGGTGAGTTTCGTTCAGGCCAGCGAGATGGCCGCTCGCCCGCAAG
CCCTGACCGAGGCTCGTCTTGCTGAGGCCCTTACTCTTCGGGAAGGGACA
CCAGAGGCTGAGAGTGCGTGGCTCTCTTTCGAGGAGGAGGAGAGTGGGGC
TGTTGTAAATGTACGGGAGCGTGACGACATAGGCGACGCCTTAGCTGTAC
ACGATGATCGCATGCCATGGTACCGGCGTTTTCGGGCATCTTTGCGACAA
TCCCTCCACTACGTTGAGCCTGAAATGCTGAGGTGCCCAGCTGCCCTGCT
GGTTGTCGTGTCGTCCTCGGACCAGACTCCAATAGACCGGTTTAAGGAGC
TTTCCTTGCCTTGCCACCTGCCAGCCGCCTTTCAAACGGGTCAATTCGGG
AGTCAAGACGTGCCGATTGTCTATTTGCTGCTTCACGATGAGTGGGAAGG
AAACGAGAGAGGGAACGGCCTTGTCTGTGCCGCAGAATTGCTTAGGCAAA
TGAAAAGCGAGCTTCCCACCGCCCCCTCCAAGCTCCTCCGCCTGAACTCG
CTCCCGCCCCACTCCCTTAACCTGAACCAGGCCGCCATCTGGCGCCTGCC
CTCGGAGGTCGACGAGCCCTCGGCCGACAGCTTCTTCCTCAACGACCCCA
ATGACCCGCGGCAGCGCCACCCCGTGCTGGGCGGGGACGGGGCCCGCGGC
GCCTGCCTGAGCAGCGAGGACCTGCTCAACCTGAGGGAGCTGGCCCTCGA
GCTGACCGAGAAGATCGTCATCCCCGCCGTGGAGCGCCGTGTCTTCACCC
TGCAGACCACTGTCACGCAGTCTCGCAAGGGCGTCAAGAACTTTGTCCGC
TCCCTCTGGCGCAAACCGCGAGAGGCGGTCGCCAGCACCAACGAGCAGCA
GCCGCAGGACGGCGCGACCAGTCGCTCGGGCCCTTCCTCTGCCGCGAGCC
TGGTAGCCTCCTGCTCCCCCGCGCTTTATCGCTTTGACCGGATCGAATCT
CAGATTCGTCTCTTGGCCGACAGCCTGTTCGTGATGCAGGACTACGAGGC
GGCCCTGGGCCATTACAAGCTCGTCCGCGACGACTTCAAAGCCGACAAGG
CCTGGATGCACCTGGGTTCAGTCTATGAAATGATCGCCCTTTGCTACCAC
CACCTCAGTCACAGCACAGTTGGGAACGAGGGCTCGCACTCTGCGGGTGG
CCCGTCCTCTCATTCGGGGGGGGATGGACGCTACCGCAGGGAGATGGAGG
GGGCGATCGAAGACGCTCTCAAGGCGTATTTCCGGCAGGTGGAGGAGGAG
GAGCATGCCTCCGACCATCTCACCGGGCCCGGAAACGGGCCAAAGGATCC
AGGCAGTAGGGCCGGCAGTCTTGCGGCGCGCATGGCCACCCGCGCCAGTT
TGTTGGGAACGGAGTACTTGCTAGCGGCTAGCCCGCCCAAAGCCGTAGAC
GCTGCTACGCTGCTGGTGAACGCCGCGCGAAAGGAGACCCCTTTGTGTGC
CGCCGTCCTGCTCGAGCAAGCAGCCTGGGCATTTCTTCACGGCGGGAACA
TGCGCAAGTTCGCCTTCTACATGAACATGGCGGGACGGGCCTTCTTGGCG
TGTGAGGCCCCCTACCCACCCCTCAAACGTCAAGCGATCCGCTGCTACGC
GAGCACCTTGGGTTTGTACCAAGACAGCAGTTGGCGGTATATCCTTGAAG
ACATTCATTCTACTCTAGGCCGAGAACTGCTCAAGCTAGGGCAGCCAGAA
AGGGGGCTCTATCACTTGCTGCGCTTGCTGATGCGTGGGGGCGCCTTCTC
ACCACAGCTTCCTGGGAGGAGCGGGCTTTCCCCTCAGGAGCAAAAGGGCT
TGGTCCGGGAGTTGCTGCAGGCCTGTCGAATTCGGCCCCGGGTATTGGCG
TGGGTTATCCCTCGCTTGGAATGCGGCCTAAAAACGTTTGTAGCAGCCTT
GCACAGAGCGGGGCCACGAGAGCAACCGCCAGACGAAGCACACAGTCACG
AGGAGCAGGCCTTGTCCTCCGTGATGGTGGCCGGTCTGCAAGTGCCGCTG
GTCTTGGAGGAGACTTTGCGTGTGGTTCAGGGCAACGAGGAGCCCCTGGG
GAGAGAAGTGGAGGAGATGAAAAGAGAGCTCGAGCGGGAACTAAAAACAG
CGGCTGTGATGGGAGAGAAGGGGGGAAGCATGCGGGAGTGGGTGCGAGCG
CTTGGAAGAGTGGCGAAAGAAGAGGCGCGAGCGGCCGCTTTTTTGGCAGG
TGGTCATCGCGATGATGCATCGCGTGCAGGGAGAGGGATTTGTTGGCGGG
GCCGAGACGAGCCCATTACAGTCAGCGTGGACGTGGCAAACCCCCTAGAC
TTCCCCATCACGTTGACCGACATGCAGATAACTGCATCTTTCGAAGACGA
AGCGCCACCATTCCAGCCTCCTCGGCCGCCATCTTTCACGGCATCCGCAG
CCCCCGGGATCCAGCCTCTAAGCGTAGAGGCTGTGTCAGTAGCACTCGCT
CCCTCCGAGCGCAAATGCCTGCACCTACGCATCCACCCGCGACGCTGTGG
GATCCTGCGTGTGACAGGCCTTCGCTGGCGATTGTTGGGGGAGTTGTGGG
GAAGCTTGGTGTTTCAGAGCCCCGGGCCCCTCTTACAGGGCACCCTGCAG
CAGCGTGCGAGCCGAGCGCGGGGGCCGGACGTCCGACTAGTCTCTCGAGT
GGTGCCGGAGCTGCCTTTGCTGGAGGTGGAGTGGGAAGGCTTGCCCGAGA
CCGTTTTCCAAGGAGAGATGGTGCAGGCCGCCTTGAGAATCACGAACCGG
GGACTCGCGCCGGCCGCGCATGTCTACGCGAAGAGCAGCCTGCCCTCCTG
GGTCTTCATGCAGGACCCGGCGATGGTTTCGACGGTGGGGGGCAGGGCGG
GGCCCGCGATGGGTGCGGGTGTGTGCATGAGCATGGTAGGAGTGAGTGGT
ACCGTCTTCCGGGTCGTGACAGGCGCGTTGCCCGCGGGGGGGGGTTGTGT
CAGGATCCCTGTATGGGTGAGGGGGCTGGGGGGGGGGAAACAAAGGCTTA
GGATCCTCGTCCGTTACGAGCGTCAGCGAATTGAAGGAGTACAAACGACC
GCCGAAGATGGCAAGAACGGCGGGCTAGGCTCAATGCTGGGCGAGAACTA
CCGATTCGCAGAGGTCTCAAAGGAATTGTGCGTCCTCCCATCCATTGCTG
TGACTCCCTCGGTGTCACCCTCGTACTCCCGACCCGGCGAATGCGTCCTG
TCCCTCAACGTGTCAAACTACCGCACGGACGGGCGGGCGGTTGATCGACA
GGTGGAGCTTCATTCGGTCATGGCTCTTAGCCGACTTTGGACACTCAAAC
CCCTGGAGGGCTTTTCTGCCCTCCCTGAGGATAGTAAAGGAGCTGCTGGA
AACCTCGTCGTTGACTGGCAAGAGCGCACTACGCTGCACTATCGGCTCGC
ACCTGTGGAAAAAGAAGGGGAACCTATGGTATTCGAGCACAATCTGCACA
CCGGAGCCTTGCAGGTATCTTCGCCCCCGTCGCCCAACCCTCCATCCCTG
CCTCCGCCTCAGGCTCCCGGCTTGGCCGGCTCGTCCTGGACGTCCCTGGA
CTTCCTGTACGTGGAAAATGCCAGCCAGTCCTACCGCACCGCTCGCGAGG
AGGCAAGACGTCGGGAGGCCGCCTCTGCGTCCTCTGTCTCGTCCTCCACG
GCCTCCGAGGAGACGGGCGGGCGTCGTGAGCGTCTCCCTCTCAGCCTCGG
AGAGATCAAACGCAAAGAAGCGGAAAAGAGGGCTCGCGAAGCCGCCGTCC
TTGCCGATAGGAGAGCGGCTGACAGCTCTACGGTGGGTTCCACCCCCTCT
ACCCCCGCCCCGGACCCGTCCTCCCCCACCGCTCGCTCCAGATCGCCCAT
GCTCGGCATGGGCATGGAGGGCTCCGGCCACGGAGGGCACCTGGCCGCCC
TGGTCCCCCGCGGACGTGCAACAATCAACCTCCTCCTGACCTGGCGCCTG
GCAACGACTGTCTACACGCCTCAAAGTCCCGCAGCCCAGGCGGAGGCGGC
CAGCTCGCGGACTATGGACTCCGGCGACATCCTCCCGTGCCAGCGTGTGT
GCCGGGGTCAGCATCAGATCCTAAACCACGCCGTTCGCCCCCTGACCCTC
GACCCTACCACCGCCGCTCCCCTGACCATCACTGTGGACGCCCCCTCCCA
AGTCTGGGGGTGCCTGGGGCCCGAAGGGCTCCTCCATAAATGCCAGGTGG
ACGTGCTAGTGACAGTCCATAATCGCATGACCGACATGCCGGTTGACTTC
GTCTTCGAAGCCTTGGGGGCACCTTCCGGGAAACGGCAGAGTGCCAACAA
GGCGGCAGCGTCCCCCTCTTTCCTGTGGGTGGGGAATACTAGTCGGGGCA
TCAAGCGTATGGCGCCAGGGGCGAGCGTTCAGCTCCCACTTCGCGCCATA
TTTCTGCGTCCCGGCGTGTACGACCTGAACCGCTTCCGCTTCGTAGCGCA
CATGCCAGCCTCTTCTCCCCAGATCGTCGCGGGGGTGGTTGGTTCCCGTC
TGAAGCTCCTGCATGGCAACACAGTGCGCGTTCCCTACATTTTCTCCGCC
CAGTATCTGATAAAGGTCTCGGCTGCCCCGCCTCCTCCCTCCGATGTCCC
AGCTCCCCTAACCGCGGCCGGTGCCCCCACGGCCAGCCAGAGCTCGAGGG
TAAATACAGGCTTCCTGGTGCGTGGAGGCGAACGAGAATACGAGGGAGAG
CGACCAGGAATACGGGGGGAGGATGGTGGATTGGGCCGAGACGTTTCGTC
GATCCTCCATTCGCGGTCAGGCATCGCCTCCGTGGGCGGTGACGACGACC
CGAAGCGACCGGAGGCTCTGGTCACGCTGGTGGAGCAGGCCCGGGGAGGA
AGGAAGGTCGGGAGGGAGGGAGAAGAGCAACGAGAGCTGGTAGCCGATGC
GGCACCGCCTCCATTGCTCCCAGGCCCGGGGGCCGAAGAGGCCATGGAGG
ACGTGGACAGCTTGAACACGCCCTTGGACCGCTCTCTGGCGGGCGGGCGG
GAGGAGGGGGAGGCGGTGGAGCGGGAGACAAGGGGGGGGACGTCGAACGC
CGGGTTCTCTCCGTCGGTTCCTGTCCGCCTGGTAGCGAGTCCTTCCTGGG
AAGGGACCGGGCCAGGGGGGCTGGGGGAGGGGGCGGAAGCGGGAGAGGAG
GGGGAGGTGGAGGTGGCCGAAGATCAAACGTTCAGTGCGGAGGGGCAGGA
GCGAGCGCGTCAGAAACTAGAGCTTGAGGAAGCCGGGGAGGTGGGAGAGG
AGGAGGTCAAAGAAGGGGGTGGGGATGGGTTGGAGGCGGCAGCGGGCGGA
CCTTAGGAAGGAGGAAAGAGAGGTGACGCACACGGCTACGGGAACATCCC
AAGGAGCGTCGGTGGACACACAATAAGTAAGAGCAAAGCATAACAAAAAG
CAAATGAATAGTGCTACGCCTGGACTTGAAATCCTTCGCAAGGGATTTTT
CGATTTATACAGTATTTACGGCGGAACCAACCCT back to topprotein sequence of rna4047 >rna4047-protein ID=rna4047-protein|Name=rna4047|organism=Nannochloropsis gaditana|type=polypeptide|length=357bp
MDTSTAVSEGIAPLLNPFLLTYTMVMSLMLLSLLRYANNRPAAAFQAAPI
LLKRLGLPISSFSSSLFSASSVSTVPRSLPSFANETLTPAGTRMPACVHR
ILTRAEAKERVLVVGDVHGCLEELQALLVKANYTAARDSVVLVGDLVNKG
PLSAETVKWCRTQGFYSVRGNHDDSALAAYFRVGKFAGVSSLPQAYDFVA
ALDEADVAWLDSLPYTLSIEHLGVVVVHAGLLPGRPLQMQQAADMSRMRS
VKRAGEGGEGTWVGVEYIPENGEAEPWAKVWSQEGKECEGGEGSTDARHL
LFGHDAKRGLQVFRKATGLDTGCCYGRELTLAILPGEERISVKALKAYQV
PHGLKSE back to topmRNA from alignment at CM002462.1:705130..706513- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4047 ID=rna4047|Name=rna4047|organism=Nannochloropsis gaditana|type=mRNA|length=1384bp|location=Sequence derived from alignment at CM002462.1:705130..706513- (Nannochloropsis gaditana)
ATGGACACGAGCACGGCCGTAAGCGAAGGAATAGCCCCGCTACTGAATCC
CTTCCTCCTCACGTACACCATGGTTATGAGTCTGATGCTATTGAGCCTCC
TGCGCGTAAGTCTTCGATTTTTAGGGGCCCATGACTGAAAATACATAACC
AGAGCCGGCGTGCGTTCCCTTGCGAGTAGCTCTTGTCATGGCTTGTGCCC
TCGTTTTACGTCCCTCATGAGTCACCCGCCAAAGCCCACACTGCTTCCAC
TCTGCCCCTCTTCCTCGAATTTACGCGAGACGGAGTCGTCCTCAATCACG
CGACTTGATCTCTTTTTCTTAAACATTCCTACCGTGTTCCAGCCTGAGAG
CGATAAGACCCAGGTTGTCCTAAATCATGTGCTGAGTCTCCTTCCCCTTT
CCTTCTTTTTCACAGTACGCCAATAACCGCCCTGCCGCTGCCTTTCAAGC
GGCACCTATCCTTTTAAAGCGCTTAGGCCTTCCTATATCGTCTTTCTCGT
CCTCACTTTTCTCTGCGTCAAGTGTATCGACAGTCCCCCGTAGCCTCCCC
TCCTTCGCAAATGAGACCTTGACGCCGGCCGGGACACGAATGCCCGCTTG
CGTCCACCGCATCCTCACCCGTGCCGAGGCCAAGGAGCGCGTACTGGTGG
TTGGCGACGTTCACGGGTGTCTGGAAGAGCTGCAAGCCTTGTTGGTCAAG
GCGAACTACACGGCCGCCAGGGATTCTGTGGTCCTGGTGGGGGACCTCGT
CAATAAAGGGCCTCTGTCCGCCGAGACGGTCAAGTGGTGCCGCACACAAG
GCTTCTACAGCGTGCGGGGCAATCACGACGACAGCGCCCTGGCTGCGTAT
TTCCGCGTCGGCAAGTTCGCGGGTGTTTCGTCTCTGCCTCAAGCCTACGA
CTTTGTGGCGGCGCTGGACGAAGCCGACGTAGCATGGCTGGACAGCTTGC
CTTACACGCTCTCCATCGAGCACCTAGGCGTGGTCGTGGTGCACGCGGGC
TTGCTGCCAGGGCGACCGCTACAAATGCAGCAGGCGGCCGACATGAGTCG
CATGCGGAGTGTGAAGCGTGCGGGAGAGGGGGGGGAGGGGACCTGGGTGG
GGGTGGAGTACATCCCAGAGAACGGCGAGGCGGAGCCCTGGGCGAAGGTG
TGGTCACAGGAAGGGAAGGAGTGCGAGGGGGGGGAGGGCTCGACGGACGC
GCGGCATTTATTGTTCGGGCACGACGCCAAGAGGGGCCTGCAGGTGTTCC
GGAAGGCGACCGGACTGGACACAGGCTGTTGCTACGGTAGGGAGTTGACC
CTGGCCATTTTGCCGGGGGAGGAGCGCATCTCTGTGAAAGCGTTGAAGGC
CTACCAGGTCCCGCACGGGCTGAAAAGTGAATGA back to topCoding sequence (CDS) from alignment at CM002462.1:705130..706513- >rna4047 ID=rna4047|Name=rna4047|organism=Nannochloropsis gaditana|type=CDS|length=2148bp|location=Sequence derived from alignment at CM002462.1:705130..706513- (Nannochloropsis gaditana)
TACGCCAATAACCGCCCTGCCGCTGCCTTTCAAGCGGCACCTATCCTTTT
AAAGCGCTTAGGCCTTCCTATATCGTCTTTCTCGTCCTCACTTTTCTCTG
CGTCAAGTGTATCGACAGTCCCCCGTAGCCTCCCCTCCTTCGCAAATGAG
ACCTTGACGCCGGCCGGGACACGAATGCCCGCTTGCGTCCACCGCATCCT
CACCCGTGCCGAGGCCAAGGAGCGCGTACTGGTGGTTGGCGACGTTCACG
GGTGTCTGGAAGAGCTGCAAGCCTTGTTGGTCAAGGCGAACTACACGGCC
GCCAGGGATTCTGTGGTCCTGGTGGGGGACCTCGTCAATAAAGGGCCTCT
GTCCGCCGAGACGGTCAAGTGGTGCCGCACACAAGGCTTCTACAGCGTGC
GGGGCAATCACGACGACAGCGCCCTGGCTGCGTATTTCCGCGTCGGCAAG
TTCGCGGGTGTTTCGTCTCTGCCTCAAGCCTACGACTTTGTGGCGGCGCT
GGACGAAGCCGACGTAGCATGGCTGGACAGCTTGCCTTACACGCTCTCCA
TCGAGCACCTAGGCGTGGTCGTGGTGCACGCGGGCTTGCTGCCAGGGCGA
CCGCTACAAATGCAGCAGGCGGCCGACATGAGTCGCATGCGGAGTGTGAA
GCGTGCGGGAGAGGGGGGGGAGGGGACCTGGGTGGGGGTGGAGTACATCC
CAGAGAACGGCGAGGCGGAGCCCTGGGCGAAGGTGTGGTCACAGGAAGGG
AAGGAGTGCGAGGGGGGGGAGGGCTCGACGGACGCGCGGCATTTATTGTT
CGGGCACGACGCCAAGAGGGGCCTGCAGGTGTTCCGGAAGGCGACCGGAC
TGGACACAGGCTGTTGCTACGGTAGGGAGTTGACCCTGGCCATTTTGCCG
GGGGAGGAGCGCATCTCTGTGAAAGCGTTGAAGGCCTACCAGGTCCCGCA
CGGGCTGAAAAGTGAATGAATGGACACGAGCACGGCCGTAAGCGAAGGAA
TAGCCCCGCTACTGAATCCCTTCCTCCTCACGTACACCATGGTTATGAGT
CTGATGCTATTGAGCCTCCTGCGCTACGCCAATAACCGCCCTGCCGCTGC
CTTTCAAGCGGCACCTATCCTTTTAAAGCGCTTAGGCCTTCCTATATCGT
CTTTCTCGTCCTCACTTTTCTCTGCGTCAAGTGTATCGACAGTCCCCCGT
AGCCTCCCCTCCTTCGCAAATGAGACCTTGACGCCGGCCGGGACACGAAT
GCCCGCTTGCGTCCACCGCATCCTCACCCGTGCCGAGGCCAAGGAGCGCG
TACTGGTGGTTGGCGACGTTCACGGGTGTCTGGAAGAGCTGCAAGCCTTG
TTGGTCAAGGCGAACTACACGGCCGCCAGGGATTCTGTGGTCCTGGTGGG
GGACCTCGTCAATAAAGGGCCTCTGTCCGCCGAGACGGTCAAGTGGTGCC
GCACACAAGGCTTCTACAGCGTGCGGGGCAATCACGACGACAGCGCCCTG
GCTGCGTATTTCCGCGTCGGCAAGTTCGCGGGTGTTTCGTCTCTGCCTCA
AGCCTACGACTTTGTGGCGGCGCTGGACGAAGCCGACGTAGCATGGCTGG
ACAGCTTGCCTTACACGCTCTCCATCGAGCACCTAGGCGTGGTCGTGGTG
CACGCGGGCTTGCTGCCAGGGCGACCGCTACAAATGCAGCAGGCGGCCGA
CATGAGTCGCATGCGGAGTGTGAAGCGTGCGGGAGAGGGGGGGGAGGGGA
CCTGGGTGGGGGTGGAGTACATCCCAGAGAACGGCGAGGCGGAGCCCTGG
GCGAAGGTGTGGTCACAGGAAGGGAAGGAGTGCGAGGGGGGGGAGGGCTC
GACGGACGCGCGGCATTTATTGTTCGGGCACGACGCCAAGAGGGGCCTGC
AGGTGTTCCGGAAGGCGACCGGACTGGACACAGGCTGTTGCTACGGTAGG
GAGTTGACCCTGGCCATTTTGCCGGGGGAGGAGCGCATCTCTGTGAAAGC
GTTGAAGGCCTACCAGGTCCCGCACGGGCTGAAAAGTGAATGAATGGACA
CGAGCACGGCCGTAAGCGAAGGAATAGCCCCGCTACTGAATCCCTTCCTC
CTCACGTACACCATGGTTATGAGTCTGATGCTATTGAGCCTCCTGCGC back to top
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