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Properties
Property Name | Value |
Product | pci domain-containing protein 2 |
Orig transcript id | gnl|cribi|Naga_100001g73.8099.mrna |
Orig protein id | gnl|cribi|Naga_100001g73.8099 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002462.1 | supercontig | CM002462.1:684967..687962 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4041 ID=rna4041|Name=rna4041|organism=Nannochloropsis gaditana|type=mRNA|length=1715bp ACAGGGAGGCCTGTTCGCTATCTCTCGTGGCCGGTCTGACCTAACTCGTC ATGCCTACCTCCTCGCCCTGCGTACTCGCGTCCCTTTTTATCGTGTTATT GCTTCTTTACCCGCCCTCAGGCTGCGTCTGTTTCCGCTTGGGGAAGCGTG AAAACGATGTTGCCTCTATCAACAGCGATGGGGCCTCAACTGCGCCAGCG CAGGTTCAGCAGTGGAAGGTCCCGCGATTGAGTAAAGTAGTTGCTGAGGC GATGGGGCACGGTGGCGACAGTGCAACGAGTGTGGAGTGCCATACCGCGG ATAAACTAATGCAAGAACGAGGGCCTGACAACTATAGGAAGGCTGCTGCC GAGTATAAACTTCTTTTGGAGAAGCAACCCAACAGCGCGTCTCTCAAGTT CAAATTCGCCGACGCCAGCGTCTCATTGCTCCGCTCATTGACGAATGCCA ACGCGGTCCTCATTGACGGCGTCTCCGACAGCAAAGAGAACCGGAAGCTG TGGAAGACCTATGCATTTGAGGCTTATGACATTTTAAAAGAATTGCACGC GCAAGAGCCTCAAAACGCGCGAATACACGTCCTCATGACCGAGGCCTACA CTTACAGGACGTCCAGCAAGGGCATCCTAAAGGCGGCCGTGACGGGCGAT GGCCTCACCTTCATGCGCCTCGTCGACCAGATTGTCTCCCGCCACCCAAC TTACGACGCAGGTGTGCCCTTCATTTTTCGAGGGGCTTTCCTTCTGGCCG CGCCCTGGCCCCTGCGGGACGTGCCGAAGGCGGTGGAGGCCTTTGAGAGC GCCTGGGAGGTGGAGCCTCGGTCCTTGCGCAACAACTTCTTTCTCGGGGT CAGCCACTTCCATGCAGGATCATTCGAGGCAGCCAGACAGGCCTTCGAAC GGGCCGTGGGGAAGGATGTGGAATCGGTGGCCGCGACTGAGGTGGACGTG GCCGAGTTTTTCCGGCGGGAGTCCCGACGGTCCTTGGAGATGACGAAAGA GAGGATCGACGGGGGTATGGCGTAGGGGCTGCAAGGGTGATTGGGGAGTG TATAGGTGGGTAGGGCTAGGAAGGCAGGTATCGGCGACTTTTTGGTTTCC AAACTTGGTGGGAGGTATGACGGCAAACTCGGTACACAGTAGCTTGGAGG GGGGGATTATTGTGCACTATGTCAAGACAGCTCAAGTTCTGCCTTGGGGC TTTGCGCGTTATTAATACGAAAGGGGGGTGTGGACTTAGAAGACCTGAAA AATTATCGGTGCGCTTTGGGAGGAAAGTCGAATGTGAGGATATCGCTGGA CTCCAGGCTTTGAGGCCAAGCAACCGAGAACCTTTAAGCAAGGAAAGACA ACGGAAAGGAGCCATTGCCTCGAAGTGCTCGCTCGCATGCCGCCCCAGGC CATCCACCGCTCAGAATGTTTTACTTTACATGGGCCGTCCACCTGCCCGA GCGGGTGAACAACACGTCAGCTCTGCGGCGAGGGGAAGGGCTTATCCTTG GAGAGGACAAGAATGCGTTTCTCGTGCGCGATGTACCCGCGGATGCTTCC CTTGTAGATCAGGTTCGCCAGCAAACACTCGATCTCGTCGATGTCCACGT CCGAGGCCGGGTCCAAACCCTGGTGCAGGCGCATGATGAGCTCGATGGAC AGGCGCGACTCCTTTCCCTTGAGCACCCAGCTATGGCATGGTCGGGAAGA CGGTGGGGAAATATG back to topprotein sequence of rna4041 >rna4041-protein ID=rna4041-protein|Name=rna4041|organism=Nannochloropsis gaditana|type=polypeptide|length=438bp MKKKEVINILILIVALGHLFGIHCGIIHNTTLQPAFQMLFRKVTAYLDAV TEASRQEDGTALTHLFSYDCLSHGLGHQFARMDVRQAIRNNAAVKRVAHV PELLEPFLRAAGCLADQEVEKAFEHHRSAFVLAGDLYKDLQEEWLLNLMR KLARGLRLLAQKVDKEKVRFDPIMNEAVKAISDKFRLFGTVTASGRRRVA LMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDDDFTSGEFAQADAVT YHFLRARLFLLDTNYIEAERFLTYAFRHCPAAAHRNKRTILSYMVPVKLN LGLLPRRGLLERFQLKEFEALVAALRDGDFRLYQEQLDKYQDDFIARGVY IILEKLKLFVYRNFFKKIWVLKGKESRLSIELIMRLHQGLDPASDVDIDE IECLLANLIYKGSIRGYIAHEKRILVLSKDKPFPSPQS back to topmRNA from alignment at CM002462.1:684967..687962- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4041 ID=rna4041|Name=rna4041|organism=Nannochloropsis gaditana|type=mRNA|length=2996bp|location=Sequence derived from alignment at CM002462.1:684967..687962- (Nannochloropsis gaditana) ATGAAGAAAAAAGAGGTGATAAATATCTTGATACTTATTGTGGCCTTAGG
ACACTTATTCGGGATCCACTGTGAAGATAAAAAGACTGTGGGAACCGAGT
TGAAGCACTTCCGGGGTGTTCTCCGAAACGCTGCTTCGCTCAAGCCCTCC
CGCAGTACCTGATACGTAATACTGTACAGAGGTCCAAAACTCGGTAATAG
GGCCACAGAACCGGGCTCAGTCCATGCGCAGACATGAATAATTTGTATCG
GAGCCACTCATCCTCACATTGCATCGTCTTGTCCTTCGTACAGGCGGTAT
CATTCATAATACTACGTTGCAGCCGGCCTTCCAAATGCTTTTTCGCAAGG
TCACGGCGTACCTAGATGCAGTGACGGAGGCTTCCAGGCAGGAAGATGGC
ACCGCCTTGACGCACCTTTTCTCCTACGATTGCCTATCGCATGGTTTAGG
GCATCAATTTGCTCGTATGGATGTCCGTCAGGCCATTCGTAACAACGCTG
CAGTAAAGCGTGTCGCGCATGTTCCTGAGCTCCTGGAGCCCTTCTTGCGC
GCTGCCGGATGTTTGGCGGATCAAGAGGTGGAGAAAGCCTTCGAGCACCA
TCGATCAGCTTTCGTTCTGGCGGGTGATTTATACAAAGACCTCCAGGAAG
AGTGGCTCCTCAATCTAATGCGCAAGCTCGCGCGCGGCCTACGCCTCTTG
GCGCAGAAAGTGGACAAGGAGAAGGTGCGATTCGATCCCATCATGAACGA
GGCCGTCAAAGCCATCTCGGATAAGTTTCGGCTCTTCGGCACGGTCACAG
CCAGTGGGCGTCGACGGGTGGCTCTGATGCTTGCGAACGAACAAATAATA
TGCTACCTGCAGCTGAACAATCCTCGGCAGTGCAAACCTTTGACGGACTG
GGCGGACGCCCGGCACAAGCTCACGGACGATGACTTCACGTCCGGCGAGT
TTGCTCAAGCGGATGCTGTCACATACCATTTCCTTCGGGCGCGCCTTTTT
TTGCTCGACACGAATTACATAGAAGCCGAGCGCTTCCTGACCTATGCGTT
CCGACACTGCCCCGCTGCCGCTCACCGCAACAAGCGCACCATCCTCTCCT
ACATGGTGCCGGTGAAGCTCAACCTTGGTTTGCTGCCACGGGTAAGCCCA
GCATGTTCTAGCCTGTTCTAGCCACCCCGTCCTCTCGCACCGTGGCGTAG
TCTCTCATGTGCCCGCTTCCCCAACCCCACCCAGCGCGGCCTTCTCGAGC
GCTTTCAGCTCAAAGAGTTTGAGGCGCTGGTGGCTGCTTTGCGCGATGGG
GATTTCCGTCTGTATCAAGAGCAGCTTGACAAATATCAGGATGACTTTAT
TGCCCGCGGGGTTTATATCATATTGGAGAAGCTCAAGCTTTTCGTATACC
GGAATTTCTTCAAAAAAATGTGAGTCTTGCCCGCCCGTTCCCAAGACCCA
CAGTGCAGCTACTCCGCGGGCTCTATTCATTTTTTACTCTCACTAATCTT
CAACTTTGTGCCTCATATTTCCCCACCGTCTTCCCGACCATGCCATAGCT
GGGTGCTCAAGGGAAAGGAGTCGCGCCTGTCCATCGAGCTCATCATGCGC
CTGCACCAGGGTTTGGACCCGGCCTCGGACGTGGACATCGACGAGATCGA
GTGTTTGCTGGCGAACCTGATCTACAAGGGAAGCATCCGCGGGTACATCG
CGCACGAGAAACGCATTCTTGTCCTCTCCAAGGATAAGCCCTTCCCCTCG
CCGCAGAGCTGACGTGTTGTTCACCCGCTCGGGCAGGTGGACGGCCCATG
TAAAGTAAAACATTCTGAGCGGTGGATGGCCTGGGGCGGCATGCGAGCGA
GCACTTCGAGGCAATGGCTCCTTTCCGTTGTCTTTCCTTGCTTAAAGGTT
CTCGGTTGCTTGGCCTCAAAGCCTGGAGTCCAGCGATATCCTCACATTCG
ACTTTCCTCCCAAAGCGCACCGATAATTTTTCAGGTCTTCTAAGTCCACA
CCCCCCTTTCGTATTAATAACGCGCAAAGCCCCAAGGCAGAACTTGAGCT
GTCTTGACATAGTGCACAATAATCCCCCCCTCCAAGCTACTGTGTACCGA
GTTTGCCGTCATACCTCCCACCAAGTTTGGAAACCAAAAAGTCGCCGATA
CCTGCCTTCCTAGCCCTACCCACCTATACACTCCCCAATCACCCTTGCAG
CCCCTACGCCATACCCCCGTCGATCCTCTCTTTCGTCATCTCCAAGGACC
GTCGGGACTCCCGCCGGAAAAACTCGGCCACGTCCACCTCAGTCGCGGCC
ACCGATTCCACATCCTTCCCCACGGCCCGTTCGAAGGCCTGTCTGGCTGC
CTCGAATGATCCTGCATGGAAGTGGCTGACCCCGAGAAAGAAGTTGTTGC
GCAAGGACCGAGGCTCCACCTCCCAGGCGCTCTCAAAGGCCTCCACCGCC
TTCGGCACGTCCCGCAGGGGCCAGGGCGCGGCCAGAAGGAAAGCCCCTCG
AAAAATGAAGGGCACACCTGCGTCGTAAGTTGGGTGGCGGGAGACAATCT
GGTCGACGAGGCGCATGAAGGTGAGGCCATCGCCCGTCACGGCCGCCTTT
AGGATGCCCTTGCTGGACGTCCTGTAAGTGTAGGCCTCGGTCATGAGGAC
GTGTATTCGCGCGTTTTGAGGCTCTTGCGCGTGCAATTCTTTTAAAATGT
CATAAGCCTCAAATGCATAGGTCTTCCACAGCTTCCGGTTCTCTTTGCTG
TCGGAGACGCCGTCAATGAGGACCGCGTTGGCATTCGTCAATGAGCGGAG
CAATGAGACGCTGGCGTCGGCGAATTTGAACTTGAGAGACGCGCTTATCG
TGGTGAGGGTCCCGATTCAAAGGAAAAAAATGGTACGTTAGATTAGGTAT
AGCATTCGAAAAGACGCATTAGTGCAGGGGTGTTAGATTCTCATGTCGTG
CAACAAAGCTTGAAGAGGGCCCAAGCCCTCGAGCCGCACAACTTCT back to topCoding sequence (CDS) from alignment at CM002462.1:684967..687962- >rna4041 ID=rna4041|Name=rna4041|organism=Nannochloropsis gaditana|type=CDS|length=5268bp|location=Sequence derived from alignment at CM002462.1:684967..687962- (Nannochloropsis gaditana) CTGGGTGCTCAAGGGAAAGGAGTCGCGCCTGTCCATCGAGCTCATCATGC GCCTGCACCAGGGTTTGGACCCGGCCTCGGACGTGGACATCGACGAGATC GAGTGTTTGCTGGCGAACCTGATCTACAAGGGAAGCATCCGCGGGTACAT CGCGCACGAGAAACGCATTCTTGTCCTCTCCAAGGATAAGCCCTTCCCCT CGCCGCAGAGCTGACGCGGCCTTCTCGAGCGCTTTCAGCTCAAAGAGTTT GAGGCGCTGGTGGCTGCTTTGCGCGATGGGGATTTCCGTCTGTATCAAGA GCAGCTTGACAAATATCAGGATGACTTTATTGCCCGCGGGGTTTATATCA TATTGGAGAAGCTCAAGCTTTTCGTATACCGGAATTTCTTCAAAAAAATG CGGTATCATTCATAATACTACGTTGCAGCCGGCCTTCCAAATGCTTTTTC GCAAGGTCACGGCGTACCTAGATGCAGTGACGGAGGCTTCCAGGCAGGAA GATGGCACCGCCTTGACGCACCTTTTCTCCTACGATTGCCTATCGCATGG TTTAGGGCATCAATTTGCTCGTATGGATGTCCGTCAGGCCATTCGTAACA ACGCTGCAGTAAAGCGTGTCGCGCATGTTCCTGAGCTCCTGGAGCCCTTC TTGCGCGCTGCCGGATGTTTGGCGGATCAAGAGGTGGAGAAAGCCTTCGA GCACCATCGATCAGCTTTCGTTCTGGCGGGTGATTTATACAAAGACCTCC AGGAAGAGTGGCTCCTCAATCTAATGCGCAAGCTCGCGCGCGGCCTACGC CTCTTGGCGCAGAAAGTGGACAAGGAGAAGGTGCGATTCGATCCCATCAT GAACGAGGCCGTCAAAGCCATCTCGGATAAGTTTCGGCTCTTCGGCACGG TCACAGCCAGTGGGCGTCGACGGGTGGCTCTGATGCTTGCGAACGAACAA ATAATATGCTACCTGCAGCTGAACAATCCTCGGCAGTGCAAACCTTTGAC GGACTGGGCGGACGCCCGGCACAAGCTCACGGACGATGACTTCACGTCCG GCGAGTTTGCTCAAGCGGATGCTGTCACATACCATTTCCTTCGGGCGCGC CTTTTTTTGCTCGACACGAATTACATAGAAGCCGAGCGCTTCCTGACCTA TGCGTTCCGACACTGCCCCGCTGCCGCTCACCGCAACAAGCGCACCATCC TCTCCTACATGGTGCCGGTGAAGCTCAACCTTGGTTTGCTGCCACGGATG AAGAAAAAAGAGGTGATAAATATCTTGATACTTATTGTGGCCTTAGGACA CTTATTCGGGATCCACTCTGGGTGCTCAAGGGAAAGGAGTCGCGCCTGTC CATCGAGCTCATCATGCGCCTGCACCAGGGTTTGGACCCGGCCTCGGACG TGGACATCGACGAGATCGAGTGTTTGCTGGCGAACCTGATCTACAAGGGA AGCATCCGCGGGTACATCGCGCACGAGAAACGCATTCTTGTCCTCTCCAA GGATAAGCCCTTCCCCTCGCCGCAGAGCTGACGCGGCCTTCTCGAGCGCT TTCAGCTCAAAGAGTTTGAGGCGCTGGTGGCTGCTTTGCGCGATGGGGAT TTCCGTCTGTATCAAGAGCAGCTTGACAAATATCAGGATGACTTTATTGC CCGCGGGGTTTATATCATATTGGAGAAGCTCAAGCTTTTCGTATACCGGA ATTTCTTCAAAAAAATGCGGTATCATTCATAATACTACGTTGCAGCCGGC CTTCCAAATGCTTTTTCGCAAGGTCACGGCGTACCTAGATGCAGTGACGG AGGCTTCCAGGCAGGAAGATGGCACCGCCTTGACGCACCTTTTCTCCTAC GATTGCCTATCGCATGGTTTAGGGCATCAATTTGCTCGTATGGATGTCCG TCAGGCCATTCGTAACAACGCTGCAGTAAAGCGTGTCGCGCATGTTCCTG AGCTCCTGGAGCCCTTCTTGCGCGCTGCCGGATGTTTGGCGGATCAAGAG GTGGAGAAAGCCTTCGAGCACCATCGATCAGCTTTCGTTCTGGCGGGTGA TTTATACAAAGACCTCCAGGAAGAGTGGCTCCTCAATCTAATGCGCAAGC TCGCGCGCGGCCTACGCCTCTTGGCGCAGAAAGTGGACAAGGAGAAGGTG CGATTCGATCCCATCATGAACGAGGCCGTCAAAGCCATCTCGGATAAGTT TCGGCTCTTCGGCACGGTCACAGCCAGTGGGCGTCGACGGGTGGCTCTGA TGCTTGCGAACGAACAAATAATATGCTACCTGCAGCTGAACAATCCTCGG CAGTGCAAACCTTTGACGGACTGGGCGGACGCCCGGCACAAGCTCACGGA CGATGACTTCACGTCCGGCGAGTTTGCTCAAGCGGATGCTGTCACATACC ATTTCCTTCGGGCGCGCCTTTTTTTGCTCGACACGAATTACATAGAAGCC GAGCGCTTCCTGACCTATGCGTTCCGACACTGCCCCGCTGCCGCTCACCG CAACAAGCGCACCATCCTCTCCTACATGGTGCCGGTGAAGCTCAACCTTG GTTTGCTGCCACGGATGAAGAAAAAAGAGGTGATAAATATCTTGATACTT ATTGTGGCCTTAGGACACTTATTCGGGATCCACTCTGGGTGCTCAAGGGA AAGGAGTCGCGCCTGTCCATCGAGCTCATCATGCGCCTGCACCAGGGTTT GGACCCGGCCTCGGACGTGGACATCGACGAGATCGAGTGTTTGCTGGCGA ACCTGATCTACAAGGGAAGCATCCGCGGGTACATCGCGCACGAGAAACGC ATTCTTGTCCTCTCCAAGGATAAGCCCTTCCCCTCGCCGCAGAGCTGACG CGGCCTTCTCGAGCGCTTTCAGCTCAAAGAGTTTGAGGCGCTGGTGGCTG CTTTGCGCGATGGGGATTTCCGTCTGTATCAAGAGCAGCTTGACAAATAT CAGGATGACTTTATTGCCCGCGGGGTTTATATCATATTGGAGAAGCTCAA GCTTTTCGTATACCGGAATTTCTTCAAAAAAATGCGGTATCATTCATAAT ACTACGTTGCAGCCGGCCTTCCAAATGCTTTTTCGCAAGGTCACGGCGTA CCTAGATGCAGTGACGGAGGCTTCCAGGCAGGAAGATGGCACCGCCTTGA CGCACCTTTTCTCCTACGATTGCCTATCGCATGGTTTAGGGCATCAATTT GCTCGTATGGATGTCCGTCAGGCCATTCGTAACAACGCTGCAGTAAAGCG TGTCGCGCATGTTCCTGAGCTCCTGGAGCCCTTCTTGCGCGCTGCCGGAT GTTTGGCGGATCAAGAGGTGGAGAAAGCCTTCGAGCACCATCGATCAGCT TTCGTTCTGGCGGGTGATTTATACAAAGACCTCCAGGAAGAGTGGCTCCT CAATCTAATGCGCAAGCTCGCGCGCGGCCTACGCCTCTTGGCGCAGAAAG TGGACAAGGAGAAGGTGCGATTCGATCCCATCATGAACGAGGCCGTCAAA GCCATCTCGGATAAGTTTCGGCTCTTCGGCACGGTCACAGCCAGTGGGCG TCGACGGGTGGCTCTGATGCTTGCGAACGAACAAATAATATGCTACCTGC AGCTGAACAATCCTCGGCAGTGCAAACCTTTGACGGACTGGGCGGACGCC CGGCACAAGCTCACGGACGATGACTTCACGTCCGGCGAGTTTGCTCAAGC GGATGCTGTCACATACCATTTCCTTCGGGCGCGCCTTTTTTTGCTCGACA CGAATTACATAGAAGCCGAGCGCTTCCTGACCTATGCGTTCCGACACTGC CCCGCTGCCGCTCACCGCAACAAGCGCACCATCCTCTCCTACATGGTGCC GGTGAAGCTCAACCTTGGTTTGCTGCCACGGATGAAGAAAAAAGAGGTGA TAAATATCTTGATACTTATTGTGGCCTTAGGACACTTATTCGGGATCCAC TCTGGGTGCTCAAGGGAAAGGAGTCGCGCCTGTCCATCGAGCTCATCATG CGCCTGCACCAGGGTTTGGACCCGGCCTCGGACGTGGACATCGACGAGAT CGAGTGTTTGCTGGCGAACCTGATCTACAAGGGAAGCATCCGCGGGTACA TCGCGCACGAGAAACGCATTCTTGTCCTCTCCAAGGATAAGCCCTTCCCC TCGCCGCAGAGCTGACGCGGCCTTCTCGAGCGCTTTCAGCTCAAAGAGTT TGAGGCGCTGGTGGCTGCTTTGCGCGATGGGGATTTCCGTCTGTATCAAG AGCAGCTTGACAAATATCAGGATGACTTTATTGCCCGCGGGGTTTATATC ATATTGGAGAAGCTCAAGCTTTTCGTATACCGGAATTTCTTCAAAAAAAT GCGGTATCATTCATAATACTACGTTGCAGCCGGCCTTCCAAATGCTTTTT CGCAAGGTCACGGCGTACCTAGATGCAGTGACGGAGGCTTCCAGGCAGGA AGATGGCACCGCCTTGACGCACCTTTTCTCCTACGATTGCCTATCGCATG GTTTAGGGCATCAATTTGCTCGTATGGATGTCCGTCAGGCCATTCGTAAC AACGCTGCAGTAAAGCGTGTCGCGCATGTTCCTGAGCTCCTGGAGCCCTT CTTGCGCGCTGCCGGATGTTTGGCGGATCAAGAGGTGGAGAAAGCCTTCG AGCACCATCGATCAGCTTTCGTTCTGGCGGGTGATTTATACAAAGACCTC CAGGAAGAGTGGCTCCTCAATCTAATGCGCAAGCTCGCGCGCGGCCTACG CCTCTTGGCGCAGAAAGTGGACAAGGAGAAGGTGCGATTCGATCCCATCA TGAACGAGGCCGTCAAAGCCATCTCGGATAAGTTTCGGCTCTTCGGCACG GTCACAGCCAGTGGGCGTCGACGGGTGGCTCTGATGCTTGCGAACGAACA AATAATATGCTACCTGCAGCTGAACAATCCTCGGCAGTGCAAACCTTTGA CGGACTGGGCGGACGCCCGGCACAAGCTCACGGACGATGACTTCACGTCC GGCGAGTTTGCTCAAGCGGATGCTGTCACATACCATTTCCTTCGGGCGCG CCTTTTTTTGCTCGACACGAATTACATAGAAGCCGAGCGCTTCCTGACCT ATGCGTTCCGACACTGCCCCGCTGCCGCTCACCGCAACAAGCGCACCATC CTCTCCTACATGGTGCCGGTGAAGCTCAACCTTGGTTTGCTGCCACGGAT GAAGAAAAAAGAGGTGATAAATATCTTGATACTTATTGTGGCCTTAGGAC ACTTATTCGGGATCCACT back to top
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