rna4037, rna4037 (mRNA) Nannochloropsis gaditana

Overview
Namerna4037
Unique Namerna4037
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length3031
Alignment locationCM002462.1:681234..681549 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g79.8189.mrna
Orig protein idgnl|cribi|Naga_100001g79.8189
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:681234..681549 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100001g79gene3883Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4037rna4037-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26678.1cds4027Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4037 ID=rna4037|Name=rna4037|organism=Nannochloropsis gaditana|type=mRNA|length=3031bp
GTGGCCAGCCCCCCATTTGCAGAACGCGCACTCGCAAAGGTGCCATGTTA
GGTGCCACGCGGCATAATTTTCCGCACGCTACTTTCCTTTCATTTCTTGG
TGCACAGGCGAAACACGAAAATGAGGGGCAAGGCGCCAAATCAGCCGTCA
TCGTTACAGCGAGAAGCGTCAACCAGGAGAAAAAGAAAGCCAACTTCATT
TAGCCTCGCGCCCCAGCTGTCCAGGTCTGGCATCACAGTCTTGACCTTGC
TTTTGTGCGTTTGGGCATGTACGGCTTTTTTCTACGCACCCCTGCCGTTT
AGACGCTCTCCCATTGCAGCTTCCTCCTCGTCGTCACCTCCTCCGTCGTC
TGAGGCCTCCTCCGCGTTGGCCCGCTATGAAAAGGCACATGCTTTCGTCG
CCGCGGCCCGACCGCGCACACCGATCTTCTGGATGGCACCCTTGATCGCC
CGCGTGTGGAAGAATTACGCAAACTCCAAGCGGGCAGCCTCAAAAGACTG
TAGCTGCGGTGGACTCGGGGGTTGTGGATGCGCGGGTGGTGTCTCGAAGC
GTGGTGACCGCACTGTCCTGAGCATGGCGACAAGTGCACCCGCCAAACGA
ACACCCCGGGGGCAGACCACGGGCAGAGGAAGACGCGTCCCGCCTCGCCC
GGCCGCCGGCTCGAGGCCCGTGCATGTGGTGGCCGTCGTTCCCGGCCATG
GGGCCCGCGGGAAGCTGGAGGCCCCCTGGACGGAGGTGATGCAGCACATG
CATCGGCGCATGCAGTATGTAGACCCTGCCTTCGCTCTGCATGTGGTGAC
AGAGGAGGAGATTCTGGACCGGGGCGCGGCGGCCCTCGCGCATCTGCCCC
TGGGGCCTTCCTCTGGACTCCCACCCGCCCCCTTCCCTTCCTCTCCCTCC
TCTTCCCCTTCCACCGCCGCTGCGTCGGCCTCAGGTGTGCCCGACGCCAT
GTACTTCCTTGACGTCAAGAATCCGAAGGTGGCACACGAGCTGAAAGGCT
ACATGGCACAGGTCCCGCACCTGATCGCCCTTGACTCGTGTCCGGAGCTC
GCGCAAAAAAGTCGCATCGGCCCTGCTCGACCCTACGGACCTCTGGCTGG
TTTTTGGAAAGCGTTCCCCGTACCCACGGAGCGGAAGCGCCTGTTGGAGC
TCTTCGAGACGGTGCGCGGCTTTTGGAAGCGGGGCCACTCGGACGACGTG
CTCTACAGCGTCCTGGTCGTCATCAACGCCGTGCTTGTGGACATCCCCGC
GGTCTCAGAGATTCTCAAGCCCGTGACGCTCCAGGCCCTTCGTTGCATGC
TGGGCAACTGCGGGGCGCAAATCATCGACTGCCAGCGCAATCCCGCGTGC
AAGGCCGCCCTCTCCTGCCTGGAGCAGTGTGCCCCCAACGACCAGGTCTG
CCGGTACCGGTGCATCGTCCAGTATGAGTCGCGGGAGTTCGAGCAATTTG
CCCTCTGCATCCTCCAGAAGCACAATTGCCTGCAGAACCACGCCGCCATC
CCCATGTCCCCGGACCCCGCCCCGCTCTCTCACTTTCGAGGGGAACCCCT
TAGCCACGAGGCGGCCGAGGAGATCCAGTTCGGGCACTTGGGCCAGCTCC
AGCAAGGCTGCCCCTGGAGTTGGAAGGTGATCGCCGGCGTCAACCCCGCC
TACGACTTTTTCCCCTCCCAGCACATGACCTACTACCGGAAGGGGCAGGC
CTTGTGGTACCAGCCAGTCTTCCGCGTCATCACCTTCGACGGCAGGGAAG
TGTGGCGACGCCGGCTCTACCGCGTGCGTCGTGGGAAAGTTCCTGGGACC
TTCTATTACTCGGTCTTGGACAACGGCGTGACCAGCTCCGAGTTCTGGCG
CATTTTGGATGCGGCCGATGATCTGTCCTGGGTCTTGTTCTACTACAGTG
GGGCGGCGGCGGCAGCGGGTCAGTCGTACACGGGTGCGATTTTGGCCTCG
CCCACAGGCGAGTGGCCGTCCGCGGAGCCATGCAAAGCCAGGATTCTGGC
GGCTTTGGACCGGGCGGGCATCAAGGAATGGGAGCTCTTCAACGTGCATC
ACGACGGGTCGGACGGAGCCCCCTTAGAGATCGATCCCATGGCGGAGGCT
CGCTTCATGTACCCTGGATGGGCGGGCGCGAGAACCAGTCAGGCCGATGA
CGAGGGGCGTGTCACACTGGCTCCGGCCGCTGTACTGTAATATATCGAAT
GTGTAAAACCAGGAAAGGGAATGGGGAAGGAGAAGGGCCTCGAGTTGACG
CGGGTAGGTCTTGTCGCACACATGCCTTCAAGCACGGACGATTCGCGTGG
GCATGAGTTGCGCTTGCATCCTGGTGTAGATGGAGGAGAGAAGCGCCCAC
ATCCGAGTCATGTATTTGATTAGGAATTGTTGGGTTCGTGAATGTATGCG
AGGTACCCGGTGCACGCGCAGAATGTTATTTTAGTGTTTAGAGCAGAACC
TGCTGGGGAGGTGCAATGTATGAAACATGGAAGAGGAAAAGAAAATTAGA
AAGATAACCCTCAGCAGTCTCAGCAGTACTTTAACGACTCAGAAATGCGC
GAGGCCAAAAAGGAAAGGAGAGAGTAATATCCATGACGCGGACAGCCACG
GGGTGTTCGAGACTGCGGGGTCCGTCCTCTCTCATTGGTATTTTTTTCGT
TTTCATGTGTGTGATGTCTCGTCTTCGTCTGCCCTTACGTGTAAAAAAAA
ACTTCCTTTCACAACACTCAGAGACTCTCTCGGACCCGGTTCCACACACA
CTTTCACAGCCCTGGAAGCCCCTTCCCGATTCTTCGTCCTCCACCTCTTC
CCCAGCCTTATATTTTTGCGAGCAAATTTATAAAATAAGCACGACTGCGG
CCAAAGCGATTCTTGCTTCACCTTGCAGGAAATGTACTACCGTCCGCTCC
ACGCTATTTTCGGCTGACCCACTATATAAACAACGGCCCTTGCTTTTGCT
TCCCCTTCTCCATTCCATATCGTGCTAATCTGTAATATTACTTCACCCTT
CTTTAGATTAAAATGAAATCGACGTGTGCCC
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protein sequence of rna4037

>rna4037-protein ID=rna4037-protein|Name=rna4037|organism=Nannochloropsis gaditana|type=polypeptide|length=88bp
MEWRRGSKSKGRCLYSGSAENSVERTVVHFLQGEARIALAARWRTKNREG
ASRAVKVCVEPGPRESLSVVKGSFFLHVRADEDETSHT
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mRNA from alignment at CM002462.1:681234..681549-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4037 ID=rna4037|Name=rna4037|organism=Nannochloropsis gaditana|type=mRNA|length=316bp|location=Sequence derived from alignment at CM002462.1:681234..681549- (Nannochloropsis gaditana)
ATGGAATGGAGAAGGGGAAGCAAAAGCAAGGGCCGTTGTTTATATAGTGG
GTCAGCCGAAAATAGCGTGGAGCGGACGGTAGTACATTTCCTGCAAGGTG
AAGCAAGAATCGCTTTGGCCGCAGTCGTGCTTATTTTATAAATTTGCTCG
CAAAAATATAAGGCTGGGGAAGAGGTGGAGGACGAAGAATCGGGAAGGGG
CTTCCAGGGCTGTGAAAGTGTGTGTGGAACCGGGTCCGAGAGAGTCTCTG
AGTGTTGTGAAAGGAAGTTTTTTTTTACACGTAAGGGCAGACGAAGACGA
GACATCACACACATGA
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Coding sequence (CDS) from alignment at CM002462.1:681234..681549-

>rna4037 ID=rna4037|Name=rna4037|organism=Nannochloropsis gaditana|type=CDS|length=534bp|location=Sequence derived from alignment at CM002462.1:681234..681549- (Nannochloropsis gaditana)
AGGTGGAGGACGAAGAATCGGGAAGGGGCTTCCAGGGCTGTGAAAGTGTG
TGTGGAACCGGGTCCGAGAGAGTCTCTGAGTGTTGTGAAAGGAAGTTTTT
TTTTACACGTAAGGGCAGACGAAGACGAGACATCACACACATGAATGGAA
TGGAGAAGGGGAAGCAAAAGCAAGGGCCGTTGTTTATATAGTGGGTCAGC
CGAAAATAGCGTGGAGCGGACGGTAGTACATTTCCTGCAAGGTGAAGCAA
GAATCGCTTTGGCCGCAAGGTGGAGGACGAAGAATCGGGAAGGGGCTTCC
AGGGCTGTGAAAGTGTGTGTGGAACCGGGTCCGAGAGAGTCTCTGAGTGT
TGTGAAAGGAAGTTTTTTTTTACACGTAAGGGCAGACGAAGACGAGACAT
CACACACATGAATGGAATGGAGAAGGGGAAGCAAAAGCAAGGGCCGTTGT
TTATATAGTGGGTCAGCCGAAAATAGCGTGGAGCGGACGGTAGTACATTT
CCTGCAAGGTGAAGCAAGAATCGCTTTGGCCGCA
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Synonyms
Publications