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Properties
| Property Name | Value |
|---|
| Product | deoxyhypusine hydroxylase-like protein |
| Orig transcript id | gnl|cribi|Naga_100001g89.8288.mrna |
| Orig protein id | gnl|cribi|Naga_100001g89.8288 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:657746..659529 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4028 ID=rna4028|Name=rna4028|organism=Nannochloropsis gaditana|type=mRNA|length=903bp
ATGGAGGAACTAGACCAGGTGCTGGAGAGGGGCGACTCAGTCGCCATACT
CCGCTATTTACGGCACAATCGGATTCGTGCTTCAGCTGAAGTGGTTCAGC
ATGGACAGGACTTCGTTGCCAAAGGGAAAGGTTCAAGCCTAGGAATCGAA
GCATGGCCAGTTTACGAGCAAGTTTTTTTGGCAGCTTTAGACCTTGGAGA
AACGCTGTTGGCGGAGAGGGCACTCGGTTTATTGCGGAAGCAGTTTCCAG
ACAGCGCACGCGTCGGGCGCTTGGTAGGCATGCAAGCGGAGGCGGAAGGG
ACTTATGCAGTGGCGGCAGAGGTGTACAAGAGCTTGCGGGAGGCGCATCC
CACGGACCCGGTGGTTTGGAAGCGATGGGTGAGTTTGGCAAAGGCCCAGG
GAGATCTGCCGGAGGCCATCAAGCGATGCAACGAGTACTTGAAGGTCTTC
CAGAACGATTCGAGCGCGTGGCAGGAGCTCGCCGAGCTCTACTTGCTGAC
GGGTCATTTGGGCAAAGCCGCGTTTTGCTATGAGGAGCTGGTCCTCTCAG
GCCCATCGATTTTTTCCCACCATGTGGCGCTGGCTGAAGTTTACGCGGCC
ATGGGGGGGGCTGAGTCCCTGCGGTTGGCTCGGAAGCACTATGCTCAGTC
CATGGAATTGCACCAAGGAGACGACAATTTGCGATCTCTTTATGGAATGT
GTTCGACATGCCATGCATTGGCACGCTGTACCCATAAGAGCGCCCATGAA
GACAAATCAGACGCAGCAGTGAATGGCGCGCTCTTCAAGCTTGCCGTCGA
CAAGTTAAAGTCTCACTATAGACGGGTCAATCCGTCTATGCTTCCTCTGG
TAGAAGTTACTCTGCTGCAGCAGGCTATCGGTGATGCAAGTCTTCAAAAG
TAG back to topprotein sequence of rna4028 >rna4028-protein ID=rna4028-protein|Name=rna4028|organism=Nannochloropsis gaditana|type=polypeptide|length=338bp
MSSMQFCSCTMTFASTHLPPLHLDSGLVRMAPDVAVLRKCLLDVSQPIQK
RTHAAFVLRTDGESEAVSAIGEALRNKQDSALLRHELAYVLGQIGDRKAC
PNLIAVLSDENDDSMVRHEAAEALGAIGEVEAVPVLETFVRDSVPEVADT
CRLSLDLIRWRHQGGEDASLAQEKGQIGLDKSPYMSVDPAPADRVDVSTA
ELEARLLDTSLPLFARYRAMFSLRNRNTTEAVAALAQGLKDPSPLFRHEV
AYVFGQMQNPASVPALKAVLEDGTEHRMVRHEAAEALGAVGGADCEGVLA
RFVRDEEVVVRESCEVALGIAEYWGESVAREVVESSAS back to topmRNA from alignment at CM002462.1:657746..659529+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4028 ID=rna4028|Name=rna4028|organism=Nannochloropsis gaditana|type=mRNA|length=1784bp|location=Sequence derived from alignment at CM002462.1:657746..659529+ (Nannochloropsis gaditana)
TGAAGAAAGTGCGTGTTTGAGTACTTTTATAGTAGCCGCACGACTCCTTG
TCCAAGTGCTTACCTCCGCCAACAGCGTTTCTCCAAGGTCTAAAGCTGCC
AAAAAAACTTGCTCGTAAACTGGCCATGCTGTACCATGCAAGTTGAGAGT
ATGCTGGCCGACATCAGCTATGCGGTCGTCTTCCAAGAGCTATTACAAGG
ACCCAACATTACCTTCGATTCCTAGGCTTGAACCTTTCCCTTTGGCAACG
AAGTCCTGTCCATGCTGAACCACTTCAGCTGAAGCACGAATCTATGTTGT
GTTTGAAGGGCATCACTAAGACTTGCAGGATTGACTGGGCTAAGACTTGC
CTCGGAGATAAGGAACTCACCCGATTGTGCCGTAAATAGCGGAGTATGGC
GACTGAGTCGCCCCTCTCCAGCACCTGGTCTAGTTCCTCCATGTCGTGCT
GTGTTGGAGGCACGAGATGATTAGGCTGAGTCCTCGCGGCTGCATCTCTT
GCCTGCCGTTGTAGGCTTCTCTGAGACGACAGCGAGCGGCCGTGCTGCCC
GTGGAGTTGGCACCAGGTTATGGCCTGGATAAGACAAGGCGCAATGGCCT
AGCGCCTCTGGGTGCTTTTTGGTTCGTCCAGCTATCTCTATAGCTCTTAA
AGAATGCAATGCACCATGGTTACGCCTGGACTTGTCACATATGTCGTCGA
TGCAATTCTGTAGTTGTACTATGACCTTCGCCTCCACTCACTTACCTCCC
CTACATCTCGATTCAGGGCTCGTGCGTATGGCTCCAGACGTGGCTGTGTT
AAGGAAGTGCCTCCTGGACGTTAGTCAGCCTATTCAGAAGCGTACTCATG
CAGCATTCGTCCTGCGAACAGACGGAGAATCTGAAGCCGTGTCTGCGATC
GGAGAGGCTCTACGGAATAAACAAGACTCAGCCTTACTTCGCCATGAGCT
GGCATATGTCCTTGGTCAGATTGGTGACCGCAAGGCGTGTCCCAACCTGA
TTGCTGTTCTATCGGACGAAAATGATGACTCTATGGTCCGGCACGAGGCC
GCTGAGGCCTTGGGTGCTATTGGCGAGGTTGAGGCCGTGCCGGTCCTGGA
GACCTTCGTCCGGGACTCCGTGCCTGAAGTGGCCGACACATGTCGCCTTT
CCTTAGACTTAATCCGCTGGAGGcaccaaggaggggaggatgccaGCCTT
GCTCAAGAAAAGGGGCAGATCGGGCTGGACAAGAGCCCGTACATGTCCGT
GGACCCGGCCCCAGCGGACCGCGTGGATGTGAGCACCGCCGAGCTGGAAG
CTCGTCTTCTGGACActtccttgcctctcttcGCCCGGTACCGCGCCATG
TTCTCCCTCAGAAACCGGAACACGacggaggccgtggccgccctcgccca
gggGTTGAAGGACCCGagccccctcttccgccacgAGGTGGCCTACGTTT
TCGGACAGATGCAGAACCCGGCGTCGGTGCCCGCCCTGAAGGCCGtcttg
gaggacgggacggagcATCGGATGGTGCGACACGAGgccgcggaggccct
gggggcggtggggggtGCAGACTGCGAGGGCGTGCTGGCAAGGTTCgtgc
gggacgaggaggtggtcgTGCGCGAGAGCTGTGAGGTGGCCCTAGGGATC
GCTGAGTACTGGGGGGAGTCGGTGGCGCGAGAGGTAGTGGAAAGCTCGGC
GTCCTAGGTGGATTTGCCGATGACATACGTTTGGGATGAATCGCACAAAA
GCAACAAGAAAGAGTGCGGTAGCGTGGTTTCGTG back to topCoding sequence (CDS) from alignment at CM002462.1:657746..659529+ >rna4028 ID=rna4028|Name=rna4028|organism=Nannochloropsis gaditana|type=CDS|length=1017bp|location=Sequence derived from alignment at CM002462.1:657746..659529+ (Nannochloropsis gaditana)
ATGTCGTCGATGCAATTCTGTAGTTGTACTATGACCTTCGCCTCCACTCA
CTTACCTCCCCTACATCTCGATTCAGGGCTCGTGCGTATGGCTCCAGACG
TGGCTGTGTTAAGGAAGTGCCTCCTGGACGTTAGTCAGCCTATTCAGAAG
CGTACTCATGCAGCATTCGTCCTGCGAACAGACGGAGAATCTGAAGCCGT
GTCTGCGATCGGAGAGGCTCTACGGAATAAACAAGACTCAGCCTTACTTC
GCCATGAGCTGGCATATGTCCTTGGTCAGATTGGTGACCGCAAGGCGTGT
CCCAACCTGATTGCTGTTCTATCGGACGAAAATGATGACTCTATGGTCCG
GCACGAGGCCGCTGAGGCCTTGGGTGCTATTGGCGAGGTTGAGGCCGTGC
CGGTCCTGGAGACCTTCGTCCGGGACTCCGTGCCTGAAGTGGCCGACACA
TGTCGCCTTTCCTTAGACTTAATCCGCTGGAGGcaccaaggaggggagga
tgccaGCCTTGCTCAAGAAAAGGGGCAGATCGGGCTGGACAAGAGCCCGT
ACATGTCCGTGGACCCGGCCCCAGCGGACCGCGTGGATGTGAGCACCGCC
GAGCTGGAAGCTCGTCTTCTGGACActtccttgcctctcttcGCCCGGTA
CCGCGCCATGTTCTCCCTCAGAAACCGGAACACGacggaggccgtggccg
ccctcgcccagggGTTGAAGGACCCGagccccctcttccgccacgAGGTG
GCCTACGTTTTCGGACAGATGCAGAACCCGGCGTCGGTGCCCGCCCTGAA
GGCCGtcttggaggacgggacggagcATCGGATGGTGCGACACGAGgccg
cggaggccctgggggcggtggggggtGCAGACTGCGAGGGCGTGCTGGCA
AGGTTCgtgcgggacgaggaggtggtcgTGCGCGAGAGCTGTGAGGTGGC
CCTAGGGATCGCTGAGTACTGGGGGGAGTCGGTGGCGCGAGAGGTAGTGG
AAAGCTCGGCGTCCTAG back to top
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