rna4018, rna4018 (mRNA) Nannochloropsis gaditana

Overview
Namerna4018
Unique Namerna4018
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1314
Alignment locationCM002462.1:640390..640766 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g98.8153.mrna
Orig protein idgnl|cribi|Naga_100001g98.8153
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:640390..640766 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100001g98gene3866Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4018rna4018-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26642.1cds4008Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4018 ID=rna4018|Name=rna4018|organism=Nannochloropsis gaditana|type=mRNA|length=1314bp
ATGATGAGGACGACAAGAGCAATGACGCTGCGCGGATCACTCTGCCTGCT
AAGCGCTCTGGCCTTCACATGCATGGCCTTGCTGCCTACGACGGCTGCAT
TTCTGGCCCCAACTGCCCAAGTGTCTCGTCGACGAGCTTTAACTGGTTTA
AGACTAAACTTAGGAGCGAGAGGCACTTTCAGCGGCGAATTCGACAAAGG
AGGGCTTTTTGCCAGCAGCAGTGGCTTTCCGTCCATTGGTGACGGTTTTC
CTGGGATGGGATCCTCCGGGTCTACCTCCCCCACCGCAACCGCCGATGGG
TTCCCCAGCCTGGGCGAGATTTCTTCCTTGTCATCGCCACGTCGCGGGGT
GCTTATCCAAAACATGCCGGCAGACTCCAATTTTAAGATTCGCATCCTGG
ACCGGGAGCATAAGCTTGGGATTACGGGTATTGTTGAGACCATTGCCGTG
GTCAAAGACGCGCGTTTCGCGCTCTGTCGAGTCAAGGATCGCGCCGCCGC
CATTTTGGACGAGTTTGTCTTTCCTGTGGATGTGGACTCGCAGCCCATGG
CGGCTCTGATCCGCAAGGCAAACCGACAGCTTGCGAAGGAGGGCCTGGAA
CTCAAATGGACGGCACATACGCTGACAGTGCGAGGCTTGAAGAGGCCTGA
CACCGGGTACATGTCCCGGAAAGAGCCTTTCAACGTGCAGGCGCGACGTC
TGCATTCGTCTTGGGGGGCTCGAGATGGGAGAGTAGCGGTCGAAGAGGAT
GATGAGGGCGCGAACGCCCAGGAGGGAGGTTTGGCAGAAGCGGAGGCGAC
GGCCACTCTGGCGTCCGCGGAGGAGATGGCTGCAGGCATGGATAGACTGG
ATGCCGCCTTCTTTGCCGACGTGAAGGATGAAGACTACGCAGGAGACGCG
GCCGAAGGTCTTGACAAACGCACGCCCCTGCTGGAGCCCGAGATGCTTTG
TCAGTTTGAATGGCAGCGTTCGAAATACCGCGTCGTGGTCTACCGTGAGC
CGGTGCCTGTCCTTGCCCAGTGGATGGAGGATGGGACCTGGCGCCTTCTG
AAATCGGTGGAAGCCGAGCTGGTGGAGGACGCCATGGCCTACAAGGGCCT
GCAGAACGTAGACGTGGAGCTTGTAGGGTCCGAAATGGTGCGCGACACGA
TCCGGGAAAACCTAGAAGGACAACAGGATGTAAATGATTACGGACCTATA
TTTGAGACTATTTTTCGAAGGGTTTTTATGGAAAAGTGGAAGATGTTACT
TGTGCTGCGACCTGCGGGATCACTTTGGTATAATACGCTAACGACAAAAG
AAACATTGGCATAA
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protein sequence of rna4018

>rna4018-protein ID=rna4018-protein|Name=rna4018|organism=Nannochloropsis gaditana|type=polypeptide|length=70bp
MILANYNYCRAGPAPAQQRNARTSFCRRWALWCYLSLLTVVQALEALLLN
PVNSMWCVSVHRAAGGDDLP
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mRNA from alignment at CM002462.1:640390..640766-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4018 ID=rna4018|Name=rna4018|organism=Nannochloropsis gaditana|type=mRNA|length=377bp|location=Sequence derived from alignment at CM002462.1:640390..640766- (Nannochloropsis gaditana)
ATGATTTTGTCAAGAGGACAGGCTCCAAAAGAGGCGTGTGGCGTTGAGTT
CGGCCAGGCTGAAAAAAAGGATGGCGGCTTGAAGAACATCGACGCTGCCC
AAGGCCGAAATGACGCCATCGCAGAGCTAACTACAACTACTGTCGAGCAG
GCCCCGCGCCCGCGCAGCAACGTAACGCGCGAACTTCTTTCTGCAGAAGG
TGGGCTCTGTGGTGCTATTTGTCCTTACTCACCGTTGTCCAGGCCCTGGA
GGCGCTTCTCTTGAATCCTGTAAATTCCATGTGGTGCGTGTCTGTTCATC
GTGCTGCAGGCGGGGATGACCTGCCATGAGGATGGCCAAAGGAAAGAAAA
ATAACTCAAATAATGCCAACGACTTCA
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Coding sequence (CDS) from alignment at CM002462.1:640390..640766-

>rna4018 ID=rna4018|Name=rna4018|organism=Nannochloropsis gaditana|type=CDS|length=426bp|location=Sequence derived from alignment at CM002462.1:640390..640766- (Nannochloropsis gaditana)
AGCTAACTACAACTACTGTCGAGCAGGCCCCGCGCCCGCGCAGCAACGTA
ACGCGCGAACTTCTTTCTGCAGAAGGTGGGCTCTGTGGTGCTATTTGTCC
TTACTCACCGTTGTCCAGGCCCTGGAGGCGCTTCTCTTGAATCCTGTAAA
TTCCATGTGGTGCGTGTCTGTTCATCGTGCTGCAGGCGGGGATGACCTGC
CATGAATGATTTTAGCTAACTACAACTACTGTCGAGCAGGCCCCGCGCCC
GCGCAGCAACGTAACGCGCGAACTTCTTTCTGCAGAAGGTGGGCTCTGTG
GTGCTATTTGTCCTTACTCACCGTTGTCCAGGCCCTGGAGGCGCTTCTCT
TGAATCCTGTAAATTCCATGTGGTGCGTGTCTGTTCATCGTGCTGCAGGC
GGGGATGACCTGCCATGAATGATTTT
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Synonyms
Publications