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Properties
| Property Name | Value |
|---|
| Product | riboflavin transporter 2 |
| Orig transcript id | gnl|cribi|Naga_100001g102.8105.mrna |
| Orig protein id | gnl|cribi|Naga_100001g102.8105 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:629964..632228 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4014 ID=rna4014|Name=rna4014|organism=Nannochloropsis gaditana|type=mRNA|length=1493bp
TTTCACAGATGACAAGCTCGCAAGATGATCTCCTGACCGAGCAAGGCGAG
GATGATGAGGAACCTCCTAAGCTGGTTCTTTTGTCCTCTCAAGTCGTCTC
GCAGCCTTCTTCCCGGCCGGGGGAAGGCGATGCGGATCTCTCTGAAACCA
AAAGCGGCAGTTCCAATCCAATCCCAATTGACAAGATTGTCCCTGTGACC
ATAATCACTGGGTTTCTCGGTTCAGGGAAGACGACACTGCTGAATCATAT
ACTAACTCAGCCGCACGGAAAACGGATTGCTGTGATTGAGAATGAGTTTG
GTAAAGGCTTAGGTATTGAAAGTGCCATTGCCAAGGATGGGGCCGATGGA
AGCAGTTTGGAAGGTTTTTTTGAGCTTGCAAATGGATGCATCTGCTGCTC
TGTCAAAAACGATCTCCTAGCCACTTTAGAGGTCCTGGTGCAGCGCAAAT
CTCAATTTGATTACGTTATAATAGAGACAAGCGGTCTAGCAGATCCTGGT
CCCGTCGCAAGCTGTTTGTGGGTAGACGAGGAGTTGGAGAGCCAGCTGCG
TCTGGACGGCATCGTTACTGTTGTAGACGCCAAGTACATCTCCCGACACA
TCCATAGAGGGGGGCAGGAAGGCCAGACTTTTCAAGGGGATAGCCATTTA
GAGAGAGTGAAAAATAGAGGGGCTGAACGGGTGACCTCTGATGTCTCGAA
CATTTGTGAAAATCTACGTTGCCCCGTTGCGAGCGAGGAAGTCTATTACC
GAGAAGAGGCGTTTCGACAGATCTGTGTGGCGGACCGCATAGTGCTCAAT
AAAACCGACTTGGTGCCCGAAGAAGACACGATCTCCCTGGAGGACGAGTT
GCGGGGTCTAAATGGAATGGCACGCATCCAACGCACGGTATATTCTCATG
TGGACCTTGACTTCGTGCTCGGCCTGGAATGTTACAGCGGGAAGACGAAG
GAGGATCCGCTGCCATTTTTGTCTTGCGGTGAGAGAAACGGCGATGGAGA
GCGACACAGCCACGGTGGCGTGAAAGAGGTGACAACGCTGGCGATAGTGG
AGCCGGTGGAGGTGGACGGAGAGGCCGTGAAGCGCTGGTTGGCAGACTTG
CTGTGGCGCGACGACCCGTCAGACGGAAAGGAGGGGGAAAGAGAAGACGT
GGGGCGGGACGAGGGCATCCAAGATTCGATCCGTGAGTCGAGATGTCAGA
GGCAGCAGATCTATCGTATGAAAGGCACCCTGTCCGTGGCGGGCTCCGAC
ATGGTCCACATCCTGCAGGCAGTGCACGAGACCTTCGAGCTCGAGGCCAG
CCAGACGCCTGGGGGGGGGGGGGCAGCGAGAGGCTGCTCGGGAGGGAGGG
GCTGAATGTCGGCTGGTCATCATCGGCAAGGCGCTCGACGAGGCGTGTTT
GAGGGCAGGCTTCTTGGCTACGGTCAGTTCCTAGCATGCGGAGCTAAGCT
GAAGTTAAGGAAAATAAGCTTGTGCGTCCTATTTGTGGGTGAA back to topprotein sequence of rna4014 >rna4014-protein ID=rna4014-protein|Name=rna4014|organism=Nannochloropsis gaditana|type=polypeptide|length=492bp
MLQASPLKAPPPAPPWALQAAFTALGLSSFMLSNALWAEMPALVSALPEG
NKLGSYLLLSLQAANVVPVIAMLRGPEVVHLESIIWALLLGGVVASQLMS
FCWAATTPIPGAGGKSHALSLILLTFLAGCINNSSSLFLYPFVARWERRY
VSALATGEGLSGILVSLIGLTQNVGGARPRFSVRAYFQGVSALYVFSLLG
FLFLLQEERHKKARVALSMDRVVAEERETAWQGGAKKRVLLSVKDEDSDA
LVVPLSAPTLAPAPVLALIWPFLLAQFGISLWAYGVIPALTPISTSGYQH
AAHVLQYSSIVSMALDPLSRALTHRLRCYRLPLLVVLVNVLATVLCVAAA
ISPRPPFVDQPLGGLFVVFFNGAFTAAFAFTSTMVFFCIHRALGPRHGLP
LPVHARRAGGADEAPGLQEDACALMVGQRRGGGRPVSIGRGEGEGEHAGE
VGPGGEEEFVQVLRRQDGFRWSGFIVQVGAFVGALATFLLVA back to topmRNA from alignment at CM002462.1:629964..632228+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4014 ID=rna4014|Name=rna4014|organism=Nannochloropsis gaditana|type=mRNA|length=2265bp|location=Sequence derived from alignment at CM002462.1:629964..632228+ (Nannochloropsis gaditana)
GCTTACTTTCCGCCAACTCACACCATACCTGAACCGAGAAACCCAGTGAT
TATGGTCACAGGGACAATCTTGTCAATTGGGATTGGATTGGAACTGCCGC
TTTTGGTTTCAGAGAGATCcgcatcgccttcccccggccgGGAAGAAGGC
TGCGAGACGACTTGAGAGGACAAAAGAACCAGCTTAGGAGgttcctcatc
atcctcgcCTTGCTCGGTCAGGAGATCATCTTGCGAGCTTGTCATCTGTG
AAATTTTGCGATCGAATATAGCCTAAGTAAAATGTAGGAATGCGAGTCTT
GCAAATTGATCGATTCTAGTACGTACGACCCCTCATTTCAGTGCTTCGGA
GTCGGCGAGGGCTGCGGCTGGCACACTAGTTTTTATGCATTTATGGTATC
GCTGTAGTACCTTCGCATAAGATTGAACATACAATTGTCCAATCAAACAC
ATGAATATAGACTGGTTTATAGAGTCGTATGTCAGGTCTTGCGAGTAGCT
GAGAGGAAGGCAACGCGGAACGATGCTGCAGGCGTCTCCCCTCaaggccc
ccccccccgctcctccatggGCTCTGCAAGCCGCCTTTACGGCCTTGGGA
TTGTCTTCATTCATGCTTTCCAATGCGTTATGGGCGGAGATGCCGGCCCT
TGTCTCTGCTCTCCCGGAGGGCAACAAGCTCGGGAGCTATCTGCTTCTAT
CCTTGCAGGTGAGCAGTACGTGCAAGTGAAGGCTATTTGCATGTCACTCA
AGATTTGCGAAGGTACCGGTAAATAAAGACCAAACTATCTCTTATTGTGT
CTAGTAATCAATGGCCTTTCCCCAATCATTCCTCCACGCGTaatcttcct
cgccccttgAAGGCCATATGCTCACCCTCGatcctctcgctcctcggCTC
CGTTCAGGCCGCGAATGTGGTGCCTGTGATCGCCATGCTTCGGGGTCCGG
AAGTCGTGCATCTGGAATCCATCATTTGGGCGCTTCTCTTAGGAGGAGTG
GTGGCCAGCCAGCTCATGAGCTTTTGCTGGGCCGCTACCACCCCCATCCC
CGGGGCGGGTGGCAAGTCCCATgcgctctccctcattctccTGACATTCC
TCGCTGGTTGCATCAATaactcctccagcctcttcctctacccATTTGTG
GCTCGTTGGGAACGGCGGTACGTGTCGGCGCTggccacgggggaggggct
gtcGGGCATCCTGGTCTCCCTCATCGGGCTGACTCAGAACGTAGGCGGGG
CCCGGCCCCGCTTCTCCGTCCGGGCCTACTTCCAAGGGGTCAGCGCCTTA
TacgtcttctcccttctgggtttcctcttcctcctgcaagaaGAGAGGCA
CAAGAAAGCGCGCGTGGCCCTCAGCATGGATCGAGTTGTagcagaagaga
gggagactgCCTGGCAGGGGGGGGCCAAGAAGCGAGTGCTCCTGAGCGTC
AAGGACGAAGACAGCGATGCCCTAGTTGTGCCGCTGTCCGCCCCGACATT
GGcacccgcccccgtccttgccctcatTTGGCCCTTTCTCTTGGCCCAGT
TCGGGATCAGCCTCTGGGCCTATGGCGTCATTCCCGCCCTCACCCCCATA
TCCACCAGCGGCTACCAGCACGccgcccacgtcctgcagtactcctccat
cgtctctATGGCGCTCGATCCTCTTAGCCGCGCCCTCACCCATCGCCTGC
GCTGCTACCGGCTGCcgctcctcgtcgtcttggTCAACGTCCTTGCCACT
GTCCTCTGCGTGGCGGCCGCcatctccccccgcccgcccttcgtGGACCA
GCCGCTTGGAGGGCTCTTTGTCGTGTTTTTCAACGGAGCCTTTACcgccg
ccttcgccttcacctccaccatggTCTTCTTCTGCATCCACCGGGCCCTC
GGGCCGCGGCACGGGCTGCCTCTGCCCGTCCACGCGAgaagggctggagg
ggcggacgaggcgcCAGGCCTACAGGAAGATGCCTGCGCCCTGATGGTCG
GtcagaggcgggggggggggcgtccgGTGTCTattgggagaggagagggc
gagggcgagcaCGCGGGCGAGGtcgggccggggggggaggaggagttcgT
GCAGGTCTTACGGCGGCAGGACGGCTTTCGGTGGTCAGGCTTTATTGTCC
AGGTTGGAGCCTTTGTGGGCGCACTGGCCACCTTTCTTCTGGTCGCCTGA
CCCGGAACAAGCCGCCATGTAATATACATAAAGCAAAAGCAATGATCAAA
TGtggcgccccctcc back to topCoding sequence (CDS) from alignment at CM002462.1:629964..632228+ >rna4014 ID=rna4014|Name=rna4014|organism=Nannochloropsis gaditana|type=CDS|length=2958bp|location=Sequence derived from alignment at CM002462.1:629964..632228+ (Nannochloropsis gaditana)
ATGCTGCAGGCGTCTCCCCTCaaggcccccccccccgctcctccatggGC
TCTGCAAGCCGCCTTTACGGCCTTGGGATTGTCTTCATTCATGCTTTCCA
ATGCGTTATGGGCGGAGATGCCGGCCCTTGTCTCTGCTCTCCCGGAGGGC
AACAAGCTCGGGAGCTATCTGCTTCTATCCTTGCAGGCCGCGAATGTGGT
GCCTGTGATCGCCATGCTTCGGGGTCCGGAAGTCGTGCATCTGGAATCCA
TCATTTGGGCGCTTCTCTTAGGAGGAGTGGTGGCCAGCCAGCTCATGAGC
TTTTGCTGGGCCGCTACCACCCCCATCCCCGGGGCGGGTGGCAAGTCCCA
TgcgctctccctcattctccTGACATTCCTCGCTGGTTGCATCAATaact
cctccagcctcttcctctacccATTTGTGGCTCGTTGGGAACGGCGGTAC
GTGTCGGCGCTggccacgggggaggggctgtcGGGCATCCTGGTCTCCCT
CATCGGGCTGACTCAGAACGTAGGCGGGGCCCGGCCCCGCTTCTCCGTCC
GGGCCTACTTCCAAGGGGTCAGCGCCTTATacgtcttctcccttctgggt
ttcctcttcctcctgcaagaaGAGAGGCACAAGAAAGCGCGCGTGGCCCT
CAGCATGGATCGAGTTGTagcagaagagagggagactgCCTGGCAGGGGG
GGGCCAAGAAGCGAGTGCTCCTGAGCGTCAAGGACGAAGACAGCGATGCC
CTAGTTGTGCCGCTGTCCGCCCCGACATTGGcacccgcccccgtccttgc
cctcatTTGGCCCTTTCTCTTGGCCCAGTTCGGGATCAGCCTCTGGGCCT
ATGGCGTCATTCCCGCCCTCACCCCCATATCCACCAGCGGCTACCAGCAC
GccgcccacgtcctgcagtactcctccatcgtctctATGGCGCTCGATCC
TCTTAGCCGCGCCCTCACCCATCGCCTGCGCTGCTACCGGCTGCcgctcc
tcgtcgtcttggTCAACGTCCTTGCCACTGTCCTCTGCGTGGCGGCCGCc
atctccccccgcccgcccttcgtGGACCAGCCGCTTGGAGGGCTCTTTGT
CGTGTTTTTCAACGGAGCCTTTACcgccgccttcgccttcacctccacca
tggTCTTCTTCTGCATCCACCGGGCCCTCGGGCCGCGGCACGGGCTGCCT
CTGCCCGTCCACGCGAgaagggctggaggggcggacgaggcgcCAGGCCT
ACAGGAAGATGCCTGCGCCCTGATGGTCGGtcagaggcgggggggggggc
gtccgGTGTCTattgggagaggagagggcgagggcgagcaCGCGGGCGAG
GtcgggccggggggggaggaggagttcgTGCAGGTCTTACGGCGGCAGGA
CGGCTTTCGGTGGTCAGGCTTTATTGTCCAGGTTGGAGCCTTTGTGGGCG
CACTGGCCACCTTTCTTCTGGTCGCCTGAATGCTGCAGGCGTCTCCCCTC
aaggcccccccccccgctcctccatggGCTCTGCAAGCCGCCTTTACGGC
CTTGGGATTGTCTTCATTCATGCTTTCCAATGCGTTATGGGCGGAGATGC
CGGCCCTTGTCTCTGCTCTCCCGGAGGGCAACAAGCTCGGGAGCTATCTG
CTTCTATCCTTGCAGGCCGCGAATGTGGTGCCTGTGATCGCCATGCTTCG
GGGTCCGGAAGTCGTGCATCTGGAATCCATCATTTGGGCGCTTCTCTTAG
GAGGAGTGGTGGCCAGCCAGCTCATGAGCTTTTGCTGGGCCGCTACCACC
CCCATCCCCGGGGCGGGTGGCAAGTCCCATgcgctctccctcattctccT
GACATTCCTCGCTGGTTGCATCAATaactcctccagcctcttcctctacc
cATTTGTGGCTCGTTGGGAACGGCGGTACGTGTCGGCGCTggccacgggg
gaggggctgtcGGGCATCCTGGTCTCCCTCATCGGGCTGACTCAGAACGT
AGGCGGGGCCCGGCCCCGCTTCTCCGTCCGGGCCTACTTCCAAGGGGTCA
GCGCCTTATacgtcttctcccttctgggtttcctcttcctcctgcaagaa
GAGAGGCACAAGAAAGCGCGCGTGGCCCTCAGCATGGATCGAGTTGTagc
agaagagagggagactgCCTGGCAGGGGGGGGCCAAGAAGCGAGTGCTCC
TGAGCGTCAAGGACGAAGACAGCGATGCCCTAGTTGTGCCGCTGTCCGCC
CCGACATTGGcacccgcccccgtccttgccctcatTTGGCCCTTTCTCTT
GGCCCAGTTCGGGATCAGCCTCTGGGCCTATGGCGTCATTCCCGCCCTCA
CCCCCATATCCACCAGCGGCTACCAGCACGccgcccacgtcctgcagtac
tcctccatcgtctctATGGCGCTCGATCCTCTTAGCCGCGCCCTCACCCA
TCGCCTGCGCTGCTACCGGCTGCcgctcctcgtcgtcttggTCAACGTCC
TTGCCACTGTCCTCTGCGTGGCGGCCGCcatctccccccgcccgcccttc
gtGGACCAGCCGCTTGGAGGGCTCTTTGTCGTGTTTTTCAACGGAGCCTT
TACcgccgccttcgccttcacctccaccatggTCTTCTTCTGCATCCACC
GGGCCCTCGGGCCGCGGCACGGGCTGCCTCTGCCCGTCCACGCGAgaagg
gctggaggggcggacgaggcgcCAGGCCTACAGGAAGATGCCTGCGCCCT
GATGGTCGGtcagaggcgggggggggggcgtccgGTGTCTattgggagag
gagagggcgagggcgagcaCGCGGGCGAGGtcgggccggggggggaggag
gagttcgTGCAGGTCTTACGGCGGCAGGACGGCTTTCGGTGGTCAGGCTT
TATTGTCCAGGTTGGAGCCTTTGTGGGCGCACTGGCCACCTTTCTTCTGG
TCGCCTGA back to top
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