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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100001g129.8145.mrna |
| Orig protein id | gnl|cribi|Naga_100001g129.8145 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:572410..574066 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3991 ID=rna3991|Name=rna3991|organism=Nannochloropsis gaditana|type=mRNA|length=1153bp
CGCTTACTTTTTATGATGTTCATGTCTGATGCATGTATTCTTGCACAACA
TTGACAGGGGCCCGTCGCAGTTGACAATCGCAGTGGTCGACAGGGCTTAC
GCAGAAAGAAGGGCGTCATCTTGCAACGAACGTCATCTGAGAGAGGGCAT
ACGTACTCTCCCGCGCTAGCCGGCGTGTTCATACGCTCATGGAGGCCTCA
GGCCCCTCTTCACCTTCTAAGAAACCGGTATGGCAACCATCCTCCATGTT
TCTCCCGCCGAATCAGTCCGCACCGGGGTCCTCGAAGCAGCAGGAGCAAA
AACAGTATCGGCATTTCCAGCAACAGCATGCTCAGAACCCAAACCAGGAT
AGCACACCGACAGCAACCGCCTCGGCTGCAGAGAGCTACGACGATGCGTA
TTATCGGACGCTTTTGAATCGTGTGGATGCCCAACTTTTCCTCTCCCACT
CAGGCCCTGGCTTGGTGACTTTCCATGGAGGGCGACACGAGGAGGAAGAA
GGGGAGGTGTCAGAAGCAACAGCTCCCCCAGCTACACTGTGCGCCTGGAT
ACTGACATCTCACACGATTTTGGGCGCCTGCTGGCACCTTGAACTGGAAA
ACACTTTCACTCGCCCTCTTAAAATCTATTTTTTGCTGACTTCTCTTCTC
TTGGTGTTCTTCCTCAGCGTCAAGATCCGCCTAGCCACGTATTTCGCTGA
AATAGTCGTAATAGCGGTCATCACGAACGCCTTTCATTATTGCCAACGCG
AGGCTTTCTTTCGCTTTCAATCTTCACTTTTCCTTTGGCCGTTTTTGGCA
GCTGCCTTGACCTTCACGCTCACGGTCTGGGATGTGGTATTGGTGATCAA
GGGGGGCTCGGAGGGGCTGCACCACGAGGTAGGCGTGGCCATCGTCACGT
ATATTTTTGGGTTCCTGATTCCTGAGGTATTTGTACGGGCAATTCAATGG
CAGGGACAACGACGACCAAGAGAAGAAGGAGCTCGGCAGGATTCCGCAGA
GAGAGGTCCGGGTGGCGCCCATTTCGAGGAATACAGTATCTTGTAACATG
GAAATGCTGCTAATAAAAATTAAGTTCTTTGTACATACACACACACAGAC
ACCAAGTCCCAAATGTATTAAAACAAGTGAAGCATGGATATCGAACCTAC
TGA back to topprotein sequence of rna3991 >rna3991-protein ID=rna3991-protein|Name=rna3991|organism=Nannochloropsis gaditana|type=polypeptide|length=390bp
MEGLEEYPHPNAAPSTVGSNKGGPVEFRRSSQRTLLHHWERLEREYFRPA
TMQDIITLHVQLKSVQQTLEEAEAPCLYRKRLESSCDETFPSRSMAYLDK
RQLSNKASRRELLMSGVEDVLVTKSGYSRKRLPSYAHLSQGPPSDSSAST
SHCSFSDKETKFKRMNLRGSEQEVGANVRNLSRQQESDSKNQTARLKPKD
RRRAETLEEGDSAGMEDEDDEFETRSAFSRDDEDDQEEQEAGGEERSQEG
EMDVFSEEGGGSTEGSGEEEDVDFVREISQLSQRNRELHKILEGEVLKLS
RYARLECTAALATSCKVKVDGWNTGCAESAGSDGEHGICSALYGHGIHSQ
LQRRSHEHEEMTQQMRNVLRGGSMWHTDDATCELYRQLYR back to topmRNA from alignment at CM002462.1:572410..574066+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3991 ID=rna3991|Name=rna3991|organism=Nannochloropsis gaditana|type=mRNA|length=1657bp|location=Sequence derived from alignment at CM002462.1:572410..574066+ (Nannochloropsis gaditana)
GCAGGGCATGCTGATGGACGCCTGAATGTGTTGCCACGTGCGTCCGATAA
GAGATTTGTGTCTATTATTTCTTGTTCACGATTTTTGCTGCCCGCAGACT
CGCGCGCTTATATTCTTACACGCTCTAAGCACAGGATACGCCGGTCTATT
CTTTCCCAGCTTGTCTTTCCTGGTGGGTGTCCTCCGGCCGTCATCGGGGT
CAGGACTGTTAAGTCatggaggggttggaggagtATCCGCACCCAAATGC
GGCGCCAAGCACGGTGGGCAGCAACAAGGGGGGCCCTGTGGAGTTCAGGA
GGAGCAGTCAGCGGACGTTGCTGCATCACTGGGAGCGACTCGAAAGGGAA
TACTTCAGGCCCGCGACCATGCAAGACATCATAACCCTTCATGTTCAGGT
ATGTTGAAAAATCACAAGAATGAATGTCAGGCACTGCTCATACTCTTCTC
CAAAAATCCTCAGCTCAAGAGCGTGCAACAaaccctggaggaggcggaag
cgccCTGTCTCTACCGGAAGCGTCTTGAAAGCAGCTGCGACGAAACCTTT
CCTTCCAGGAGTATGGCTTACTTAGATAAGAGACAGCTATCAAATAAAGC
TTCGCGACGAGAATTGTTAATGAGTGGGGTCGAGGATGTTTTGGTGACGA
AATCAGGATACAGCCGAAAACGCTTGCCGTCATACGCACACCTATCACAA
GGACCGCCCTCTGACAGCTCAGCATCCACATCTCATTGCTCTTTTAGCGA
CAAGGAGACAAAATTCAAAAGGTAGATCTGAGAGGGAGCGTGGCGTTGTT
TTAGTCGCAATGAACCTTGCCCCAAGATGTGCTTCAGAATTACTTGCATG
CTTCATCGACACCTGACTCTGCACACACGCAGGATGAATTTACGAGGAAG
CGAACAGGAGGTTGGCGCCAATGTCAGAAACCTTTCAAGGCAACAGGAAA
GCGATAGCAAAAACCAGACCGCGCGCCTCAAGCCGAAGGATCGACGACGA
GCAGAGACGCTAGAGGAGGGCGATTCCGCCgggatggaggatgaggatga
cgagtTCGAGACACGCTCGGCTTTTTCTCGagacgatgaggacgatcaag
aggagcaggaggcagggggggaggaaaggtctcaggagggagagatggac
GTCTTTTccgaggaaggcggggggtccacggagggaagtggggaggagga
agacgtcgaCTTTGTCCGTGAAATAAGCCAGCTTAGTCAGCGCAATAGAG
AGCTTCATAAAAtattggaaggggaagtttTGAAACTTTCACGCTACGCG
CGCCTGGAGTGTACGGCTGCTTTAGCCACCTCTTGCAAGGTCAAGGTTGA
TGGTTGGAACACCGGCTGCGCAGAAAGTGCGGGTAGTGATGGTGAACACG
GTATTTGCAGTGCGCTATACGGCCATGGAATTCATAGTCAGCTTCAAAGG
CGTTCGCACGAACATGAGGAGATGACGCAACAAATGAGAAATGTGCTGCG
GGGAGGCAGCATGTGGCACACGGACGATGCCACATGCGAGCTGTACCGTC
AGCTGTATAGGTAGCGATTGATTCATTGTGACATAGCTGTGTGGATAGAT
GACCAAACGATTGATGTATACAAAGTGAACATTGACTGAAGCACCCGTCA
AGACCGC back to topCoding sequence (CDS) from alignment at CM002462.1:572410..574066+ >rna3991 ID=rna3991|Name=rna3991|organism=Nannochloropsis gaditana|type=CDS|length=3519bp|location=Sequence derived from alignment at CM002462.1:572410..574066+ (Nannochloropsis gaditana)
atggaggggttggaggagtATCCGCACCCAAATGCGGCGCCAAGCACGGT
GGGCAGCAACAAGGGGGGCCCTGTGGAGTTCAGGAGGAGCAGTCAGCGGA
CGTTGCTGCATCACTGGGAGCGACTCGAAAGGGAATACTTCAGGCCCGCG
ACCATGCAAGACATCATAACCCTTCATGTTCAGCTCAAGAGCGTGCAACA
aaccctggaggaggcggaagcgccCTGTCTCTACCGGAAGCGTCTTGAAA
GCAGCTGCGACGAAACCTTTCCTTCCAGGAGTATGGCTTACTTAGATAAG
AGACAGCTATCAAATAAAGCTTCGCGACGAGAATTGTTAATGAGTGGGGT
CGAGGATGTTTTGGTGACGAAATCAGGATACAGCCGAAAACGCTTGCCGT
CATACGCACACCTATCACAAGGACCGCCCTCTGACAGCTCAGCATCCACA
TCTCATTGCTCTTTTAGCGACAAGGAGACAAAATTCAAAAGGATGAATTT
ACGAGGAAGCGAACAGGAGGTTGGCGCCAATGTCAGAAACCTTTCAAGGC
AACAGGAAAGCGATAGCAAAAACCAGACCGCGCGCCTCAAGCCGAAGGAT
CGACGACGAGCAGAGACGCTAGAGGAGGGCGATTCCGCCgggatggagga
tgaggatgacgagtTCGAGACACGCTCGGCTTTTTCTCGagacgatgagg
acgatcaagaggagcaggaggcagggggggaggaaaggtctcaggaggga
gagatggacGTCTTTTccgaggaaggcggggggtccacggagggaagtgg
ggaggaggaagacgtcgaCTTTGTCCGTGAAATAAGCCAGCTTAGTCAGC
GCAATAGAGAGCTTCATAAAAtattggaaggggaagtttTGAAACTTTCA
CGCTACGCGCGCCTGGAGTGTACGGCTGCTTTAGCCACCTCTTGCAAGGT
CAAGGTTGATGGTTGGAACACCGGCTGCGCAGAAAGTGCGGGTAGTGATG
GTGAACACGGTATTTGCAGTGCGCTATACGGCCATGGAATTCATAGTCAG
CTTCAAAGGCGTTCGCACGAACATGAGGAGATGACGCAACAAATGAGAAA
TGTGCTGCGGGGAGGCAGCATGTGGCACACGGACGATGCCACATGCGAGC
TGTACCGTCAGCTGTATAGGTAGatggaggggttggaggagtATCCGCAC
CCAAATGCGGCGCCAAGCACGGTGGGCAGCAACAAGGGGGGCCCTGTGGA
GTTCAGGAGGAGCAGTCAGCGGACGTTGCTGCATCACTGGGAGCGACTCG
AAAGGGAATACTTCAGGCCCGCGACCATGCAAGACATCATAACCCTTCAT
GTTCAGCTCAAGAGCGTGCAACAaaccctggaggaggcggaagcgccCTG
TCTCTACCGGAAGCGTCTTGAAAGCAGCTGCGACGAAACCTTTCCTTCCA
GGAGTATGGCTTACTTAGATAAGAGACAGCTATCAAATAAAGCTTCGCGA
CGAGAATTGTTAATGAGTGGGGTCGAGGATGTTTTGGTGACGAAATCAGG
ATACAGCCGAAAACGCTTGCCGTCATACGCACACCTATCACAAGGACCGC
CCTCTGACAGCTCAGCATCCACATCTCATTGCTCTTTTAGCGACAAGGAG
ACAAAATTCAAAAGGATGAATTTACGAGGAAGCGAACAGGAGGTTGGCGC
CAATGTCAGAAACCTTTCAAGGCAACAGGAAAGCGATAGCAAAAACCAGA
CCGCGCGCCTCAAGCCGAAGGATCGACGACGAGCAGAGACGCTAGAGGAG
GGCGATTCCGCCgggatggaggatgaggatgacgagtTCGAGACACGCTC
GGCTTTTTCTCGagacgatgaggacgatcaagaggagcaggaggcagggg
gggaggaaaggtctcaggagggagagatggacGTCTTTTccgaggaaggc
ggggggtccacggagggaagtggggaggaggaagacgtcgaCTTTGTCCG
TGAAATAAGCCAGCTTAGTCAGCGCAATAGAGAGCTTCATAAAAtattgg
aaggggaagtttTGAAACTTTCACGCTACGCGCGCCTGGAGTGTACGGCT
GCTTTAGCCACCTCTTGCAAGGTCAAGGTTGATGGTTGGAACACCGGCTG
CGCAGAAAGTGCGGGTAGTGATGGTGAACACGGTATTTGCAGTGCGCTAT
ACGGCCATGGAATTCATAGTCAGCTTCAAAGGCGTTCGCACGAACATGAG
GAGATGACGCAACAAATGAGAAATGTGCTGCGGGGAGGCAGCATGTGGCA
CACGGACGATGCCACATGCGAGCTGTACCGTCAGCTGTATAGGTAGatgg
aggggttggaggagtATCCGCACCCAAATGCGGCGCCAAGCACGGTGGGC
AGCAACAAGGGGGGCCCTGTGGAGTTCAGGAGGAGCAGTCAGCGGACGTT
GCTGCATCACTGGGAGCGACTCGAAAGGGAATACTTCAGGCCCGCGACCA
TGCAAGACATCATAACCCTTCATGTTCAGCTCAAGAGCGTGCAACAaacc
ctggaggaggcggaagcgccCTGTCTCTACCGGAAGCGTCTTGAAAGCAG
CTGCGACGAAACCTTTCCTTCCAGGAGTATGGCTTACTTAGATAAGAGAC
AGCTATCAAATAAAGCTTCGCGACGAGAATTGTTAATGAGTGGGGTCGAG
GATGTTTTGGTGACGAAATCAGGATACAGCCGAAAACGCTTGCCGTCATA
CGCACACCTATCACAAGGACCGCCCTCTGACAGCTCAGCATCCACATCTC
ATTGCTCTTTTAGCGACAAGGAGACAAAATTCAAAAGGATGAATTTACGA
GGAAGCGAACAGGAGGTTGGCGCCAATGTCAGAAACCTTTCAAGGCAACA
GGAAAGCGATAGCAAAAACCAGACCGCGCGCCTCAAGCCGAAGGATCGAC
GACGAGCAGAGACGCTAGAGGAGGGCGATTCCGCCgggatggaggatgag
gatgacgagtTCGAGACACGCTCGGCTTTTTCTCGagacgatgaggacga
tcaagaggagcaggaggcagggggggaggaaaggtctcaggagggagaga
tggacGTCTTTTccgaggaaggcggggggtccacggagggaagtggggag
gaggaagacgtcgaCTTTGTCCGTGAAATAAGCCAGCTTAGTCAGCGCAA
TAGAGAGCTTCATAAAAtattggaaggggaagtttTGAAACTTTCACGCT
ACGCGCGCCTGGAGTGTACGGCTGCTTTAGCCACCTCTTGCAAGGTCAAG
GTTGATGGTTGGAACACCGGCTGCGCAGAAAGTGCGGGTAGTGATGGTGA
ACACGGTATTTGCAGTGCGCTATACGGCCATGGAATTCATAGTCAGCTTC
AAAGGCGTTCGCACGAACATGAGGAGATGACGCAACAAATGAGAAATGTG
CTGCGGGGAGGCAGCATGTGGCACACGGACGATGCCACATGCGAGCTGTA
CCGTCAGCTGTATAGGTAG back to top
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