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Properties
| Property Name | Value |
|---|
| Product | Na /H antiporter |
| Orig transcript id | gnl|cribi|Naga_100001g132.8181.mrna |
| Orig protein id | gnl|cribi|Naga_100001g132.8181 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:566723..569485 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3988 ID=rna3988|Name=rna3988|organism=Nannochloropsis gaditana|type=mRNA|length=1215bp
CGAGCACTTCTGGCCGAGGATGCCATCAACGTCCAGCGTCTCCCGGAGCC
GGGCGTTATACTCCCAGTTACACCCACACAATGGCAGGAGCCGGCACGAA
ATGTATATTTTATGTGGGAAATATGTGCACTCTCTGACTGCTCAACTTGC
TATACATGTGCGAAATTACATCGTTCGCGGCGCGAGGGACTTGATGGTAC
ACTGTCTCATAGCAGATGATTGCAGAGCTATCACTAGTGCAAATCAAATT
GGAAAACTCAGTGTTTGCCTGCTTGTCCCCTAACACTTTTACAGAGTTGG
GACAACCTTCGCAAGATGTCAGGTCCAAGTCATCCTCATCCACCCGCGGA
CGTCCCAACCACCCCATCAGCTGCTGAACACAAGTATCCGGCTGCAGAGC
TGAAATGCTCGAAGCCGGATTTGCTATTTACCTCCCCGCCGCCTTTTCCC
CTGCCTTTTTACAAGTATGTCTCACTACCACAGACGCCAGCTGGTATGGT
TGCGGTAGCCCCTCCCAACCCTCAGGAGAACTGCGTAGGCCGTAGTGTGT
TCGGAGCTGTGGCTGGGGCGGGTCTAGGGGTGATGATGGGCATTTTTTTG
GGTGCCATGGGGGACATGTCGCCCGCCATCCCCATAATTAACGGTCGCGA
AGCACCTCAGGCGCCTGCAGGGGAGCAGCTGCGACTGGCTTATCGTGCTA
CCTTTGAGCGGTGCGGGCACTGGGCAAGAAACTTCATGGCGCTTACGGCA
TTGTTTTCGGGCGTGGACTGCGTGGTGGAGAAATTTCGCGGGAAGCACGA
CGCGTACAACGCGGTGATATCAGGGTGTGGAGTGGGTGCAGCGCTCTCAG
CCAAGCAAGGCCCACAGGCGGCGTGTTTGGGATGTGCTGGCTTTGCAGCC
TTTTCTGGAATCATGGAGGTGGTGATGGGGCCGCATTAAGTAAAGCGATT
CTGCTTGGTGGATTGCCACAAGGGTTACTTTCTGTTTTGCTTTGCTTTAC
GGAATGATAACTACAAACCTAACGATCTGACAAAAGAGCCCACGTCCCGA
TAGAGACACTGATAAATCTGTATAAAAGCCTCAAGCAATTCACGTGCTGG
CTTACATTTTCGCTCAATCGCGCCTTCTTGCTTTCCCCCCGGAGAATCCT
ATGCACGAGAAACGGAACCTAGCAATCATTGATCAAGAAGTGGCGGCACA
ATTTCGCCGGCTCGA back to topprotein sequence of rna3988 >rna3988-protein ID=rna3988-protein|Name=rna3988|organism=Nannochloropsis gaditana|type=polypeptide|length=739bp
MKGSLLSFLALLVATRAWLPVRHPSLPSRVALRRPLPSGQAMRHHHTLRM
ADSAPPTQLTQAEIVPSEPFRPDLGVGREAKLTKVLELNEGAVNFVRVRV
DELTLSAVKKMNEKGADCCLIFNPDGSLAGIFTERDYIRKIVEAQRRTKE
TPIEEVMTSADLVVSAPPDMTVGECMSLMVQNKIRHIPVRAVPEGVVMGV
ISTTDLVNTMKLDDESLAGAFPIGALEPSLVQDILSRTRERANELAVKAG
PRLGMQDLVRGGWVGVGAGVLALLLQGNWLHDHEVLSMCAIFGLGYVSII
FENIFEFNKAAVGLLMAVALWVIYAGTAGAQGVASAGALKELAEHVSEVS
EIIFFLLGAMTIVEIVDSHQGFRVVTDLIKTKSKKALMWTVGLLAFFMSS
VLDNLTTTIVLLSLLRKLIPNTEARKLFGALVVIASNAGGAWTPIGDLTT
TMLWINGQISALPTMRDLAVPSLVSLLISTYLLTWGIPDTDREFEEEMAR
NQQNAVNTELAPRGKLVFATGLTGLLSVPVFKALTGLPPYLGMLSALGVM
WVLTDTIHAGEEEEELKVPAALAKIDVSGILFFFGILLSVGALDSAGILQ
SLASFLQSHIPSDKIIATLIGIFSAIIDNVPLVAATMSMYDLQTTPMDAP
LWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYFKKITFAAFIGYM
GGVGTYLAVKYGLASAVSAAVLPIVSSVFDGKIPLISGM back to topmRNA from alignment at CM002462.1:566723..569485+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3988 ID=rna3988|Name=rna3988|organism=Nannochloropsis gaditana|type=mRNA|length=2763bp|location=Sequence derived from alignment at CM002462.1:566723..569485+ (Nannochloropsis gaditana)
agggcaattCAGCACGTGGGAGTGGGCATACAGCCGCCCAGGGTATTtat
gtcttcctccgcgctgCCATCCGGAAAAAGACTGGACCTTTTTCATGTCG
AATGGTCACGACATGAAGCCGGCTATGACCGTGGCTACACGACAGCATGC
TATGAAAACCTCGCATGCGAGACGCAGGGGCGAGAAAAATAAGTGTTGCG
TCTGGAAAGCAAGTACACGCTCGGGTACACCCTCGACGCGAAACTAATTT
TCTACGTAAAATTACTCCATACACATAGGTTGCGGTCTAGCTTGCTTAAG
AGAGAATCAAGCCTCATGAAGGGAAGCCTGCTTTCATTTCTGGCATTGCT
GGTCGCGACTAGGGCCTGGCTGCCCGTCCGGCACCCGAGCTTGCCCTCTC
GCGTAGCCCTCAGGAGACCCTTGCCTTCGGGACAGGCCATGCGCCACCAT
CACACGCTCCGGATGGCAGACAGTGCTCCACCCACACAACTCACGCAGGC
AGAAATAGTTCCATCGGAGCCTTTCCGGCCCGATTTGggtgtagggaggg
aggcgaagtTGACCAAGGTCCTCGAGCTCAACGAAGGCGCCGTCAACTTC
GTCCGCGTGCGTGTGGATGAGCTCACCCTCTCTGCAGTGAAAAAGATGAA
TGAGAAAGGGGCGGATTGCTGCTTGATCTTCAACCCAGATGGCAGCCTGG
CCGGTATCTTCACCGAACGGGACTACATCCGAAAGATCGTTGAAGCTCAA
CGGCGCACGAAAGAGACGCCCATCGAGGAGGTGATGACCTCCGCCGACCT
GGTTGTGAGTGCGCCGCCCGATATGACTGTGGGCGAATGCATGTCTCTGA
TGGTCCAGAACAAAATCCGGCACATCCCCGTCCGCGCCGTGCCAGAGGGG
GTGGTGATGGGCGTCATCTCCACCACGGACCTGGTCAACACGATGAAGCT
GGACGACGAGAGCTTGGCGGGGGCCTTCCCCATCGGGGCCTTGGAGCCCT
CCCTGGTCCAAGATATTCTGAGCCGGACCCGGGAGCGCGCGAACGAGCTG
GCTGTGAAGGCGGGCCCGAGGTTGGGGATGCAGGACTTGGTGCGGGGAGG
CTGGGTGGGCGTGGGCGCCGGCGTCCtcgccctgctccttcagGGGAACT
GGCTGCACGACCACGAGGTACTGTCCATGTGCGCCATCTTCGGGCTCGGG
TACGTGAGCATCATCTTCGAGAACATCTTCGAGTTCAACAAAGCGGCCGT
GGGGCTCCTGATGGCCGTGGCCCTCTGGGTCATCTAcgcgggcacggcgg
ggGCCCAGGGGGTGGCGTCCGCGGGGGCGCtcaaggagctggcggagCAC
GTCTCGGAGGTGTCGGAGatcattttcttcctgctcGGGGCCATGACCAT
CGTGGAGATAGTGGACTCGCACCAGGGCTTCCGCGTGGTCACGGACCTGA
TCAAGACCAAGAGCAAGAAGGCCCTCATGTGGACTGTGGGTCTGCTCGCT
TTCTTCATGAGCTCCGTCCTGGACAacctcaccaccaccattgtcctcct
ctccctcctgcgcaAGCTCATCCCCAACACGGAAGCCCGCAAGCTCTTCG
GCGCCCTGGTGGTGATCGCCTCCAACGCGGGCGGGGCCTGGACCCCCATC
GGCGACCTCACGACCACCATGCTCTGGATCAATGGCCAGATCTCCGCCCT
GCCCACCATGCGAGACCTGGCGGTGCCCTcgctcgtctccctcctcatca
gcaCCTACCTCCTGACCTGGGGCATCCCCGACACGGATCGCGAGtttgaa
gaggagatggcgcgCAACCAGCAGAACGCCGTCAACACCGAGCTGGCACC
CCGAGGAAAGCTTGTCTTTGCCACGGGGCTGACGGGCCTCCTGAGCGTGC
CCGTGTTCAAGGCGCTGACGGGCCTGCCCCCCTACCTCGGCATGCTCTCC
GCCCTGGGTGTCATGTGGGTCCTCACGGACACCATCCACGccggtgagga
ggaggaggagctcaaggTGCCGGCAGCCCTCGCCAAGATCGACGTGTCGG
gcatccttttcttcttcggaATCTTGCTGTCTGTGGGCGCGCTCGACTCG
GCTGGAATCCTCCAATCTttggcctccttccttcagTCCCACATCCCCTC
CGACAAAATCATCGCCACCCTCATCGGCATCTTCAGTGCCATCATCGACA
ACGTGCCCTTGGTCGCTGCGACCATGTCGATGTATGATCTCCAAACCACG
CCCATGGATGCCCCTCTCTGGCAGCTGGTCGCCTACTGCGCCGGCACGGG
AGGCTCGCTATTGGTGATAGGCAGTGCTGCCGGCGTAGCTCTCATGGGCC
TTGAGAAAGTCGACTTTCTCTGGTACTTCAAAAAGATAACATTCGCAGCA
TTCATAGGCTATATGGGAGGTGTCGGCACATATCTCGCTGTTAAATACGG
TCTGGCGTCGGCCGTGAGTGCAGCTGTCTTACCTATCGTATCCAGCGTTT
TTGATGGCAAGATTCCCCTTATTAGTGGCATGTAGAATATTTATTTCACA
GAAAATAACCCACATATTGCGGTGGGAAAGCTAATAAATGGGGCAACTGC
ATATTAAAGCTCCGATTATAGACATGCCAGGCACTTAGGGTCAGTTTAAA
ACGTGCAGTAGTGTGTTAATTAAAGTGAAAAATGTGCTTCATGTCGTCAT
AATATAAGCTCTTCCTCGCTGCTCGCGTCCATTAAAAAAACATCGCAGTA
TGGAACGGGAAAC back to topCoding sequence (CDS) from alignment at CM002462.1:566723..569485+ >rna3988 ID=rna3988|Name=rna3988|organism=Nannochloropsis gaditana|type=CDS|length=2220bp|location=Sequence derived from alignment at CM002462.1:566723..569485+ (Nannochloropsis gaditana)
ATGAAGGGAAGCCTGCTTTCATTTCTGGCATTGCTGGTCGCGACTAGGGC
CTGGCTGCCCGTCCGGCACCCGAGCTTGCCCTCTCGCGTAGCCCTCAGGA
GACCCTTGCCTTCGGGACAGGCCATGCGCCACCATCACACGCTCCGGATG
GCAGACAGTGCTCCACCCACACAACTCACGCAGGCAGAAATAGTTCCATC
GGAGCCTTTCCGGCCCGATTTGggtgtagggagggaggcgaagtTGACCA
AGGTCCTCGAGCTCAACGAAGGCGCCGTCAACTTCGTCCGCGTGCGTGTG
GATGAGCTCACCCTCTCTGCAGTGAAAAAGATGAATGAGAAAGGGGCGGA
TTGCTGCTTGATCTTCAACCCAGATGGCAGCCTGGCCGGTATCTTCACCG
AACGGGACTACATCCGAAAGATCGTTGAAGCTCAACGGCGCACGAAAGAG
ACGCCCATCGAGGAGGTGATGACCTCCGCCGACCTGGTTGTGAGTGCGCC
GCCCGATATGACTGTGGGCGAATGCATGTCTCTGATGGTCCAGAACAAAA
TCCGGCACATCCCCGTCCGCGCCGTGCCAGAGGGGGTGGTGATGGGCGTC
ATCTCCACCACGGACCTGGTCAACACGATGAAGCTGGACGACGAGAGCTT
GGCGGGGGCCTTCCCCATCGGGGCCTTGGAGCCCTCCCTGGTCCAAGATA
TTCTGAGCCGGACCCGGGAGCGCGCGAACGAGCTGGCTGTGAAGGCGGGC
CCGAGGTTGGGGATGCAGGACTTGGTGCGGGGAGGCTGGGTGGGCGTGGG
CGCCGGCGTCCtcgccctgctccttcagGGGAACTGGCTGCACGACCACG
AGGTACTGTCCATGTGCGCCATCTTCGGGCTCGGGTACGTGAGCATCATC
TTCGAGAACATCTTCGAGTTCAACAAAGCGGCCGTGGGGCTCCTGATGGC
CGTGGCCCTCTGGGTCATCTAcgcgggcacggcggggGCCCAGGGGGTGG
CGTCCGCGGGGGCGCtcaaggagctggcggagCACGTCTCGGAGGTGTCG
GAGatcattttcttcctgctcGGGGCCATGACCATCGTGGAGATAGTGGA
CTCGCACCAGGGCTTCCGCGTGGTCACGGACCTGATCAAGACCAAGAGCA
AGAAGGCCCTCATGTGGACTGTGGGTCTGCTCGCTTTCTTCATGAGCTCC
GTCCTGGACAacctcaccaccaccattgtcctcctctccctcctgcgcaA
GCTCATCCCCAACACGGAAGCCCGCAAGCTCTTCGGCGCCCTGGTGGTGA
TCGCCTCCAACGCGGGCGGGGCCTGGACCCCCATCGGCGACCTCACGACC
ACCATGCTCTGGATCAATGGCCAGATCTCCGCCCTGCCCACCATGCGAGA
CCTGGCGGTGCCCTcgctcgtctccctcctcatcagcaCCTACCTCCTGA
CCTGGGGCATCCCCGACACGGATCGCGAGtttgaagaggagatggcgcgC
AACCAGCAGAACGCCGTCAACACCGAGCTGGCACCCCGAGGAAAGCTTGT
CTTTGCCACGGGGCTGACGGGCCTCCTGAGCGTGCCCGTGTTCAAGGCGC
TGACGGGCCTGCCCCCCTACCTCGGCATGCTCTCCGCCCTGGGTGTCATG
TGGGTCCTCACGGACACCATCCACGccggtgaggaggaggaggagctcaa
ggTGCCGGCAGCCCTCGCCAAGATCGACGTGTCGGgcatccttttcttct
tcggaATCTTGCTGTCTGTGGGCGCGCTCGACTCGGCTGGAATCCTCCAA
TCTttggcctccttccttcagTCCCACATCCCCTCCGACAAAATCATCGC
CACCCTCATCGGCATCTTCAGTGCCATCATCGACAACGTGCCCTTGGTCG
CTGCGACCATGTCGATGTATGATCTCCAAACCACGCCCATGGATGCCCCT
CTCTGGCAGCTGGTCGCCTACTGCGCCGGCACGGGAGGCTCGCTATTGGT
GATAGGCAGTGCTGCCGGCGTAGCTCTCATGGGCCTTGAGAAAGTCGACT
TTCTCTGGTACTTCAAAAAGATAACATTCGCAGCATTCATAGGCTATATG
GGAGGTGTCGGCACATATCTCGCTGTTAAATACGGTCTGGCGTCGGCCGT
GAGTGCAGCTGTCTTACCTATCGTATCCAGCGTTTTTGATGGCAAGATTC
CCCTTATTAGTGGCATGTAG back to top
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