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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100001g159.8164.mrna |
| Orig protein id | gnl|cribi|Naga_100001g159.8164 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:514649..515983 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3961 ID=rna3961|Name=rna3961|organism=Nannochloropsis gaditana|type=mRNA|length=1740bp
ATGGGCAAAGCTAGAAAGCGTTTTATTGACCCAGCAAATTCGCAGCATTT
CTATGTAGTACACCGCAGCCAGCGGGATGCGAATGGCGACGACCCTAAAG
CTTCTCAATATGTCTTGTTGCCAGGACGGCGTGGGAACGCAGCGGACCGC
GGAGAGGCAACTGAACCAAGTCAACGCGAGAAGGATATCCGCTGGCGGGA
TCACATCAACGAATTAGGCCTGCCAAATGATGGATACAATTATGGTAGAC
ACTTGAAAACAATGGGGGGTGGTCGCTTCATTGCTGCTTCTGGAGAGATA
GTACAGGCGCGCACAAGAGGAGGCGTCTACCAGCTTGCGCAGGGGTCAGG
CCTGCAGGACGAGAGAATAGCGGGAGATGAAGGAGTTGCGCCGTGCCGTG
AAGAAAGATTGAAGCCAGTTGTGGATGCTATTACCTTGTCAGCTGATTGC
ATGGACGAGGAACTTGAAAGGGCATTGTTTGGGAGCGATACGGAAGATGG
GGAGGAGAAGGTCGAAGGCGTGAGGGGCTGTGGGGAGTTGAATGACGACT
TTATCTTGCAGGCAGGCAAGGAGCCGAAGGAAGATCTAGATGAAGAGGAC
GGTGAGGTTGATGGTAATGGAGGAGGGGACAAGTTCGACTTCGAAGCTCA
CATGGCAATGTTGATCGCGAAAAGCGAAAAGTCCTTGGGTTGGGCTCCTG
CGCGCGGATGGGGGCATGGGGAGCTGGAAAGCATGCAACGCGTGACGCCG
AGTAGACATTTAGGATTTCGAGATTCTGATGATGAAAAAACATTGGAATT
GAGCCGCAGATCCAAAAAAATGGGTGCTGCGGCAAAACCGCATGATGCAA
CGCGGATGAAAGAGTCATCAGGCGAAGGAGGAATGCCGAAGTCTGGCAAG
CATCGGTCGCGTTTTGAGGAGGAGTTTGAAGATTTGCTGACAGAATACGG
GGAAGAAGATATCGGGGGCCTGGAGGGTACAGAAGAAGAGGCAAGCGCTC
GAGGGGGGCCAGGAGCCGTGAAAGAAGAGGAAGATAGGATTGAAGACATT
TTGGACAACTTCCTGAGGGCTAAAATTGCATGCACAGCGCGCCAGGGGAA
GAGGGATGGCCATTCTGAGCTAGAGGTTGGGAGGAAGGGGCGCCCAGGGT
CATCGGGTAGCTCCACGCTAGTTATGGAGGAAGATGAGATACATGAAGGA
GCGGAGGAGATATTGGAGACCGGAGCAGATGACATAGAGGACTTCATCGC
CAAGCATGACTACCTCGGGGACCGAGATGGCCTAGTGCCGTGGGATTGTG
AGACAATCCTGTCGACTTGCTCCAATTTGGACAATCACCCTAGCCTCATA
AGCGAGCAGCGGGGCAGGCAAGGGAGGAAGATGCATGGCAAGCACTGTTC
AGAGCTGCCACGTTTGCCGGAAGGTCGTGACGTAGGATTATGCCCCGAGA
ACGCGGCAGAAATGGTGGCTCTCTCGAAAAAAAGTGGGCTGCCTTTGGGA
GTCTTGCCGCTGGCACCGAAGAAAGCAATTTCAAATGCAAATACAGGAAG
CAAGAGAGACAAGGATGAAAAGGTGCTGGACAAACGAGCTCGTAAGGCCG
CAGTGAAACTAGCGCGGCGGGAAGGTCGAGCGAGAAAAAAGGAAATGACG
CAAGCCTTTAAGGAAGTCGAGAAAGTGGCGGGGCTCCAGTCCCGAAGCGG
CGAGACGGCAGTAAATCGGAGTGTTTTTCAATTTTCGTGA back to topprotein sequence of rna3961 >rna3961-protein ID=rna3961-protein|Name=rna3961|organism=Nannochloropsis gaditana|type=polypeptide|length=183bp
MYVSTAKIHGKFSPLVAAVLFFLLTHVPLAVGGSLHEGDWTQKKEDETIT
GGREPSTRVKGKQRRRMATHVNDEEILHLLRHDPVEMTLEEASDWQRVKR
RLSKAREETGWFHRVEDVYVPPDSALRFKKDVDNSKDGSLFAGDYFRRTS
SDQQEEKVVRSSSKGKEAANEYRIFERARKNAI back to topmRNA from alignment at CM002462.1:514649..515983- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3961 ID=rna3961|Name=rna3961|organism=Nannochloropsis gaditana|type=mRNA|length=1335bp|location=Sequence derived from alignment at CM002462.1:514649..515983- (Nannochloropsis gaditana)
CGTAGACACGGCGTCGCCGAGTCAGGCTACCGGCCTCAGCGAGAGGAAAA
AAGGGCGCACGAGTCTCTGTATAACGTCACGCGTCTGCTTGACGGCATCG
AATGCTTGATCGCGTAGGTCAGTCTTGCACGTTGAGCGGGTGCGTCGACT
CTCAAGAGCAGTGCAGACCTATTTTCGTCTTTCTGCGCCCGGTCTCCTTC
TTTACTCAACATCCGAGCAAAGAAAACCTTACCCCCCCTAGCTGAAGAGA
CGACTTCTGTTTGGGCATGACCATGGACACCTCATTCTCCTCTAGAGAGT
AAAAGTAAGCAAGTAAAAGCAGGACGGCAAATGATTATGTGCTGCCAAAA
GTCTAATGGCTTTCATATGTCATGTCATACGACGCTTGTTGACATCTGAC
AATCAAAACTCCACACCAGAACTCGCACTAGAATTCATCCACTAGGGTAA
TGTATGTCTCGACTGCAAAGATACATGGCAAGTTCTCTCCGCTCGTAGCG
GCTGTCCTGTTCTTCCTTTTGACACATGTCCCCCTAGCTGTTGGGGGCTC
TCTGCATGAAGGTGATTGGACCCAGAAGAAAGAGGACGAAACTATCACTG
GTGGTAGAGAGCCATCTACTCGGGTCAAAGGTAAGCAGAGGCGGCGTATG
GCGACGCACGTCAATGACGAAGAAATCCTTCATTTACTTCGGCATGACCC
CGTCGAAATGACTTTGGAAGAGGCCAGTGACTGGCAGCGTGTGAAACGCA
GATTAAGCAAAGCCCGTGAGGAGACCGGATGGTTCCACCGCGTTGAAGAT
GTTTATGTACCACCCGACTCGGCGCTGCGTTTTAAAAAGGACGTGGACAA
CAGCAAAGATGGAAGCCTTTTTGCAGGGGACTACTTTCGCCGGACTTCCA
GCGATCAGCAGGAGGAAAAGGTTGTAAGATCAAGCTCCAAGGGGAAGGAG
GCTGCGAATGAGTACCGGATCTTTGAACGCGCGCGGAAAAATGCGATCTA
GCAGTCGAGAGAATGAGTAAGGAGGAAAGTGGGAATGGACATGGGTCATC
GCAGGCACCATGGCGGATGCTCATGTTGTCTATGAGATGCGATATGCCTT
CGTCAGATTTGCGGTTGCAGTTCGTAAGTTACAAGTGAAATCCATTCTTT
TGAAGCACTCTAACATTTTTTTGTGAATATCATCTACACTTATGAAAGTT
TGAATACTTCTTGCTTGCCTAACGCGGGATAGAAAAAAGTATATGTGCAT
CTACAAGAACCATATAGTCAATCTCTTTCACTTAGATACAGAGTTTGCAA
TCACGAAAATTGAAAAACACTCCGATTTACTGCCG back to topCoding sequence (CDS) from alignment at CM002462.1:514649..515983- >rna3961 ID=rna3961|Name=rna3961|organism=Nannochloropsis gaditana|type=CDS|length=552bp|location=Sequence derived from alignment at CM002462.1:514649..515983- (Nannochloropsis gaditana)
ATGTATGTCTCGACTGCAAAGATACATGGCAAGTTCTCTCCGCTCGTAGC
GGCTGTCCTGTTCTTCCTTTTGACACATGTCCCCCTAGCTGTTGGGGGCT
CTCTGCATGAAGGTGATTGGACCCAGAAGAAAGAGGACGAAACTATCACT
GGTGGTAGAGAGCCATCTACTCGGGTCAAAGGTAAGCAGAGGCGGCGTAT
GGCGACGCACGTCAATGACGAAGAAATCCTTCATTTACTTCGGCATGACC
CCGTCGAAATGACTTTGGAAGAGGCCAGTGACTGGCAGCGTGTGAAACGC
AGATTAAGCAAAGCCCGTGAGGAGACCGGATGGTTCCACCGCGTTGAAGA
TGTTTATGTACCACCCGACTCGGCGCTGCGTTTTAAAAAGGACGTGGACA
ACAGCAAAGATGGAAGCCTTTTTGCAGGGGACTACTTTCGCCGGACTTCC
AGCGATCAGCAGGAGGAAAAGGTTGTAAGATCAAGCTCCAAGGGGAAGGA
GGCTGCGAATGAGTACCGGATCTTTGAACGCGCGCGGAAAAATGCGATCT
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