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Properties
| Property Name | Value |
|---|
| Product | CheY-like superfamily |
| Orig transcript id | gnl|cribi|Naga_100001g162.8143.mrna |
| Orig protein id | gnl|cribi|Naga_100001g162.8143 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:509757..510823 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3958 ID=rna3958|Name=rna3958|organism=Nannochloropsis gaditana|type=mRNA|length=4610bp
GCACGCCATGAGCGTTCGCTAAAAGAGGGTAGACCTACCTTTCGACACCG
GCACTCTTCACGGACATATCCCCGGTCGTGGACACCCTTCTGCCTCCACC
ACCACTCGACAATCATGCCCGGGCCACACAGGAGGACTCAGGCCGCTTTA
AATCTCTCCCTCGCATTCTTTTTTTCTACTCGATGGTTGGCCTACTAAAC
AAGTAATCACTATATATTGAACACTTTTGCACTGTGGTACCCATATTTCA
CGTCTGCCACAGTCTTGCCCTACAACTCCATAATCAGACTCGGAGAGCCC
CTAAGGAATAGATCGTAGGGGGGGTAGGGTCCCGAAGGCAGCACTGGATG
CACCATCACATCCAGTGCCGCCTCGCATGGAAAGATAATAGGAGCGCGTC
TCTTGGTTCTTGATACGCTAGTCCTTCACTGTTCCATTGCAGTTCACACA
CCACATACCAGTGAACACTTGAGGATAAACACATCTCCTCGGCGAATAAC
CTGTGACTTGCCAACGAAAGAAAGTCAACGTCCTCTGCCGACGTGAATCC
CTCTGAAGATGTTCGCACGCGGCACGTATTCTTTGCTTACGCACGAGACA
CGGTGCGCGCGTGGTGCAAACCGATTTAGGTGACACAGACCTGGCAGGAG
TCCCACCCTCTCGTGCCACGCGTCCCGTAGCTATATGCATAGGTCCTTAT
AGGTTGACAATACCCACAGGGAGAAGCAAGGTACAGAGAAATACCAAAGA
GGTAAAACTATGACAACACCTTCTTCCCCGAGAAAAAGTCTATACTCCCC
TGCGTGATTCCCGCCGGGTGGTATAGCGGCTCGGCTCGGCCTGGAAGATA
CCCAAAGTGCGCTATTCTGTCTACACATCGAGAAACATCTATCACTCACT
TATAGCGCGATGGTTCGGTGCGTCGAGTTAGCTGCCACAACGTTTCGCTT
GTTTCCAGGGAAAAGGTAAAACTCTGCACCGATCACTGTTGGACATCATC
CTCATTGTATAAATGACAGGTAGCTTGCTCTTGTAGGCCTTGTCGCGGCT
TCTATAATACATGGCACCCAGAGGATGGGCGACAGTCTCAGAGAGGGCAC
TGCTGAGACAAGAGATACAAGAGGAGCAGCGAAAAATACCAACCAGGCTT
CCTTGCAATAATAATCCAGGCCAAAGCAAGAGAAGGAAAGGAACAAGGCA
TATCGTGACGATGACGAGTGGCCTCCTTCTTCTGGCATGCCCGCGGATCC
TTGGCATGACCCATCTCGATATTGGAACAAAGCGTCAGCCGATTTCCTCT
GTTGCATTTCTCCACTGCTTGCCGTCCAACGCACAGCCTGCCCATAGTCA
GCCTTTCTTTGCGACTTTCTCACCTGCCTCCTCATTATTCTCTGCCTCAA
TGCTTTCCTACTCGCCACCCCCTTTATTTTTCGTCTCAAGAGCCGGCTCC
ATCCGACATGAGCGCTGGCGACTGTGCAGACGGACGAGGAGAGGCAGACA
AGAATCTCAAATGAACGGGGACGTGTACGAAACAGTACAGGAGGAGGATT
CCCGGAAGTATGCCGAGATTATGCGGGAGGTTGCCGAGAGGTTCACTGCT
GGTGAAGAGATATACCGCAGTGAGACGGGCCTCAAAATGGCAGTGGCAGA
GCTAAATAGTTTGGAAGCCACTGCCCAGATGTTGCAGAAGGAGGAAGAGG
AAGCCAAGATAGAGGAAGCAGAACAACAGGCTGAGGCGGAGCGCCTGCGG
GCGATAGTAATGCGCCGCAACGGAACGAGAATGCGGAGAAGCAGCAGCAG
TGCCAAGTCAGATCAGCTTGAAAAAAGATATGGAGGAGATGTAGTAAGAG
ATGAAGAAGGCATGGAGGGACAATCGATGCGGAGTGCTTCTGAATCAACT
CATTCCAGCGCGTTCAGAGACTTTTCCGAAGGGCTTTTTTCATCTTTCCA
ACCGGACTTGCCCGATTTTCTGGACGTCAAGACGATGGGCTTGATGGGAC
GATGGGAGGAGATAGGAGGCAATTTCTTGCTCCGTCCCCCAGATCACGAA
ACATCTCCGCCCAAAGCAGTCCTTCACTTCCTTGGGGGCGCCTTTGTCGG
GGCCGCGCCTCATCTGACATATCGCTACCTCCTAACGGGACTGGCGGAGC
AGGGGTACCTGGTGGTGGCCACGCCCTACCATCTGTCATTCGACTACGTG
CAAGTCTGCGACACAGTACTAGAACGCTTCGAGAGGGTTGCCATCCCCCT
GGCGAAGGAGTACGGTGCCTTGCCGGTGGTGGGCATCGGGCACTCCTGCG
GGGCCCTGCTCCAGGTCCTCATTACCTGCCTGTTCCCCGACACGCCCAGG
CTCGCCAACGCCCTCATCTCCTTTAACAATCAGATGGCTCAGAAGGCCAT
CCCGGCCTTCGAGGAGCTGGTAGTGCCCCTGTCCCTCTCGCTCATGGGCG
AGGACGGACTGGGCGCCGAGACCCCCGGCATGACGGGGGAAGGCGGGGCT
CTGGGGCCGGGGACGGCCTTGCGCCAGTCTCTGGGTCGTCTTCGCCAGAA
CCTCGAGGAAGTAGTGGAAGCATACGCAGTCAGTCCGTTGGCCCCCTCAG
TAATCCAAAACGAAGTAGTGCCCCTGGTGAAACAGGCGATGTCGGTGGTC
GACCAGCTGCCCCCCCTCTTGCAGTCTATATCAGACGGAGCCAGGGAGTT
CGCGCCTACACCAGATGACACGCGAGAAGTATGCAGGCGGATGTACAGGG
CACGACGAACGCTTTTGGTTCGATTTGAAGACGACTCAATCGATGAGAGC
GAGAACTTGATGAAGGTTCTGCAGGAATCTCGCTCGATTATGCGGATGAA
GAGGCCCCTGGTCAAGATGGACGTGCGCCTGGAAACGATTAAAGGCACAC
ACATTACGCCTCTGGCTCAAGACATCTTTCAGAATCCACCTCAGGTCGTG
GACGTGCTCAACCCTTTTGGGCCACCAGTACGGCGCTTCGCCCAACAGCA
GTTCTTGACTACAGTGCGAAGCGTACAAGCCCTTTTGGTAGAGTGGTTGG
AGGAGGGGCTTGTGAGATGACGGAGGCCTTTCAAGATACGTAGCTGATGG
TGGTTCACCGTGGTTGACGCGCATCCAATAGCATCATCAACCTAGGCGCG
GCCCACTTTTGCTTTCGTGACATCATGTAACGATTGAATAATTAGGGGCG
CTGTCGAATCGAAAGTAAAAATTGTAAATCAGATTGAAATGCAACGCGCA
AGTATACACAAAAAATATTGCGAGGCGGATTAGTAAGAAAGTCAAAAAAC
CGCATTACCCTGGAAATCAATTCCGTAAATCCGATTACCGGTCTTCGATC
GCTTTTGTGAGGCCTCCCTGGTCTCTGCCGGCAGTCATGCGGCTTACCAC
TCCTTTTCTGTTCCCTTGAAAGAACATAAACAGTCGTTAATATTTCCCCC
TTACAGAGTATGAAGCTGCACAAGAGCAGAAATCGATATTTGAATGGACG
GATGAGCTAATGGTTTGTTGAGACGAGACTGGCCGACGTAAAGCGATAAC
AGGCGATGCTTCAACAACGCGTGTGCTGGCAGGTTAACAACTAAATAGGA
CCCACGGAAAGGAAGGGAAAATAAGAGAAGAAGGGTCAGCGTGCCTTGCC
TCAAGACACGGTTGAATCTGCCGTGATGTTGCACATTTATGGCGTGTCAG
CCTCCTGGTGCCTTGCCTGAGGGACACGAGAGGGGAGGCCGAGGATCGCA
GCGACCACCATGACCATCGCATTCCGCGTAATTTATGTCATGTGCGTATC
GGCAGGATCGTATGTGGTGCAGGGACACATGCATAGTTCTGATGGAATTA
TACGCGAAGAAGCGTACCTGTGATCCTCGATACCTTACGTTGGGCATTGG
GGTTAATTTCGAAATCCCAACGTTTAACGAAAGTTTGACGTGATTCTCAC
TGCTTCGCTCTACCCCTTCCCCTGGCATCTGTTGCCTTTTATCGACATTT
CATCAAGCAACAGCACCCAAATGGCGCAAACTTATGATCCTCGTCGCTCG
AATGTCAAGGAAGAGTCGCTCGCAACATTTATAAGGGCCCCCATCACGGG
GGACTTGACTGAAGTGCCCGGGATCGGCAAAGCCGCCGTCTCCGCCTTGT
CATCTGGAGATGATCCAAACGAGAAAATCACCAACACCTACCAACTTATC
GGCAAATATCTTATGTTGAAAGGACCTGACGATGGCGAAAATAAAGTCTC
GTGCGTAGAGCATTGTGACAAGTTCTGGGCTTTTTTGCAAAGCAAGGGTG
TCAATGCCTACCGCTCGGGTATCGTCCAGTGCATTGCAGAAAAGTGTAAC
ATTCTTCTGCCTGGAATCTACGATGACACAGCATTTTCTACCTGAAAATT
AGGCGTAACAGGGGGTACATGCACGCATTGAATCCCATGCAGACGTGTCG
CTTTCGAGTGGGCTGAGACGTGTGTCAAATTTGGACATTCCCATGACTGT
CCATGCATGCAGCCAATTGCCCAAAAGAAAAATAAAAGGATCCATGTCAC
TCATGCTTTTCGAGCCAAAATAGAGTTCAGGGGGTAGATTAGCCTGTACG
ACTTCTTTCA back to topprotein sequence of rna3958 >rna3958-protein ID=rna3958-protein|Name=rna3958|organism=Nannochloropsis gaditana|type=polypeptide|length=315bp
MVCMGRSRSSTDPEVTGAVGLRAYAHVIEPRLLRVMVVDTYIAQASDIRQ
FLEHEVGRDLVPGFVAAFDVVQDGVEALALAHGVPYDAIFLSESLHGITA
EELVSDLFRIGSDAFMVMIVGAQCVRSDSISAAGFTATLLRPVTGSKIAD
ALRALYSPQGLSSHSPRSTESFMRKNPPVNMSSPFTSLTRSARADRVETL
IPPARDLPDWTHFTPRISDIDESYHSLSGDATSFWRPPQILSMAISETLG
HLLLQGGKKVKSENRGYCIGSAWLTPFRLVRGKQASSILHGGQHRVLGDT
AKLICVTFTSDYFAN back to topmRNA from alignment at CM002462.1:509757..510823+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3958 ID=rna3958|Name=rna3958|organism=Nannochloropsis gaditana|type=mRNA|length=1067bp|location=Sequence derived from alignment at CM002462.1:509757..510823+ (Nannochloropsis gaditana)
ATGGTCTGCATGGGAAGATCGCGCTCCTCCACTGATCCTGAAGTCACGGG
AGCAGTCGGACTACGCGCTTATGCTCATGTCATCGAGCCTCGCCTACTAC
GCGTCATGGTCGTGGATACATACATCGCTCAAGCCAGCGATATAAGACAA
TTTTTGGAGCACGAGGTAGGGCGTGATTTGGTTCCTGGGTTCGTGGCAGC
ATTTGATGTCGTGCAAGATGGTGTGGAGGCACTCGCTCTGGCCCATGGAG
TCCCGTACGATGCAATTTTCCTTTCAGAAAGTTTGCACGGCATCACGGCA
GAAGAGCTCGTCTCAGACTTGTTTCGAATCGGATCAGATGCTTTTATGGT
TATGATCGTTGGGGCTCAATGTGTGAGATCAGATTCTATATCTGCGGCTG
GCTTCACCGCCACCTTGTTGCGACCTGTAACGGGTTCGAAGATAGCAGAT
GCGCTTCGAGCCCTGTACTCACCGCAAGGACTGTCGAGTCATTCCCCTAG
ATCGACCGAATCCTTCATGAGGAAAAATCCGCCTGTAAACATGAGTTCGC
CTTTCACAAGCTTGACAAGGTCGGCGCGGGCTGATAGGGTCGAGACACTC
ATCCCTCCTGCAAGGGATCTGCCAGACTGGACTCATTTTACTCCACGAAT
CTCTGACATAGATGAGTCTTATCACTCCCTGAGCGGTGATGCCACCAGCT
TTTGGAGACCTCCACAAATTTTGTCGATGGCTATAAGTGAGACCCTGGGT
CACCTGCTACtccaaggagggaagaaggtgaaaTCGGAGAATCGGGGGTG
gcgaaagaaaggaaaaaagatgGCAACATGATTTCTGCGGCCTGAAAGCC
AGACAAATGTGACGGGGGAACTTACAGGAGGCTGACATGAATCATACCGC
CAAAACTGTGGCAAAGCTATTGCATAGGATCTGCTTGGCTTACGCCTTTT
CGACTAGTTCGGGGCAAGCAAGCGTCCTCCATCCTGCATGGTGGGCAACA
CCGCGTCTTGGGTGACACTGCGAAGCTTATCTGTGTTACATTCACGTCTG
ACTACTTTGCAAATTGA back to topCoding sequence (CDS) from alignment at CM002462.1:509757..510823+ >rna3958 ID=rna3958|Name=rna3958|organism=Nannochloropsis gaditana|type=CDS|length=1896bp|location=Sequence derived from alignment at CM002462.1:509757..510823+ (Nannochloropsis gaditana)
ATGGTCTGCATGGGAAGATCGCGCTCCTCCACTGATCCTGAAGTCACGGG
AGCAGTCGGACTACGCGCTTATGCTCATGTCATCGAGCCTCGCCTACTAC
GCGTCATGGTCGTGGATACATACATCGCTCAAGCCAGCGATATAAGACAA
TTTTTGGAGCACGAGGTAGGGCGTGATTTGGTTCCTGGGTTCGTGGCAGC
ATTTGATGTCGTGCAAGATGGTGTGGAGGCACTCGCTCTGGCCCATGGAG
TCCCGTACGATGCAATTTTCCTTTCAGAAAGTTTGCACGGCATCACGGCA
GAAGAGCTCGTCTCAGACTTGTTTCGAATCGGATCAGATGCTTTTATGGT
TATGATCGTTGGGGCTCAATGTGTGAGATCAGATTCTATATCTGCGGCTG
GCTTCACCGCCACCTTGTTGCGACCTGTAACGGGTTCGAAGATAGCAGAT
GCGCTTCGAGCCCTGTACTCACCGCAAGGACTGTCGAGTCATTCCCCTAG
ATCGACCGAATCCTTCATGAGGAAAAATCCGCCTGTAAACATGAGTTCGC
CTTTCACAAGCTTGACAAGGTCGGCGCGGGCTGATAGGGTCGAGACACTC
ATCCCTCCTGCAAGGGATCTGCCAGACTGGACTCATTTTACTCCACGAAT
CTCTGACATAGATGAGTCTTATCACTCCCTGAGCGGTGATGCCACCAGCT
TTTGGAGACCTCCACAAATTTTGTCGATGGCTATAAGTGAGACCCTGGGT
CACCTGCTACtccaaggagggaagaaggtgaaaTCGGAGAATCGGGGCTA
TTGCATAGGATCTGCTTGGCTTACGCCTTTTCGACTAGTTCGGGGCAAGC
AAGCGTCCTCCATCCTGCATGGTGGGCAACACCGCGTCTTGGGTGACACT
GCGAAGCTTATCTGTGTTACATTCACGTCTGACTACTTTGCAAATTGAAT
GGTCTGCATGGGAAGATCGCGCTCCTCCACTGATCCTGAAGTCACGGGAG
CAGTCGGACTACGCGCTTATGCTCATGTCATCGAGCCTCGCCTACTACGC
GTCATGGTCGTGGATACATACATCGCTCAAGCCAGCGATATAAGACAATT
TTTGGAGCACGAGGTAGGGCGTGATTTGGTTCCTGGGTTCGTGGCAGCAT
TTGATGTCGTGCAAGATGGTGTGGAGGCACTCGCTCTGGCCCATGGAGTC
CCGTACGATGCAATTTTCCTTTCAGAAAGTTTGCACGGCATCACGGCAGA
AGAGCTCGTCTCAGACTTGTTTCGAATCGGATCAGATGCTTTTATGGTTA
TGATCGTTGGGGCTCAATGTGTGAGATCAGATTCTATATCTGCGGCTGGC
TTCACCGCCACCTTGTTGCGACCTGTAACGGGTTCGAAGATAGCAGATGC
GCTTCGAGCCCTGTACTCACCGCAAGGACTGTCGAGTCATTCCCCTAGAT
CGACCGAATCCTTCATGAGGAAAAATCCGCCTGTAAACATGAGTTCGCCT
TTCACAAGCTTGACAAGGTCGGCGCGGGCTGATAGGGTCGAGACACTCAT
CCCTCCTGCAAGGGATCTGCCAGACTGGACTCATTTTACTCCACGAATCT
CTGACATAGATGAGTCTTATCACTCCCTGAGCGGTGATGCCACCAGCTTT
TGGAGACCTCCACAAATTTTGTCGATGGCTATAAGTGAGACCCTGGGTCA
CCTGCTACtccaaggagggaagaaggtgaaaTCGGAGAATCGGGGCTATT
GCATAGGATCTGCTTGGCTTACGCCTTTTCGACTAGTTCGGGGCAAGCAA
GCGTCCTCCATCCTGCATGGTGGGCAACACCGCGTCTTGGGTGACACTGC
GAAGCTTATCTGTGTTACATTCACGTCTGACTACTTTGCAAATTGA back to top
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