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Properties
| Property Name | Value |
|---|
| Product | protein mam3 |
| Orig transcript id | gnl|cribi|Naga_100001g169.8148.mrna |
| Orig protein id | gnl|cribi|Naga_100001g169.8148 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:496257..499338 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3953 ID=rna3953|Name=rna3953|organism=Nannochloropsis gaditana|type=mRNA|length=1547bp
GGGGGTGTGTTCGCTATGATGCAGACACGCATAACCAAGCTCTTCAAAAT
TCAGCATCCCATTCTGCTGCCAGGGATGTCATGGATATCTCAACCTAAAC
TTGTTGCTGCCGTTTCCAATGCGGGTGGCTTGGGTATCTTAGCGTCCGGG
CCCCTCTCCGCCATCGAGACCGCCGCGGCGATCAAAGAGATCCGCAGACT
GACAGACAACCCATTTGGGATCGGGACAACTCTTATGATGCCAGGGGCGA
AAGAAAATGCAACCGTTGCTTTGGAGGAGGAAGTACCAGTAATCAACTAT
AGCCTAGGGAAAGGAGATTGGCTGGCTGAACGGGCCCATATATATGGCGG
TAAAGTCATTGCCACGGTCACCTCGCTTAAACACGGTACGAACTTTCGAA
GCGAAAACAAGTTAACGGCTCCTTCTTGTTACTTTCTACGATCTTGGACA
AAACATATCTTTGTTAAGGGGCAGAAATGGTGATGGAAGGAATGCCAATT
TTCTGTAAAAGACCTCTACTTTTCCATTTTCTATTCGTTGACCTCAAAAT
ATGGAAAAGCAAAGTCTGCTCGGGCGAGTGGCGCGGACGCTTTGTTAGTA
ACAGGCCATGAGGCTGCAGCTCACGGCGGGGACGTCACATCCCTGGTGCT
TGTCCCGGTTATCGCCTCCAATATGCCGGACCTACCTCTCGTGGCGGCGG
GCGGCTTCGGTGACGGCCGAGGATTGCTGGCGGCGCTTTCTCTCGGTGCG
GACGCGGTCGCCATGGGCACGCGTTTTGCGTGTACCAAGGAAAGCCCCCT
TCACGAGAATGTCAAGGGGGCTATCTCGAGCCCTGAGAAGACGGAAAATG
ACACCGTGTACTCAAAAAATATCGATGGAATTTCTGCCCGCGTTCTGAAA
ACCCCTTTCGCCGCCCAGACAGCTGTCAGTCGCCCCAATCCGTTGCGGGT
TTTGATAGAAGCATTAAAGCAGGCCAAGCAGTTCGGAGTGAACCCTGTGA
AGATACTACCCGGCTATTTTTGGGAGCCGGACAAAATTTATATGCTTGCT
CAATTCGGAGGAGCAACTCGAAAATTCGAGCTCGCAACGGTCCAGGGAGA
TTTGGAAAAGGGGATACAATTTGTGGGACAAATTCAAGGCCTTGTGAATG
ATGTGCCCACAGTACATGAACTTGTAAAAAGAGTGCTCTCAGAGGCGGCA
CGGCTTCACGAAAGGCAGCAAATGAACTTTTTCCGAGAAAGGAAATGATG
GAATAGAAGAAAGGTGCAGAATATTCAAATATAGGCGACAATGTTCCGAA
GATTGCTACCAGCAGCTTAAATGGGCCTCCAAGTAATAGTCACGTGCGAT
TGCCAAATAAAACTGCATATATTTTCCAAGTGGCTGTATGCATTTTTTGG
ACAGCTGATATGTGCGCGGGCATGTACACTGACGTTCTATTGTTGAGGTA
CTTTTGTCGGTGATATGAAGGCAAATATCAGTGTCCAGTTCAGCTTTCGT
GACATATTATTCCATTAAGTTGCGAACCAAATTTTAATATTTCGAGC back to topprotein sequence of rna3953 >rna3953-protein ID=rna3953-protein|Name=rna3953|organism=Nannochloropsis gaditana|type=polypeptide|length=565bp
MDFGDDNAGYADMRDIGSWYQLGGAVVCVICAAFAAGLTVGLMSLDPLEL
EVKRRVGTPEERKHAEKICPLIAPHHRLLVTLLLFNSIANEALPIFLSGL
VPGYVAVLLSVTAILIFGEIIPSAIFTGPNQIIMAAHFSGFVYFLMGVFW
PIAYPIGKVLDKWLGHNSFKRYTREELSTLVDLQREVGVVKHRRPPGSHS
GSGGGGGTLKAAKEKELGESMRAITVDEATIVAGVLKCHAKKICDALKPM
DVVYTLCEEDILDENKLCEIMACGYSRIPVHSARGRQDIRGFLLVKRLIV
LDPADRRPVRTLPLRQPIVVSPTGSLLELINVFQEGRSHMAIVSPCPDLT
RQALRSNKPLEGRIAPIGIITLEDLFEEILQEEIYDEHDDRERKAIETLR
RVRRKVRRLHQQQQHKQQGPQQQAFSGSGHLSASSSTSSSVLMNQSPDSS
PASSTMSSGGLSPTTTATFLLLNSDTPSLLPVSHRVSACPSQNDPSTGLL
SGGPKNDSTHIPGDGKTEMKSATRRKKNGEHKEKPFSCSSTIANGLVKMQ
SPTSYGSTDMGDSLV back to topmRNA from alignment at CM002462.1:496257..499338- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3953 ID=rna3953|Name=rna3953|organism=Nannochloropsis gaditana|type=mRNA|length=3082bp|location=Sequence derived from alignment at CM002462.1:496257..499338- (Nannochloropsis gaditana)
GTCGGGCTCCAACTAAGGCCGACAACGGCCGGTGACAGGAGATGCGCCCT
CGGGGAAATCGACCCGGGCCTTGAATGTGTCTCCGGTCCCTAGAACAAGT
AAGTGCATTACACCGTATCAGAATACCCCACACGCCAACGATGCCAGCGT
GCAAGCGCCAAGTCGAAAGCCGGGGACGTGTGCGTCCGTCCCTATCACTA
GAAAAGCGTTTGACGAACGAAAATTGAGACGTCATGTCAGACGTGATTCA
GTGGACCAGTCGACACCAGACTTTCACGTTGTACATCTCAGACGATAGAC
AAGAAAGCCAAGCACATGTGTAAATATTGCGAGGTATCCTGTTGAAATAG
TCAATATGTATACATAGAGAGAGTGTGAAGAGACGAGTGGTTATAAGCTT
TCCACCACGATACCTCCATCATAGCTTTGCGTCTTCACGTTGCCTACTAT
CCTCATAAACTCTCACATCATTTTCTCCTGGCATCATGGTAAATCGTTGG
GAAAGGCAGCTTTTTTGGTTCTGGCGAAAATTTGGTCGAGTCGACCTGAT
GTTTGTCAAACTCATCTTTCGCTGGGGGACAGACACCCGTTTTCAAATTT
CCTCCCTCACACCTCTTGATCCCAACTGCGTAGGTTCTAGTCCACAGAGC
GTTGCACACTTCTGGGTGAATGGACTTTGGCGATGATAATGCAGGTTATG
CAGATATGCGTGACATCGGCTCTTGGTATCAGTTGGGGGGGGCCGTGGTC
TGTGTGATATGTGCAGCTTTCGCGGCGGGCCTCACTGTGGGACTCATGTC
CCTAGACCCGCTTGAATTGGAAGTCAAACGTCGTGTTGGAACGCCAGAGG
AACGCAAGCATGCAGAGAAAATTTGCCCTTTAATTGCTCCGCACCATCGG
CTTCTCGTCACCCTCCTGCTTTTCAATTCCATAGCTAATGAAGCCCTACC
CATTTTCCTGTCGGGCCTGGTTCCTGGCTACGTTGCTGTCTTGCTGTCTG
TAACAGCCATTCTCATCTTTGGTGAAATCATCCCGTCAGCCATCTTTACG
GGGCCAAATCAAATAATTATGGCGGCGCATTTCTCAGGGTTTGTCTACTT
TTTAATGGGCGTCTTCTGGCCTATCGCGTACCCCATTGGAAAAGTGCTAG
ACAAGTGGTTGGGCCATAACTCTTTTAAGCGCTATACGCGAGAGGAGCTA
TCTACGCTGGTAGACCTCCAGCGAGAAGTAGGGGTGGTGAAGCATCGTCG
GCCTCCGGGATCTCATTCCGGCAGCGGGGGTGGTGGTGGGACTCTGAAGG
CGGCGAAAGAGAAGGAGTTAGGAGAAAGCATGCGCGCGATTACGGTAGAC
GAGGCGACAATTGTAGCGGGGGTGCTCAAATGCCATGCTAAAAAGATTTG
CGATGCTTTAAAGCCGATGGATGTCGTGTACACCTTGTGTGAAGAAGATA
TTCTGGACGAGAACAAGCTCTGCGAGATCATGGCGTGCGGCTACTCACGT
ATCCCAGTGCACAGTGCACGTGGCCGTCAAGACATCCGAGGCTTTCTTCT
GGTGAAGAGACTGATTGTTCTTGATCCAGCCGATCGTCGCCCGGTCCGTA
CTTTGCCTTTGCGGCAACCCATCGTTGTATCGCCCACCGGGTCCCTCCTT
GAGCTGATCAACGTTTTTCAAGAAGGCAGGAGTCACATGGCTATCGTTTC
TCCTTGTCCAGACCTTACGCGGCAGGCCCTTCGATCAAATAAACCTCTGG
AGGGGAGGATCGCGCCCATAGGAATAATTACGTTGGAGGACTTATTCGAA
GAAATCTTGCAAGAGGAGATCTACGATGAACATGATGATCGGGTGAGTAG
GCTGGTCTCGAGACTGTTTTCTTGTCATTCTTTGTCTTTGCCATGCTACT
CGATTAAGAGCGATTGTATTCTCATACCTTTGGATCAATAATGATTAATA
ATCATTCACCTGTTCTCTCTTTCCGCCACTTCAGGAGAGGAAGGCGATTG
AGACTTTACGGCGTGTACGACGAAAAGTTCGTCGTCTTCATCAGCAGCAG
CAGCACAAGCAGCAAGGGCCACAGCAACAGGCATTCAGTGGAAGCGGGCA
CTTAAGTGCGAGCAGTAGTACAAGCAGCAGCGTCTTAATGAACCAGTCAC
CGGATTCATCCCCTGCTTCCTCGACAATGTCCAGTGGCGGGCTTTCGCCC
ACTACCACTGCCACATTCCTGCTGTTGAATAGCGATACACCCTCTCTATT
GCCTGTTTCGCATCGAGTGTCTGCATGCCCATCACAAAATGACCCATCAA
CAGGCCTTCTGTCGGGTGGGCCAAAAAATGATAGCACACATATACCCGGA
GATGGGAAAACTGAGATGAAATCAGCCACGAGGAGAAAGAAAAATGGAGA
ACATAAAGAAAAGCCATTCAGCTGTTCTTCCACTATCGCCAACGGTCTCG
TGAAGATGCAGTCTCCGACGTCGTATGGCAGCACCGACATGGGCGACTCC
CTTGTGTAGAGAACAAAGAGAAGCATTGCAAGGCACACGAGCGAGCGGTG
GCTAAATCGGTGGAAGTCAGGTCTAAGCTGTATGAGTAATTTTTTTCTGC
TGCTCAAGATGTTCTTGGGTGGGCTCGATGTCTGAAATTTAAAAGACGCA
TGAGTCTTTGCGTTCGGAGTGATAAGCGAAAGAAATAATAAAAATGGGGC
ATTTTGTGTCGGAAATTGACTGCTTTAGGGGCAACGTGTAGTAGCATGGG
CAACACTTAGTACTAAAATCTCGCTTTTCTTGACTTTCAGAAAAGAAGTT
TTCAGAATGTCTGCGCCATACGATTAGTGACAGTATGCCAGATTGGCTCG
CGACCAAAAAGTTGTGATCGACATAAAGTGTGTCATGGAAAAGTTTACAA
CCCTAACCCTAACATTCAGGATACTCATCGTATACCAGTGAGGGTCCGAT
CGTCTTTCAAGGTTTGACGAGAAGTTTTTGAGGAGCAACCTTGACAAGAA
GTCTTTGTAGAATAAAAAAAAGCCTGGATCGTTAACTTTAAGGCCATACA
TAATCGCTGGTCTTTGTTAGTTCCAATGCTCG back to topCoding sequence (CDS) from alignment at CM002462.1:496257..499338- >rna3953 ID=rna3953|Name=rna3953|organism=Nannochloropsis gaditana|type=CDS|length=3396bp|location=Sequence derived from alignment at CM002462.1:496257..499338- (Nannochloropsis gaditana)
GAGAGGAAGGCGATTGAGACTTTACGGCGTGTACGACGAAAAGTTCGTCG
TCTTCATCAGCAGCAGCAGCACAAGCAGCAAGGGCCACAGCAACAGGCAT
TCAGTGGAAGCGGGCACTTAAGTGCGAGCAGTAGTACAAGCAGCAGCGTC
TTAATGAACCAGTCACCGGATTCATCCCCTGCTTCCTCGACAATGTCCAG
TGGCGGGCTTTCGCCCACTACCACTGCCACATTCCTGCTGTTGAATAGCG
ATACACCCTCTCTATTGCCTGTTTCGCATCGAGTGTCTGCATGCCCATCA
CAAAATGACCCATCAACAGGCCTTCTGTCGGGTGGGCCAAAAAATGATAG
CACACATATACCCGGAGATGGGAAAACTGAGATGAAATCAGCCACGAGGA
GAAAGAAAAATGGAGAACATAAAGAAAAGCCATTCAGCTGTTCTTCCACT
ATCGCCAACGGTCTCGTGAAGATGCAGTCTCCGACGTCGTATGGCAGCAC
CGACATGGGCGACTCCCTTGTGTAGATGGACTTTGGCGATGATAATGCAG
GTTATGCAGATATGCGTGACATCGGCTCTTGGTATCAGTTGGGGGGGGCC
GTGGTCTGTGTGATATGTGCAGCTTTCGCGGCGGGCCTCACTGTGGGACT
CATGTCCCTAGACCCGCTTGAATTGGAAGTCAAACGTCGTGTTGGAACGC
CAGAGGAACGCAAGCATGCAGAGAAAATTTGCCCTTTAATTGCTCCGCAC
CATCGGCTTCTCGTCACCCTCCTGCTTTTCAATTCCATAGCTAATGAAGC
CCTACCCATTTTCCTGTCGGGCCTGGTTCCTGGCTACGTTGCTGTCTTGC
TGTCTGTAACAGCCATTCTCATCTTTGGTGAAATCATCCCGTCAGCCATC
TTTACGGGGCCAAATCAAATAATTATGGCGGCGCATTTCTCAGGGTTTGT
CTACTTTTTAATGGGCGTCTTCTGGCCTATCGCGTACCCCATTGGAAAAG
TGCTAGACAAGTGGTTGGGCCATAACTCTTTTAAGCGCTATACGCGAGAG
GAGCTATCTACGCTGGTAGACCTCCAGCGAGAAGTAGGGGTGGTGAAGCA
TCGTCGGCCTCCGGGATCTCATTCCGGCAGCGGGGGTGGTGGTGGGACTC
TGAAGGCGGCGAAAGAGAAGGAGTTAGGAGAAAGCATGCGCGCGATTACG
GTAGACGAGGCGACAATTGTAGCGGGGGTGCTCAAATGCCATGCTAAAAA
GATTTGCGATGCTTTAAAGCCGATGGATGTCGTGTACACCTTGTGTGAAG
AAGATATTCTGGACGAGAACAAGCTCTGCGAGATCATGGCGTGCGGCTAC
TCACGTATCCCAGTGCACAGTGCACGTGGCCGTCAAGACATCCGAGGCTT
TCTTCTGGTGAAGAGACTGATTGTTCTTGATCCAGCCGATCGTCGCCCGG
TCCGTACTTTGCCTTTGCGGCAACCCATCGTTGTATCGCCCACCGGGTCC
CTCCTTGAGCTGATCAACGTTTTTCAAGAAGGCAGGAGTCACATGGCTAT
CGTTTCTCCTTGTCCAGACCTTACGCGGCAGGCCCTTCGATCAAATAAAC
CTCTGGAGGGGAGGATCGCGCCCATAGGAATAATTACGTTGGAGGACTTA
TTCGAAGAAATCTTGCAAGAGGAGATCTACGATGAACATGATGATCGGGA
GAGGAAGGCGATTGAGACTTTACGGCGTGTACGACGAAAAGTTCGTCGTC
TTCATCAGCAGCAGCAGCACAAGCAGCAAGGGCCACAGCAACAGGCATTC
AGTGGAAGCGGGCACTTAAGTGCGAGCAGTAGTACAAGCAGCAGCGTCTT
AATGAACCAGTCACCGGATTCATCCCCTGCTTCCTCGACAATGTCCAGTG
GCGGGCTTTCGCCCACTACCACTGCCACATTCCTGCTGTTGAATAGCGAT
ACACCCTCTCTATTGCCTGTTTCGCATCGAGTGTCTGCATGCCCATCACA
AAATGACCCATCAACAGGCCTTCTGTCGGGTGGGCCAAAAAATGATAGCA
CACATATACCCGGAGATGGGAAAACTGAGATGAAATCAGCCACGAGGAGA
AAGAAAAATGGAGAACATAAAGAAAAGCCATTCAGCTGTTCTTCCACTAT
CGCCAACGGTCTCGTGAAGATGCAGTCTCCGACGTCGTATGGCAGCACCG
ACATGGGCGACTCCCTTGTGTAGATGGACTTTGGCGATGATAATGCAGGT
TATGCAGATATGCGTGACATCGGCTCTTGGTATCAGTTGGGGGGGGCCGT
GGTCTGTGTGATATGTGCAGCTTTCGCGGCGGGCCTCACTGTGGGACTCA
TGTCCCTAGACCCGCTTGAATTGGAAGTCAAACGTCGTGTTGGAACGCCA
GAGGAACGCAAGCATGCAGAGAAAATTTGCCCTTTAATTGCTCCGCACCA
TCGGCTTCTCGTCACCCTCCTGCTTTTCAATTCCATAGCTAATGAAGCCC
TACCCATTTTCCTGTCGGGCCTGGTTCCTGGCTACGTTGCTGTCTTGCTG
TCTGTAACAGCCATTCTCATCTTTGGTGAAATCATCCCGTCAGCCATCTT
TACGGGGCCAAATCAAATAATTATGGCGGCGCATTTCTCAGGGTTTGTCT
ACTTTTTAATGGGCGTCTTCTGGCCTATCGCGTACCCCATTGGAAAAGTG
CTAGACAAGTGGTTGGGCCATAACTCTTTTAAGCGCTATACGCGAGAGGA
GCTATCTACGCTGGTAGACCTCCAGCGAGAAGTAGGGGTGGTGAAGCATC
GTCGGCCTCCGGGATCTCATTCCGGCAGCGGGGGTGGTGGTGGGACTCTG
AAGGCGGCGAAAGAGAAGGAGTTAGGAGAAAGCATGCGCGCGATTACGGT
AGACGAGGCGACAATTGTAGCGGGGGTGCTCAAATGCCATGCTAAAAAGA
TTTGCGATGCTTTAAAGCCGATGGATGTCGTGTACACCTTGTGTGAAGAA
GATATTCTGGACGAGAACAAGCTCTGCGAGATCATGGCGTGCGGCTACTC
ACGTATCCCAGTGCACAGTGCACGTGGCCGTCAAGACATCCGAGGCTTTC
TTCTGGTGAAGAGACTGATTGTTCTTGATCCAGCCGATCGTCGCCCGGTC
CGTACTTTGCCTTTGCGGCAACCCATCGTTGTATCGCCCACCGGGTCCCT
CCTTGAGCTGATCAACGTTTTTCAAGAAGGCAGGAGTCACATGGCTATCG
TTTCTCCTTGTCCAGACCTTACGCGGCAGGCCCTTCGATCAAATAAACCT
CTGGAGGGGAGGATCGCGCCCATAGGAATAATTACGTTGGAGGACTTATT
CGAAGAAATCTTGCAAGAGGAGATCTACGATGAACATGATGATCGG back to top
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