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Properties
| Property Name | Value |
|---|
| Product | amidohydrolase 2 |
| Orig transcript id | gnl|cribi|Naga_100001g186.8135.mrna |
| Orig protein id | gnl|cribi|Naga_100001g186.8135 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:455505..457212 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3937 ID=rna3937|Name=rna3937|organism=Nannochloropsis gaditana|type=mRNA|length=3621bp
ATGCACACAGATGCGGAGGAATCTTTCTCATTGGCCTCATTGGGTCGGGC
TTTAAGCCGCAGGCTTGGCAGTCACCGTACAGAAGCAGACTCAGAGCATC
GACACGTAGTTGTAGGGGATGAGGAGACAACGCACGCCAAGCTTCAGAAT
GAGCCATGGCGTCCAGGTCCCCCGCACACGGGACCAGGCATTTCGACGAA
CGAGGTCGTCACATCCATGTATACGATCTACTCATTCGTCCCACAAAATT
TATGGAGACAAATGCATCGAGCAGCAAACGTATACTTCCTTTTTATATCG
ATTCTGCAAACCATCAAAGCTGTGAGCATAACCTCGGGAGTCCCTACTAC
TGCCCTCCCCCTGAGTTTTGTCCTTTTTGTGACGGCTGTGAAAGACGCAA
TCGAGGACTTCAATCGGCACCGAGCTGATGCGGTAGAGAACAACCGAACA
AGTTACCTCTTAACACAAGAGAAGGGCTGGGATCTGCACCATGCCCATCC
TCGCAAGTGGCAAGACATCAAGGTCGGCGATGTAGTTGTCATCAAGAATC
GCGATCCCATCCCAGCTGACATCATCCTGCTGTCATCTGCGGAGCCAAGT
GGACTAGCTTTTGTTATGACTGCGAACTTGGATGGAGAGACCAATCTCAA
AGCGAAGGAGGTTCATAAGGACTTTCGAAATCTGTCCTTGTCAGCCAAAC
TCGATGGAGCAGAGGTGGTGTGCGACTTACCAAATAACAGTCTCGAGCAT
TTCGAAGGCCTTTACTCTTTTCAGAAGGACACCGGTGAGCAGAAGATCCC
CTTAACGGCGCGAAACATTTTATTGCGTGGGTGCGTTCTCCGCAACACGA
CCTGGGCGGTTGGAGTGGTAGTCTATACGGGAAGAGAGAGCAAGATCCAG
ATGAACGCCGCCGAGACCCGACAAAAAGTGGGGAGCGTTCGCAGGTTTGT
GGACCGAGAAACGGTGATGGTGCTCGGCCTACAAGTTACGTGCTGTCTGG
TTGCAGCTATATTGGGCGGGCTCGCCGTGAAGCGAGGCGCACAGACGCCC
TACCTGTGGGAAGGCAGGGAGCTTCCGGACCCCGCTCTCTCGGGCTTAAT
TCAGTTCTTCACCTACACGGTCATATTCTCCAACATGCTACCCATATCAT
TGCTGGTCACGCTGGATATGGTGAAGTTCTTCCAGGGCGTCTTCATGACG
TGGGACCTACGCATGTACCACCAGCTGGAGGACGCGGAGGGCCAGCCGGT
CGAGATCCCTTGCCTGGCACGATCCTCCGATTTGAACGAGGAGCTGGGGG
TGATCGAGCACGTATTCTCAGATAAAACAGGGACGCTGACCTGCAACGTG
ATGGAATTCAGCAAGTGCAGCATCGGAGGCGTCCGCTACGGTTTGGGACT
CACGCAAATCGGCCGCGCCTTCCGCGAGCGCAACAACCTGACCATTGTGG
AACCGCCGCCACGGGACCCGACGGAGGCGATCACCCCCTTTGTGAACATA
AACGACCCCGCCTTGGTGGCCGTGATGAAGAACGAGAGGGACCCCCAGCA
CGCCAAGTGCCTGGACTTCTGGCTCGCCCTGGCCCTGAATCACGACGTGA
TGCCGGAGAGGCACGGGCACTCCTTGGTGTATAGCGGCTCTAGCCCCGAT
GAGACCGCTCTTGTCTACGCAGCGAAGCACCATGGCTTCTTTTTCACGGC
GCGGGAGCCGGGCAAGGTAACGGTCAGGATCAAAGGCCGGGCGGTGGAAT
TCAACGTCCTGCACGTCCTCGAGTTCACTTCAGATCGGAAGAAGTCTTCG
GTGGTCCTTCGCCGCGAGGACGGAGTGATCGTGCTCTACTGCAAGGGTGC
TGATAACGTCATCAAATCTCGGCTGAGCGAGTCCCTCAACTCGAGAGAGG
AGCTGGCGCAGATCGACGCGGATGTGGCCCAGTACGCGGATGACGGCCTG
CGCACCTTGCTCTTGGCGAAGGCAGAGCTTCAAGAAAGCCAGTACCGGGA
ATGGGAAAAGCGTTATCACGAAGCGGAGACCAGCTTCAAGGATCGCGATG
AGAAACGGTACGCGCTCATGGAGGAGCTGGAACGGGAGCTGGTGGTGATG
GGAGTGACGGCTATTGAGGACAAGCTGCAAGACGGAGTGCCCGAGACGAT
CCACTCCTTGCGATGCGCGGGGATCAAGGTCTGGGTCTTGACGGGGGACA
AGGTGGACACTGCGATAAACATCGCTCACAGTTGCCAGCTCCTGTCAACC
GAAATGAGGCTTCTGAGGCTTTGTGGGGAAGACGGCGAGCTGCCGCTTGA
CAAGGAGAAGGTCCCCTTCAAGACGGGCATGGAAGAGAAGCTGCGGGCCT
TGATCCAGGTCGCAACGACGACGGAAACGTCCTACTTCGCCAAAAATCTA
GTTCCCTCCCAGCAGGCCTTGGTCATCGACACCTACGCCTTGTCAGCCAT
ACTGAAATACGAGCTCCAGGACCTTATGCTCGTGCTATGTCGCTCGTGCG
TTTCGGTCATTTGCGCGCGTGTCTCCCCGCGCCAGAAGGCGATGGTCGTG
GAGATGGTGAAAAAAGCTGACCCCCGTGCGCAGACCCTTTCGATCGGCGA
TGGGGCTAACGACGTGCCCATGTTGCAGGCCGCGCACGTGGGGGTGGGCA
TCTTTGGGCTAGAGGGCCAGCAGGCTGTGAACAATAGCGACTACTCCATC
GGACAGTTCCGTTTCCTTCGCAATCTTCTCTTTGTGCACGGCCGTTTTAA
TTATCGGCGCATAGCCACAATTGTAAAATACATATTCTACAAGAGTGCCG
TGCTGGTGCTGCCCCAATTTTTCTACGGCACAGTGTCTCTGTTTTCCGGT
CAGCCAATCTACGAAGATATCATTTATCAGCTCGCTAATGTATTGTTCAC
GGCCACTCCCATCATTGCCTTGGGAGTTCTCGACCGTGACGTTCCTGTGG
ACAGTGCTTTGAGCATCCCTGCCTTGTACAGGGATGGCATTGAGCGGAGA
TTTCTCAATCGCAGCGTCTTCGTAGCATGGATGATGGAAGCCATCGTGCA
TGCCATCCTGATCCTCTTTTTGCCTTTGCTATCTTTCGGGTATTTCAATA
TCTTGCCTTCGGGCAAAGCTGTGAGCATCTGGGAGCTAGGCACGATTGTA
TTCCTGTCGTTCTTGACTGTCGTTTCGCTCCGCTTGGCCGTAGAGGTACT
AGAATGGCAAATCGTCATCACTTCGCTCATCCTCCTATCCATTGCCTTGT
GGTGGATGAGTTGGGTGGTGCTCAACTTCTGGCTCGCAGTGGCTCCGGAC
ATCTATGGGTCGATATCGGTCTTTCCGGAGAGTAGCCGATTCTGGTTCAC
CTATCTTTTGGCCACGACGGCTTGCTTTGCGATCACTTTCGCGGTTGAGT
CAGGGTCTGTGGTCTTCGCGCCTACTCGGAGTCAGGTCTTAAGAGAGCGA
CTACACGCACTCGACAGTGTCGACAGAGAGAGAAAAGGGAAGGGGAGGGC
AAGCGGCGATCGAAAGGATACTGCCGAGGGCTCTCATGTTCCGGATACGT
CTAGGGGGAAAAGCATGGCAGCAAATATACCTGTAGAGCAATCACAGGAG
GAAGGGCACATGAGCGGCTAA back to topprotein sequence of rna3937 >rna3937-protein ID=rna3937-protein|Name=rna3937|organism=Nannochloropsis gaditana|type=polypeptide|length=395bp
MAVSQCKHMTASLFGGFYSRRTNVGRVCITIVFLLAYHLLTLFCRMPTTT
PPLPVLDPHFHIWDNKTHPNSNLGELTLKELPVYSFRNYEEDCGVGVSGS
VHVEAIVGQAEGAVDGLDPVAETRFVLEQLGAEGVRNVNLVVFVKLSDMP
RAEAVIEAHRHVAGTRLVGVRMILNHSAEDPSLTWPQVERGDYLTGGSPS
FNEGFALLGPRKLSFDLQVNWFQLQDAATFLQAFPDTVVILDHMGCLKLG
AGEEEDARRITVWQRGMQALAALPNVFVKLSMLEYIRSGWQSDDTGKGEG
DSKSDDTQGDAAGAACTNAHAVVKARVRDTIKWFGPSRCMFASNFPVDKC
LLGRDCRPTSLENLVLAQHALVADLPEEEQRQLFIETARKVYKLK back to topmRNA from alignment at CM002462.1:455505..457212- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3937 ID=rna3937|Name=rna3937|organism=Nannochloropsis gaditana|type=mRNA|length=1708bp|location=Sequence derived from alignment at CM002462.1:455505..457212- (Nannochloropsis gaditana)
GTGTCTCCCTGCGCGCCACCTTTCTTTCGTAAATGATGCAAGGTTTGCTG
TCACTCATAGGTCACTGTGTCTGCTTGTCCGTCACCGCTGACTTTTGAAT
GGCTGTATCTCAGTGCAAGCATATGACCGCAAGTCTGTTTGGCGGCTTTT
ATAGTCGGCGTACGAATGTGGGCAGGGTGTGCATCACGATTGTGTTCTTA
CTCGCCTACCACCTTTTGACGCTTTTTTGCAGGCAAGTGCCAGGGGTGTA
TAGAAAAGTTGCTTCCCCGACTTACTTTCCCATATCAAACTGAGTCGAAC
GTCACACTTCTAAACTGCCGTACGTCGATCCGCTCTCTCGCAGGATGCCT
ACCACGACACCGCCGTTGCCCGTTCTCGACCCACATTTTCACATTTGGGA
TAACAAAACGCACCCGAATTCTAATCTTGGAGAGCTGACGCTTAAGGAGT
TGCCTGTGTACAGCTTCCGTAATTATGAAGAGGACTGTGGGGTAGGTGTG
TCAGGCTCGGTGCATGTAGAAGCTATCGTTGGACAAGCCGAAGGTGCCGT
GGACGGCCTGGACCCGGTGGCAGAGACTCGTTTCGTGCTTGAACAACTCG
GAGCGGAAGGAGTACGGAATGTGAACCTTGTGGTGTTCGTCAAGCTGAGC
GACATGCCAAGGGCAGAAGCAGTCATCGAGGCGCACCGTCACGTAGCGGG
GACCCGTTTGGTGGGCGTCCGCATGATCTTGAACCACTCGGCCGAAGACC
CTAGCCTGACGTGGCCACAAGTAGAGCGTGGAGATTATTTGACCGGAGGG
TCGCCATCGTTTAATGAAGGATTTGCGTTGCTGGGGCCTCGGAAGCTTTC
TTTTGACTTGCAAGTGAACTGGTTTCAGCTGCAAGACGCCGCCACTTTCC
TTCAAGCCTTTCCAGACACAGTCGTGATCCTCGATCATATGGGATGTCTG
AAGCTGGGCGCGGGAGAGGAGGAAGATGCGCGGCGCATAACTGTGTGGCA
ACGAGGGATGCAGGCCCTGGCGGCGCTGCCGAACGTGTTCGTGAAGCTGT
CCATGCTAGAGTACATACGGAGTGGATGGCAAAGTGACGATACGGGAAAA
GGAGAAGGCGATAGTAAGAGCGATGATACTCAAGGTGACGCGGCAGGAGC
AGCCTGTACGAACGCCCACGCTGTCGTCAAAGCGCGGGTCCGCGATACCA
TCAAGTGGTTTGGGCCCTCGAGGTGCATGTTCGCGAGCAACTTTCCTGTG
GATAAATGCCTGTTAGGAAGAGATTGCCGTCCGACTTCTTTGGAAAATCT
GGTGTTGGCCCAGCACGCTTTGGTCGCTGACCTTCCGGAGGAGGAGCAGC
GTCAGTTGTTCATAGAAACGGCAAGAAAGGTCTACAAGCTGAAGTGACAA
GGCGTGGAGCAAAAAGAAATGTCATCGCGAGCAGAATATGATCGAAGGAT
ATAGCGAATAGAAAACGATCTGCTTCGCGCATTTCACATGTAATTTTGCG
AACCATTTACGAAACAAAATAAGACTATTGAGTAGCGCCTCGCATCCAAA
GCTTTGACCCCTAATTTGTAGTGTACAGCCCTTCCCCTAGGCTTGCCATT
TGTATCATCATTTGACAGCTGCTTAGCCGCTCATGTGCCCTTCCTCCTGT
GATTGCTCTACAGGTATATTTGCTGCCATGCTTTTCCCCCTAGACGTATC
CGGAACAT back to topCoding sequence (CDS) from alignment at CM002462.1:455505..457212- >rna3937 ID=rna3937|Name=rna3937|organism=Nannochloropsis gaditana|type=CDS|length=2376bp|location=Sequence derived from alignment at CM002462.1:455505..457212- (Nannochloropsis gaditana)
GATGCCTACCACGACACCGCCGTTGCCCGTTCTCGACCCACATTTTCACA
TTTGGGATAACAAAACGCACCCGAATTCTAATCTTGGAGAGCTGACGCTT
AAGGAGTTGCCTGTGTACAGCTTCCGTAATTATGAAGAGGACTGTGGGGT
AGGTGTGTCAGGCTCGGTGCATGTAGAAGCTATCGTTGGACAAGCCGAAG
GTGCCGTGGACGGCCTGGACCCGGTGGCAGAGACTCGTTTCGTGCTTGAA
CAACTCGGAGCGGAAGGAGTACGGAATGTGAACCTTGTGGTGTTCGTCAA
GCTGAGCGACATGCCAAGGGCAGAAGCAGTCATCGAGGCGCACCGTCACG
TAGCGGGGACCCGTTTGGTGGGCGTCCGCATGATCTTGAACCACTCGGCC
GAAGACCCTAGCCTGACGTGGCCACAAGTAGAGCGTGGAGATTATTTGAC
CGGAGGGTCGCCATCGTTTAATGAAGGATTTGCGTTGCTGGGGCCTCGGA
AGCTTTCTTTTGACTTGCAAGTGAACTGGTTTCAGCTGCAAGACGCCGCC
ACTTTCCTTCAAGCCTTTCCAGACACAGTCGTGATCCTCGATCATATGGG
ATGTCTGAAGCTGGGCGCGGGAGAGGAGGAAGATGCGCGGCGCATAACTG
TGTGGCAACGAGGGATGCAGGCCCTGGCGGCGCTGCCGAACGTGTTCGTG
AAGCTGTCCATGCTAGAGTACATACGGAGTGGATGGCAAAGTGACGATAC
GGGAAAAGGAGAAGGCGATAGTAAGAGCGATGATACTCAAGGTGACGCGG
CAGGAGCAGCCTGTACGAACGCCCACGCTGTCGTCAAAGCGCGGGTCCGC
GATACCATCAAGTGGTTTGGGCCCTCGAGGTGCATGTTCGCGAGCAACTT
TCCTGTGGATAAATGCCTGTTAGGAAGAGATTGCCGTCCGACTTCTTTGG
AAAATCTGGTGTTGGCCCAGCACGCTTTGGTCGCTGACCTTCCGGAGGAG
GAGCAGCGTCAGTTGTTCATAGAAACGGCAAGAAAGGTCTACAAGCTGAA
GTGAATGGCTGTATCTCAGTGCAAGCATATGACCGCAAGTCTGTTTGGCG
GCTTTTATAGTCGGCGTACGAATGTGGGCAGGGTGTGCATCACGATTGTG
TTCTTACTCGCCTACCACCTTTTGACGCTTTTTTGCAGGATGCCTACCAC
GACACCGCCGTTGCCCGTTCTCGACCCACATTTTCACATTTGGGATAACA
AAACGCACCCGAATTCTAATCTTGGAGAGCTGACGCTTAAGGAGTTGCCT
GTGTACAGCTTCCGTAATTATGAAGAGGACTGTGGGGTAGGTGTGTCAGG
CTCGGTGCATGTAGAAGCTATCGTTGGACAAGCCGAAGGTGCCGTGGACG
GCCTGGACCCGGTGGCAGAGACTCGTTTCGTGCTTGAACAACTCGGAGCG
GAAGGAGTACGGAATGTGAACCTTGTGGTGTTCGTCAAGCTGAGCGACAT
GCCAAGGGCAGAAGCAGTCATCGAGGCGCACCGTCACGTAGCGGGGACCC
GTTTGGTGGGCGTCCGCATGATCTTGAACCACTCGGCCGAAGACCCTAGC
CTGACGTGGCCACAAGTAGAGCGTGGAGATTATTTGACCGGAGGGTCGCC
ATCGTTTAATGAAGGATTTGCGTTGCTGGGGCCTCGGAAGCTTTCTTTTG
ACTTGCAAGTGAACTGGTTTCAGCTGCAAGACGCCGCCACTTTCCTTCAA
GCCTTTCCAGACACAGTCGTGATCCTCGATCATATGGGATGTCTGAAGCT
GGGCGCGGGAGAGGAGGAAGATGCGCGGCGCATAACTGTGTGGCAACGAG
GGATGCAGGCCCTGGCGGCGCTGCCGAACGTGTTCGTGAAGCTGTCCATG
CTAGAGTACATACGGAGTGGATGGCAAAGTGACGATACGGGAAAAGGAGA
AGGCGATAGTAAGAGCGATGATACTCAAGGTGACGCGGCAGGAGCAGCCT
GTACGAACGCCCACGCTGTCGTCAAAGCGCGGGTCCGCGATACCATCAAG
TGGTTTGGGCCCTCGAGGTGCATGTTCGCGAGCAACTTTCCTGTGGATAA
ATGCCTGTTAGGAAGAGATTGCCGTCCGACTTCTTTGGAAAATCTGGTGT
TGGCCCAGCACGCTTTGGTCGCTGACCTTCCGGAGGAGGAGCAGCGTCAG
TTGTTCATAGAAACGGCAAGAAAGGTCTACAAGCTGAAGTGAATGGCTGT
ATCTCAGTGCAAGCATATGACCGCAAGTCTGTTTGGCGGCTTTTATAGTC
GGCGTACGAATGTGGGCAGGGTGTGCATCACGATTGTGTTCTTACTCGCC
TACCACCTTTTGACGCTTTTTTGCAG back to top
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