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Properties
| Property Name | Value |
|---|
| Product | protein myg1 |
| Orig transcript id | gnl|cribi|Naga_100001g188.8167.mrna |
| Orig protein id | gnl|cribi|Naga_100001g188.8167 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:450398..451498 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3935 ID=rna3935|Name=rna3935|organism=Nannochloropsis gaditana|type=mRNA|length=1321bp
GACCTGAATGGAAGTAGCTTGGCCGGCGAGCAAAAGAAAGTGACCGAGAC
CGTCCACTCCCAGCGGCCTGCTAGCTTTTGGCGAACCATGCTTCTCCCAC
GCGTCCTCGCATGTTTTATTGCGGAGGTGAGCCAACTGCAGGGGCAATAT
TTCCTTCACGCGAGCAAACAGCTATTATGATGTTGATGAGTGGACAATCT
GGATTACTAACACTTCCTTTCATGTCTACTACGTGGTACATGTAACGCCC
GACCAACCTCCCCCCCTCTCGGCGTGTTTACAGGACCAGACGCAATAGAT
CATAGAGCCCCACCGCTAGAATTACACCCACCATGTTTGCCACCACGATG
ACCCGTTGTCTGCGACGGGCTGCTGGAATTCGCGCCTTCTCATCCTCCAT
GGGAAGGACTACAGCCTTCACTGCGAAGCGCGCTTCCTACCGCGTGCTTG
GTGGCCTAGCCCTCTTCGCGGCGGGGACTGTCTGGGCCGCTCAGGGGGCT
CACTTTGATACCCCCACGCTCTGCTCAGCTGGCAAGGCGCCCTTCACAGG
CGTACCGGGGACCGATAAGGAGCGCACCTTCATCGCCATCAAGCCTGATG
GTGTGCAGCGGGGCTTGATCGCGGCCATCATTGCTCGCTTTGAGAACAAA
GGCTTCAAGCTGGTGGCGTTAAAAATGCTGTGGCCCACAAAGGAGAAGGC
AGAAAGCCACTATGCTGATCTAGCCACCAAGCCCTTCTTTAAGGGGCTCG
TTGCCTACTTCTCCTCCGGCCCCATCGTGGCCATGGTCTGGGAGGGCAAG
GACGCCATCAAGACCGGCCGCGTCCTCCTCGGGGCCACCAACCCCGCCGC
CGCCGTCCCGGGGACCATCCGCGGGGACCTGGCCATCAGCGTGGGCCGCA
ACATCTGTCACGGCTCGGACGGTCCCGAGTCGGCCGTGCACGAAATCGCG
AACTGGTTCACGCCCGAGGAGGTTTCGGACTACCCGCGCAGCCTGGACGA
ATGGATCGTGTCCGACAACTAGGGGGGGCAGAGAGAGAAGAAGGCGCGCT
TGCGCGTACACCTTGCCTAGTGGGGCGATCAGTGGCTAGGCCGGTTCGCA
TGCAGTACCCTGGTGCGCGCTCTGGAACGTATAGGGAGGAGGATAGGGTG
GCAGCGAGGTGGCGGGACCCTTTGGAATGGAAAAGGTGGGACAAAAACGG
GGATGACCGTTTGTGTGTTTCAAGGCCCCTTCCTGCTGGACTCTGCCAGA
CTTGCATAAGCTTCAAACCAGAAAAAATGCAGTAGCATCGAAAAAGTTCA
GACCCACACCGCCTTCCCTGC back to topprotein sequence of rna3935 >rna3935-protein ID=rna3935-protein|Name=rna3935|organism=Nannochloropsis gaditana|type=polypeptide|length=366bp
METDYSLSVQEASLKHPSDASSSPVIVSEVPTGVSCPIIGTHDGTFHCDE
VLAISMLRLLPTYHNAVVVRTRDKAKLAQCTIVLDVGGEYDAVRLRFDHH
QRGFDETLGEGYKTKLSSAGLVYKHFGKDMLRHLIATSVAPTQMSSACIE
NMVEKLFTKTYFDFIEHIDGIDNGIDVAESDLRYKIQTHLPGRVAKLNSA
WNQDGSADSLNTRFSRALSMVTAEFVDTFMYLCNSWWPARRIVAQAFEER
NAVHPSGKVLHLSSYCPWQDHLFELEQEVGLPGHILYVLYGDPKGSSVRI
HAVPEKIGSFLLRAPLPEPWRGLRDEMLDDAVGGVQGCTFVHANGFIGGN
KTLNGAMKMVNKALSP back to topmRNA from alignment at CM002462.1:450398..451498+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3935 ID=rna3935|Name=rna3935|organism=Nannochloropsis gaditana|type=mRNA|length=1101bp|location=Sequence derived from alignment at CM002462.1:450398..451498+ (Nannochloropsis gaditana)
ATGGAGACAGATTATTCGTTGTCAGTCCAGGAAGCCTCTCTGAAACATCC
TTCCGACGCCTCGTCCTCACCCGTGATAGTCTCAGAAGTGCCGACGGGGG
TGAGCTGTCCGATCATAGGCACGCACGACGGGACCTTCCACTGCGATGAA
GTCTTGGCAATCTCCATGCTTCGGCTTCTACCAACGTATCACAATGCGGT
CGTGGTGCGAACGCGAGATAAAGCCAAGCTTGCTCAATGCACGATCGTTT
TGGATGTCGGCGGGGAGTACGACGCGGTTCGTTTGCGTTTTGATCATCAC
CAGCGGGGTTTCGACGAAACATTGGGTGAGGGATACAAGACTAAGCTTTC
AAGCGCAGGGCTTGTATACAAGCATTTCGGAAAGGACATGCTGCGGCATT
TGATCGCAACATCCGTGGCTCCGACTCAGATGAGTTCCGCATGCATCGAG
AACATGGTGGAGAAGCTTTTCACAAAGACGTACTTCGACTTCATAGAGCA
CATTGATGGGATCGACAATGGAATAGATGTTGCGGAAAGTGATCTTCGGT
ATAAAATACAGACACACTTGCCCGGGCGCGTGGCAAAGTTAAATTCGGCC
TGGAATCAAGATGGTTCGGCTGACTCTTTGAATACTCGATTTTCCCGCGC
CCTCTCTATGGTGACTGCTGAGTTCGTAGATACTTTCATGTACCTGTGCA
ATTCATGGTGGCCGGCTCGGCGGATAGTCGCTCAAGCATTTGAGGAGAGG
AATGCGGTCCACCCAAGCGGCAAGGTGCTGCACCTGTCCTCGTACTGCCC
GTGGCAAGATCATTTGTTTGAAttggagcaggaggttggCCTCCCAGGAC
ACATCCTTTACGTCCTGTACGGCGACCCGAAGGGAAGCTCGGTGAGGATA
CATGCGGTCCCTGAGAAGATAGGATCTTTTCTATTGCGAGCACCCTTGCC
CGAGCCCTGGCGAGGGTTAAGGGATGAAATGTTGGATGACGCGGTTGGAG
GAGTTCAGGGATGCACATTTGTACATGCTAATGGCTTCATAGGTGGAAAT
AAAACCCTGAATGGGGCTATGAAGATGGTGAACAAAGCGCTGTCTCCATG
A back to topCoding sequence (CDS) from alignment at CM002462.1:450398..451498+ >rna3935 ID=rna3935|Name=rna3935|organism=Nannochloropsis gaditana|type=CDS|length=1101bp|location=Sequence derived from alignment at CM002462.1:450398..451498+ (Nannochloropsis gaditana)
ATGGAGACAGATTATTCGTTGTCAGTCCAGGAAGCCTCTCTGAAACATCC
TTCCGACGCCTCGTCCTCACCCGTGATAGTCTCAGAAGTGCCGACGGGGG
TGAGCTGTCCGATCATAGGCACGCACGACGGGACCTTCCACTGCGATGAA
GTCTTGGCAATCTCCATGCTTCGGCTTCTACCAACGTATCACAATGCGGT
CGTGGTGCGAACGCGAGATAAAGCCAAGCTTGCTCAATGCACGATCGTTT
TGGATGTCGGCGGGGAGTACGACGCGGTTCGTTTGCGTTTTGATCATCAC
CAGCGGGGTTTCGACGAAACATTGGGTGAGGGATACAAGACTAAGCTTTC
AAGCGCAGGGCTTGTATACAAGCATTTCGGAAAGGACATGCTGCGGCATT
TGATCGCAACATCCGTGGCTCCGACTCAGATGAGTTCCGCATGCATCGAG
AACATGGTGGAGAAGCTTTTCACAAAGACGTACTTCGACTTCATAGAGCA
CATTGATGGGATCGACAATGGAATAGATGTTGCGGAAAGTGATCTTCGGT
ATAAAATACAGACACACTTGCCCGGGCGCGTGGCAAAGTTAAATTCGGCC
TGGAATCAAGATGGTTCGGCTGACTCTTTGAATACTCGATTTTCCCGCGC
CCTCTCTATGGTGACTGCTGAGTTCGTAGATACTTTCATGTACCTGTGCA
ATTCATGGTGGCCGGCTCGGCGGATAGTCGCTCAAGCATTTGAGGAGAGG
AATGCGGTCCACCCAAGCGGCAAGGTGCTGCACCTGTCCTCGTACTGCCC
GTGGCAAGATCATTTGTTTGAAttggagcaggaggttggCCTCCCAGGAC
ACATCCTTTACGTCCTGTACGGCGACCCGAAGGGAAGCTCGGTGAGGATA
CATGCGGTCCCTGAGAAGATAGGATCTTTTCTATTGCGAGCACCCTTGCC
CGAGCCCTGGCGAGGGTTAAGGGATGAAATGTTGGATGACGCGGTTGGAG
GAGTTCAGGGATGCACATTTGTACATGCTAATGGCTTCATAGGTGGAAAT
AAAACCCTGAATGGGGCTATGAAGATGGTGAACAAAGCGCTGTCTCCATG
A back to top
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