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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100001g220.8252.mrna |
Orig protein id | gnl|cribi|Naga_100001g220.8252 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002462.1 | supercontig | CM002462.1:386346..387856 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3907 ID=rna3907|Name=rna3907|organism=Nannochloropsis gaditana|type=mRNA|length=3069bp ATGGGAGGTGCGGCGTCAAAGAATGTCAGGACGGAGCACTTCTCGCTGGA GGACCTGCTCACCGCGGACGACTCGGTCGACATGCGCAAAGCGACCATCA TCATTTGGAAAAACCGGCATAGGCCGGAAGTCATCAGCGAGCTTGCGGAC TTGCTCTCGGAGTACTCGGACCAGAAGACGGTCTTCGAGGGTATTGAGTT CTACCTCCCTCAGCTCGCCCACATGATTATTCACCTCGAGGTCGATTGGC CGACAGCGGCATTGGAGCAATTCGTGCTAATCGTTTGCCAACACTCGTTG CATTTCGCCCTGCAGCTGCACTTTATCTTGGTGGGCGCCATGGAAGACTA TCAGGTGGAAGGGTCGGACGGGCGCAGGACTGTGCATGGGAACCAGCGAT ACTACCGCCGGTGCGCCAAGCTCCTGCAAAACGTCCACCGGTGTGTAGTC TACGGCGCCCCCCGTGTCCGGCATCTGGAAGACCTGTACCGGTCGGGCAA GCTGAGCAAGACGGAGCTGGAGGAGCTGGGGATCGCGGAGCGGCGGTTTC AGGCGGCGCAAATTTTGGACCCGACCGAGATCACCGTGGGAGGAAAGGAG CACAGTGTCATGGAGGGGCAGCTCGCCTACAAGCGGCATCTCCGGCGCTC GTGCTGCCACTCCAAAGGCTGGAAGCTTCGCTGGTTCAAGATCCAGGACC GGGTCCTCTACTGCTACAACAGCAAGGACTGCGGACGCCTGCACCGGGCC GTTCCCTTGGAGGCGGCCGTCGTGGCCGTGGTGGACCACCCTCGGCACGA GCACTACTTCGAGGTCTCCCCGGCCGCCACCGGGGGGGCAGCCTGTGTCT ACATGCTCAAGGCGGAAACGAAGGAGGAGATGGAGCAATGGGTGAACCAG CTGAAGGCCCAGTCTATGGCCCCCACCTTTCTGCAGAAAGGGGAGGAGCA CATGCTCTACCCCGCAGAGTTCGGACGCTACCAATTCTTTAAGTCCCAGC GCGACTTTATCAACCGACTGACGGACATCTCCGAGGAGATGCGTTTCCTG GACCGAGGCATCCGCACTCGGGCCCTGAAGGAACGCCTCCCCGACGTGAA GATCCCGCCCGCCGCTTACCTGCCCCTCTGCCAGTCCACCGAACCCTGGT GTCGCATTCTGGGCCTCCTTCCCGAAGAGGCTCGGGCTTTCAGCACCAAG GAGCGCTGCCCCTGCCTGGTTCTCTTCGAGGTGGAGAAGGACATGCAGGT GGACGTGGCCAACTACTTGCACCAGCGGTACGGCGCCTTGGATGCGGAGG GAGAGACGCCGCCCTCCTTGCGTCTGAGCGCCAGCCAGGGGGGTGGGGGG CTGGAGATGGCGAACGCGAACGGTGGGAGCGATGAGACGCTCCCACGCAA AGCCGCGGAGGACGCCCAGGCAGGCGCCAACACCGACAGCCGCGCGAAAG CGCCCGCCCCCTCCACATTTGCGACCATCTTTTCCTCCATCTCGTACCAT TCGTCCTCCCAGACCGGGGCTTCCTCCGCCACTGACACTGACACCCAGGA CGCAGACGCCAATGGAAACCATGTCCCTACCTCGATCACTTCGGTGCAAT CCATTTCCAGCCTCGGGCCGTCCTCCAAACAGCACGGGCAGGAAGCCCCC CTCTGCCTGGGGCCCCTTGTGGACCGGGAGGACGAGGACGTCGGGGACGT GCAGGCAGGGGAAGGCGCTCAAGCACAGCGTCGGTTGAGTCTGCCCAGCA TCGGAATGCGCGCGTCGGCGAGCGGGCGCACGAATCCCTCCTTGTGGCGC GTCAGTCGCCCCAACATAGCGCAGGAGCTGCGGAAGATCCCGGCCGAATT TCGAGCTGCTCTTCGGAAACGGCGGATGCCCTCTATGCACAGTGCGCGTG GGGAAGGAAGAGAGATGGGGGGAGGAGCTTTGGCAGGGCTGGGGGGAAGC ACAAGGGGAGGCGGGGGGGGCGGCTTGATGAGCATGGGTTCCAAGATCGA AGCTGCGCTGGGACTTTCCATGCGGTCGTCGATGGAAGGGGAGGGAGGAC GACGAGAAAGTGACTTTGAGGACCCGAACAAGATCGTGCCCTGCTACGGG GAGGTGTGGGTGCAGAAGAGGAACCGATTGCGGGAGAAGACTTCGTTCTC GGAGGCCGTGGCGGCGGGCCGGTGGGACCTCCAGGCGGTGATCGTGAAGA GCCACGACGACGTGCGCCAGGAGGTGTTCATCATGGAGCTGATTTCCTTC TACGAGGAGGTGTTCAGGCTGGCGGGGCTCGCGATCTGGTTGCGGTCCTA CAAGATTATCAGCACCGGCAACAGCACGGGCCTGATCGCCTTCTTGACGG ACGCGATCTCCTTCGACGGGCTCAAGAAGAGCAGTGACTACCCCGGGACG TTGCGGGGCCACTTTGAGAAGATTTACGGGGGAAGCGGCTCGCCGGAATT CAAAGCCGCGCAGCAGAATTTTGCCCAGTCACTGGCGGGGTACTCCTTGC TCTCCTACCTGCTCTTCTTTAAGGACCGCCACAACGGGAACATCATGATC GACAAGAAGGGCCACGTAATCCACATTGACTTCGGCTTCGTCCTAGGGGT CAGGCCCGGGGGGAGATTTTCTTTTGAACGCGCACCCTTCAAGCTGACCG CAGAGATGCTGGAGATTCTCGACGGACCCGATTCCGCCTTATTCAGCTAC TACAAGGAGCTGATGGTCCAAGGCTTCAAGACGGCACACGCCCACGCCGA GACCGTCATCTGTCTGATGGAAATCATGTCCTTCCAGTCCAAGTTCCCGT GCTTCGTGAAAAATAGTGGACGGGCTCGTTGCTCGCTCCTACGATGCCTG TGGGACGCGGTGGTACGACAAGTTTCAATTGTGGACGAATGGGATCATGC CCTAGGCCAGCCTCGGCGTTCACGGAAGGGCGCTCAGGAGGGTGAGGGCG CCAGAATAGCGTGGAAATCCATGCATATCGGACGCGCCGATGGAGGAATC CACTGTTGCCGAGCAGGAGGGCTTGCCTTTTGTTTTTTGTGGAATTTCTC GCGTATGGGCCAGGGATGA back to topprotein sequence of rna3907 >rna3907-protein ID=rna3907-protein|Name=rna3907|organism=Nannochloropsis gaditana|type=polypeptide|length=141bp MPGPRPTKVLTVRELQMAKRMLKPKKAAACQRELNALLTAMERKENGEAN VNIRMLQTALEHCLHQAVSTSYNGEEGVNRAANVTVSAALRLCLIMNSSC SSRWVEYCLYEIFRPGSTGRGLRPVWFMHARIWQREETILS back to topmRNA from alignment at CM002462.1:386346..387856- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3907 ID=rna3907|Name=rna3907|organism=Nannochloropsis gaditana|type=mRNA|length=1511bp|location=Sequence derived from alignment at CM002462.1:386346..387856- (Nannochloropsis gaditana) ACTTCCTTCAACATTTTTCCCGATGTGGTGTTTCCCATTAGGACGCCAAA
AGGCAAAGCCAAAGCTTTACCGCTCTCCCCGTCACTCACTTCGCACTGCC
TGTTTGATGCACGTGCATACTTATGCATGATGACGGTGTATTTCTTCTGC
AAGCGGAGCATGGTCTCGGTGTGTGCGCCCTGGCGTGGACATGAGGGAGG
TCACTCGGCGACAACTTGTAGGTGACGAGGATCTGCCTGGCGCCCGTCCG
CGTTTAAAGCTATCCTAAAATCTGTATGTGCAACCCATCGGCAAGCCTCT
TCACGGCCGCCATCATCCTCACACATGCATTCACTAGCACGCCTGCACTA
ACGCGTTTAAACACAGGCTTGCGGACCAGGGAGGACGAGACTCGGGTGTT
GTCTGGCGCCCCTCTAGGAGCGTCTGCCCTGTCCTGCCGGCTTGAGAAGC
CAAGGTCTTCATATCTCCAAGTCGCCACGTTCGTTCAGACCCCCTTTGCC
ACTTCGTGAGCTTCGTGTTGCCATGCCGGGACCTAGACCGACGAAAGTAC
TGACTGTTCGTGAGCTGCAGATGGCTAAACGCATGTTGAAACCCAAGAAG
GCGGCTGCCTGCCAGCGGGAGCTCAATGCCTTGTTGACAGCCATGGAGCG
CAAGGAGAACGGGGAGGCGAATGTGAACATCAGGATGCTGCAAACTGCCT
TAGAGCACTGTTTGCACCAGGCGGTGAGTACCTCATATAATGGAGAAGAG
GGAGTTAATAGAGCAGCAAATGTCACTGTGTCCGCCGCCCTGCGCTTATG
TCTAATCATGAATTCAAGTTGCTCCTCGCGGTGGGTGGAATATTGCCTGT
ATGAAATCTTCCGGCCTGGTTCCACTGGGAGAGGGCTTCGACCTGTTTGG
TTCATGCATGCTCGAATATGGCAGAGGGAGGAGACGATTCTCTCCTGACA
GCCCTCTTGGTGTGAATAGTACCACGATCGCTTCCTGCGACACTAGCGAT
TGGACATTTAAAGGGTGGTTACGCTGGTTTTAATGGCTTCCAACGCTTAT
TTTCATATTTTTTTGGAGGTGTGTCTGTATGTGTGTACAGCAGATAGTTT
GTACGCTTGCACACAAAAATATCCGATAAATCACAAAATACATATGCTGT
TGCTCATAAATTTTCAATCTCTTCTTCCTGTTTTTCTGGGTTTCTCTGCC
CATTGATCATCTGTTTGACAGGAGCAGGAAAAGAAAATGGCAGGCCCACC
GCTCGGTCTAGGTGTTTTGGCCCGAGCAACGAAAAAGAAGCGGTAGACTT
TGTGCGACTCCATGATGGAACGCGATGCGCTCACAATCGAAAGATTTATA
AGGTGACAGCATGTCTGTGTAGCTGGTTATCTCTGGCACGCCCTTCCCTA
GGTCGGTGGATCTTACCAACAAAAAAGCTTCCCGCCCGTGTCCTGAGAGA
TTTATCTTAAGCTCTGTAAAAATAAGACGAAGCTTCCATTCCTCGACTGG
AACTCAATATG back to topCoding sequence (CDS) from alignment at CM002462.1:386346..387856- >rna3907 ID=rna3907|Name=rna3907|organism=Nannochloropsis gaditana|type=CDS|length=426bp|location=Sequence derived from alignment at CM002462.1:386346..387856- (Nannochloropsis gaditana) ATGCCGGGACCTAGACCGACGAAAGTACTGACTGTTCGTGAGCTGCAGAT GGCTAAACGCATGTTGAAACCCAAGAAGGCGGCTGCCTGCCAGCGGGAGC TCAATGCCTTGTTGACAGCCATGGAGCGCAAGGAGAACGGGGAGGCGAAT GTGAACATCAGGATGCTGCAAACTGCCTTAGAGCACTGTTTGCACCAGGC GGTGAGTACCTCATATAATGGAGAAGAGGGAGTTAATAGAGCAGCAAATG TCACTGTGTCCGCCGCCCTGCGCTTATGTCTAATCATGAATTCAAGTTGC TCCTCGCGGTGGGTGGAATATTGCCTGTATGAAATCTTCCGGCCTGGTTC CACTGGGAGAGGGCTTCGACCTGTTTGGTTCATGCATGCTCGAATATGGC AGAGGGAGGAGACGATTCTCTCCTGA back to top
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