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Properties
| Property Name | Value |
|---|
| Product | d-xylose-proton symporter-like protein |
| Orig transcript id | gnl|cribi|Naga_100018g2.2816.mrna |
| Orig protein id | gnl|cribi|Naga_100018g2.2816 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:371760..374262 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3900 ID=rna3900|Name=rna3900|organism=Nannochloropsis gaditana|type=mRNA|length=1745bp
TACAGGATACGATTGCATGTGCACAGTCACGCGGGGATCGGTGCGTGATC
AACGAACAAAATCCTCGAGATAGTGCATACATCAAACCGAAGCTACGAAC
AAGGCATATCAGCTACATTTGGCATGAGGGGTGTGTACCTCGAGGCAAGC
GAAGCGCAAGGTAGTGCATCCCATCTTCTACCAACAATTTCTGAGAGCTT
TTCACCGGCAGTATTGCATGAGCAGGATGAACCATCCTATGGCGTCTATC
GGTTCAAGCCTAATGGCGACTTTCGCAGCTTGCTTGTTCACACGGCGCCA
GACTGTATGAGCTCCATTGCGGCAGTCCTTCGCAGACCCGTCTTGTTCAC
GGTGCGGCAGATTGCAACAGATGATCCTGGACCAGAAGTGGTCATGGAAG
AAGGAAGTGATCCCGTGGATCCACAAGACCAGATTCATAATCTCAGTGGT
CAAGACCATTACCAGCGCGTTCACGGAGTATGGTGGCGGGTGGAATGGCA
TAATAAGGAGGGTTGGATGCAAGGACAGGATTCCTTAACAGGTCAACAAT
GGCCGTGTCTGCACTCTGTTACGTCGTATCGTCTTTTTGAGGCTTGGCGA
GGAGCTCACACCTTTTGGTGTCGAGGTCGGGTCATGCTGGGTCCAGATTC
GAAGGCATTCTTATGCAGTAACGTCCTTATTTTACTTCCCGCGCTTACTT
TCCTTATCTGGATCGCACCTTCCCTCCCCACTCTAATCGCTAGACTTGTG
GTGGAAATTCTTGCTGGATGCCTCATTATGAGCTCCATGTATTTCCTCTG
GCGAACTGCCTTGTCGGATCCCGGGATCATCCCCGCGCTCCCAGCACACG
TCCGGCCGGCGCCACCCACCAGTCCGATGCACGATGTTGCTCCTCTTCCT
TGTCCTGTAAAGGTATCGACGATGACGAGAGACCTGAGAGAAGGGCAAGA
AAGAGATTTGAGAAGCAGAGAGGGGCAGCTCCACGGTTGGCGGTACTGCG
AGACCTGCAACGTGTACAGGCCCCCGCGGGCGAAACATTGCCGCTCTTGC
AACTGCTGCGTCGAGCGGATGGACCATCATTGCATCTGGGTGGGCACCTG
CGTCGCCAAGAGAAATTATCGAAGCTTCGTTCTCTTCGTCCTGACCACCA
CCGTTCTCAGCGTCTTCGTCTTCGCCACATGCCTAGCTGTCGTCGTTCGT
CATTTGTTGCACTCCCCGGAGCCAGTGCAGGCACTCTGGATGGTTGCCGG
GCAGTTTCCCGCCGCTGCCGGGGTGGGAGTCTTCACCTTCGTCATGTCGT
GGTCCCTGGCCTCCCTTTGCTCTTATCACATTTACCTCATTGCCACCGCA
CAAACAACGAACGAGGCGCTTCGACGCCCCTCGCGTGGGAGGGAAAACGA
GTTCAATCAAGGCTTTTGGCAGAATTGTGTGAATGTGTGGACCGAGGACG
TAGGAGGATCGCGCTTGCCAGCCACTTTCCATAGGAAAGTGTGCGTCGAA
GCCTGGCACAAGCGTACGGCTCGCCCGGGGGGGAAGTGCCCGGAGTCATG
CAATGAGACGAAGGAAAGAGAGGGAAGCGGGGAGGAAGGGAGGCAAGATC
TACAAGGACAAAACGACGAAGGCTTTTCTGGCGACGGAGACAGGTGCCAT
CTCATGTCAACAGAAGATATGGGCCATTAGGGTCGAGCGAACGGTGAATC
CTATGTGAAAAATCAATGTAATATACTCTATAAACGTTCCTGTGA back to topprotein sequence of rna3900 >rna3900-protein ID=rna3900-protein|Name=rna3900|organism=Nannochloropsis gaditana|type=polypeptide|length=663bp
MEGSTSGMRTCAVIAIFIFCALGGLLFGWDIGATAYVLTQLQSDKAGVAW
GERIESSSVLRGFFTASAVGGALLGTVVVLQVEGSMGRRRELLLAALLYM
MGGGFEFASSFLSSDAGLVVCLLGRWIYGGGIAFAMHAAPAYLAEMSPPG
IRGFMVALKEGMIVLGILLSQVAGFIFKDMEGGWRWPFFMSVPLGAAMGL
GMSRLPSSARWLALQGRLEEAEDSLRFFMKGGVGLAMEEIKASMQDEEEW
TEADAAGGDGMDGDAGVLGDGRGMRGSGGDKSEGAKSTHHSLVLDGGEGM
KDAWKGKKRKKTTILQVLRNSRYRRPLIVGLGVVTFQQVSGQPSVLYFSN
EILRDFGLADSATLLVGVFKLVATMGAVLTVDRRGRRTLLLLGIGVMVLA
LALLSAMFAVEKEPGAKGQALDGVLIAAMFLYIAGYQVGFGPVSWILVSE
IYPTEVRGETVGLAVMANFGSNLLVTFAFDPVRESIGTSATFGLFLGVAM
AAWLFVYMLLPETKGLALEMIGAQFQSFASTSRWGSGMVGTEGLLSWFHR
HVLQGPNTQHGGQQQLAQPQNTPARPAKTLGTRSSVTQTFIEQLLPVEKQ
QDGVASIGLSDASGTTATSAKHHLLAPPPLARYGVGRMEEKATTAPMGEE
SKVESVDLGEGEV back to topmRNA from alignment at CM002462.1:371760..374262- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3900 ID=rna3900|Name=rna3900|organism=Nannochloropsis gaditana|type=mRNA|length=2503bp|location=Sequence derived from alignment at CM002462.1:371760..374262- (Nannochloropsis gaditana)
AGATCGATCGGGCCTTTTTACTATGTTGCGTACGCAGCATGTTGATTCAT
TCTGAAAATATCCCACGACGACAGCAACTGCGCCCGTGAAAGCCACTGAA
CTGCCAGACAAAGGTCTTTACAAGACGGGTGTCCAGGCATAGCTAATTTT
TCGTCCTTCTTTCGATGGAAGGATCGACATCCGGCATGCGCACTTGTGCG
GTCATCGCCATCTTCATCTTTTGTGCATTAGGTGGATTACTCTTCGGCTG
GGACATAGGTAAGAGAGCAAAGAAAGGATGAGAGAGTCATCATGAACAAT
GATTTGATTCGGAATTCGATACCCCGTGCTGTCAGGTGCGACAGCCTATG
TCTTGACACAGCTTCAGTCAGACAAAGCAGGCGTCGCGTGGGGCGAGCGG
ATCGAAAGCTCCTCTGTCCTGCGAGGGTTTTTCACGGCCTCTGCGGTAGG
AGGTGCTTTACTGGGGACTGTGGTGGTGCTGCAGGTAGAGGGCTCGATGG
GTCGGCGCCGCGAACTGCTGCTTGCGGCGCTCCTCTACATGATGGGAGGA
GGCTTCGAATTCGCCTCAAGTTTTTTGTCGAGCGATGCCGGGCTGGTGGT
ATGCCTACTGGGACGATGGATATATGGTGGAGGGATCGCCTTTGCAATGC
ACGCAGCCCCTGCCTATCTGGCGGAGATGAGCCCCCCGGGGATCCGAGGC
TTCATGGTGGCGCTAAAGGAGGGCATGATTGTGCTCGGCATCCTGCTCTC
CCAGGTGGCGGGTTTTATCTTCAAAGACATGGAGGGGGGATGGCGCTGGC
CCTTTTTCATGTCCGTCCCCTTGGGTGCGGCGATGGGGCTGGGCATGTCC
CGACTGCCCTCGTCGGCGAGGTGGTTGGCGCTTCAGGGAAGACTGGAGGA
GGCGGAAGACAGCTTGCGATTTTTTATGAAGGGGGGTGTCGGTCTGGCAA
TGGAGGAGATCAAGGCAAGCATGCAGGACGAGGAGGAGTGGACGGAGGCG
GACGCGGCGGGCGGCGACGGGATGGATGGGGATGCCGGGGTCCTTGGGGA
TGGGAGGGGCATGCGGGGCAGTGGCGGGGACAAGAGCGAGGGCGCGAAGA
GCACACACCACAGCCTTGTCCTTGACGGCGGGGAGGGCATGAAAGACGCG
TGGAAAGGGAAGAAGAGGAAGAAGACGACGATCCTACAAGTGCTTCGAAA
CAGCCGCTATCGCCGACCGTTGATAGTCGGGCTCGGCGTGGTCACCTTCC
AACAGGTCAGCGGGCAGCCCTCCGTCTTGTACTTCAGCAACGAGATTCTG
CGAGATTTCGGCCTGGCCGACTCGGCCACCCTCTTGGTGGGCGTCTTCAA
GCTGGTCGCCACCATGGGGGCCGTACTCACCGTTGACCGACGCGGGCGCC
GCACGCTGCTCCTGCTGGGGATCGGGGTCATGGTCCTTGCCCTCGCCCTT
CTGTCGGCCATGTTCGCCGTGGAGAAGGAACCGGGCGCCAAAGGGCAGGC
TCTGGACGGCGTGCTGATTGCAGCCATGTTCCTGTATATCGCCGGCTATC
AGGTGGGCTTCGGGCCCGTGAGCTGGATCTTGGTCTCGGAGATATACCCC
ACCGAGGTGCGAGGAGAGACCGTGGGTCTGGCGGTGATGGCAAACTTTGG
CTCCAATTTGCTGGTGACCTTCGCCTTCGACCCGGTGCGGGAGTCGATCG
GGACCAGCGCGACCTTCGGCTTGTTCCTGGGGGTGGCGATGGCGGCCTGG
TTGTTTGTGTACATGCTCTTACCGGAGACCAAGGGGCTGGCCTTGGAGAT
GATCGGAGCCCAGTTTCAGTCCTTTGCCTCCACCAGTCGATGGGGCAGTG
GCATGGTCGGGACCGAGGGGCTCTTGTCCTGGTTTCACCGCCATGTCCTC
CAGGGGCCTAACACCCAGCACGGAGGACAGCAGCAACTCGCACAGCCGCA
GAATACGCCAGCGAGGCCCGCCAAGACCCTGGGGACAAGAAGTAGCGTCA
CTCAAACCTTCATCGAACAGCTCCTGCCCGTGGAGAAGCAGCAAGACGGA
GTCGCGTCCATCGGCCTCTCGGACGCCAGCGGGACGACGGCGACATCGGC
CAAGCACCATCTACTGGCACCGCCTCCGCTTGCCAGGTACGGAGTGGGCA
GGATGGAAGAGAAGGCTACAACCGCTCCGATGGGAGAAGAAAGCAAGGTC
GAATCAGTCGATCTAGGTGAAGGAGAGGTTTAACGTATGACCTGTATGAG
GCTCTTTCCCGCCTCATCGTGGGTTTTTTGTTCGATCCATGGAAGAAAAA
GCATCCGTACTGAGGAGTTCCGGGAATGATTTGAACCGTCGAATATATCT
ATCCGTTATGTGTGAGTTGAAATCTTGATGTAAAGAGGAATCCTGTACAG
AGATGTGCAGTCAGCAATATCGCCTTGGGCTGGGAACAAAAAAGGTCAAA
AGGCTGTGATTTTTGCCTTTGAAAGCAATATACCAGTCTTTAGCCCAAGC
GGA back to topCoding sequence (CDS) from alignment at CM002462.1:371760..374262- >rna3900 ID=rna3900|Name=rna3900|organism=Nannochloropsis gaditana|type=CDS|length=3984bp|location=Sequence derived from alignment at CM002462.1:371760..374262- (Nannochloropsis gaditana)
GTGCGACAGCCTATGTCTTGACACAGCTTCAGTCAGACAAAGCAGGCGTC
GCGTGGGGCGAGCGGATCGAAAGCTCCTCTGTCCTGCGAGGGTTTTTCAC
GGCCTCTGCGGTAGGAGGTGCTTTACTGGGGACTGTGGTGGTGCTGCAGG
TAGAGGGCTCGATGGGTCGGCGCCGCGAACTGCTGCTTGCGGCGCTCCTC
TACATGATGGGAGGAGGCTTCGAATTCGCCTCAAGTTTTTTGTCGAGCGA
TGCCGGGCTGGTGGTATGCCTACTGGGACGATGGATATATGGTGGAGGGA
TCGCCTTTGCAATGCACGCAGCCCCTGCCTATCTGGCGGAGATGAGCCCC
CCGGGGATCCGAGGCTTCATGGTGGCGCTAAAGGAGGGCATGATTGTGCT
CGGCATCCTGCTCTCCCAGGTGGCGGGTTTTATCTTCAAAGACATGGAGG
GGGGATGGCGCTGGCCCTTTTTCATGTCCGTCCCCTTGGGTGCGGCGATG
GGGCTGGGCATGTCCCGACTGCCCTCGTCGGCGAGGTGGTTGGCGCTTCA
GGGAAGACTGGAGGAGGCGGAAGACAGCTTGCGATTTTTTATGAAGGGGG
GTGTCGGTCTGGCAATGGAGGAGATCAAGGCAAGCATGCAGGACGAGGAG
GAGTGGACGGAGGCGGACGCGGCGGGCGGCGACGGGATGGATGGGGATGC
CGGGGTCCTTGGGGATGGGAGGGGCATGCGGGGCAGTGGCGGGGACAAGA
GCGAGGGCGCGAAGAGCACACACCACAGCCTTGTCCTTGACGGCGGGGAG
GGCATGAAAGACGCGTGGAAAGGGAAGAAGAGGAAGAAGACGACGATCCT
ACAAGTGCTTCGAAACAGCCGCTATCGCCGACCGTTGATAGTCGGGCTCG
GCGTGGTCACCTTCCAACAGGTCAGCGGGCAGCCCTCCGTCTTGTACTTC
AGCAACGAGATTCTGCGAGATTTCGGCCTGGCCGACTCGGCCACCCTCTT
GGTGGGCGTCTTCAAGCTGGTCGCCACCATGGGGGCCGTACTCACCGTTG
ACCGACGCGGGCGCCGCACGCTGCTCCTGCTGGGGATCGGGGTCATGGTC
CTTGCCCTCGCCCTTCTGTCGGCCATGTTCGCCGTGGAGAAGGAACCGGG
CGCCAAAGGGCAGGCTCTGGACGGCGTGCTGATTGCAGCCATGTTCCTGT
ATATCGCCGGCTATCAGGTGGGCTTCGGGCCCGTGAGCTGGATCTTGGTC
TCGGAGATATACCCCACCGAGGTGCGAGGAGAGACCGTGGGTCTGGCGGT
GATGGCAAACTTTGGCTCCAATTTGCTGGTGACCTTCGCCTTCGACCCGG
TGCGGGAGTCGATCGGGACCAGCGCGACCTTCGGCTTGTTCCTGGGGGTG
GCGATGGCGGCCTGGTTGTTTGTGTACATGCTCTTACCGGAGACCAAGGG
GCTGGCCTTGGAGATGATCGGAGCCCAGTTTCAGTCCTTTGCCTCCACCA
GTCGATGGGGCAGTGGCATGGTCGGGACCGAGGGGCTCTTGTCCTGGTTT
CACCGCCATGTCCTCCAGGGGCCTAACACCCAGCACGGAGGACAGCAGCA
ACTCGCACAGCCGCAGAATACGCCAGCGAGGCCCGCCAAGACCCTGGGGA
CAAGAAGTAGCGTCACTCAAACCTTCATCGAACAGCTCCTGCCCGTGGAG
AAGCAGCAAGACGGAGTCGCGTCCATCGGCCTCTCGGACGCCAGCGGGAC
GACGGCGACATCGGCCAAGCACCATCTACTGGCACCGCCTCCGCTTGCCA
GGTACGGAGTGGGCAGGATGGAAGAGAAGGCTACAACCGCTCCGATGGGA
GAAGAAAGCAAGGTCGAATCAGTCGATCTAGGTGAAGGAGAGGTTTAAAT
GGAAGGATCGACATCCGGCATGCGCACTTGTGCGGTCATCGCCATCTTCA
TCTTTTGTGCATTAGGTGGATTACTCTTCGGCTGGGACATAGGTGCGACA
GCCTATGTCTTGACACAGCTTCAGTCAGACAAAGCAGGCGTCGCGTGGGG
CGAGCGGATCGAAAGCTCCTCTGTCCTGCGAGGGTTTTTCACGGCCTCTG
CGGTAGGAGGTGCTTTACTGGGGACTGTGGTGGTGCTGCAGGTAGAGGGC
TCGATGGGTCGGCGCCGCGAACTGCTGCTTGCGGCGCTCCTCTACATGAT
GGGAGGAGGCTTCGAATTCGCCTCAAGTTTTTTGTCGAGCGATGCCGGGC
TGGTGGTATGCCTACTGGGACGATGGATATATGGTGGAGGGATCGCCTTT
GCAATGCACGCAGCCCCTGCCTATCTGGCGGAGATGAGCCCCCCGGGGAT
CCGAGGCTTCATGGTGGCGCTAAAGGAGGGCATGATTGTGCTCGGCATCC
TGCTCTCCCAGGTGGCGGGTTTTATCTTCAAAGACATGGAGGGGGGATGG
CGCTGGCCCTTTTTCATGTCCGTCCCCTTGGGTGCGGCGATGGGGCTGGG
CATGTCCCGACTGCCCTCGTCGGCGAGGTGGTTGGCGCTTCAGGGAAGAC
TGGAGGAGGCGGAAGACAGCTTGCGATTTTTTATGAAGGGGGGTGTCGGT
CTGGCAATGGAGGAGATCAAGGCAAGCATGCAGGACGAGGAGGAGTGGAC
GGAGGCGGACGCGGCGGGCGGCGACGGGATGGATGGGGATGCCGGGGTCC
TTGGGGATGGGAGGGGCATGCGGGGCAGTGGCGGGGACAAGAGCGAGGGC
GCGAAGAGCACACACCACAGCCTTGTCCTTGACGGCGGGGAGGGCATGAA
AGACGCGTGGAAAGGGAAGAAGAGGAAGAAGACGACGATCCTACAAGTGC
TTCGAAACAGCCGCTATCGCCGACCGTTGATAGTCGGGCTCGGCGTGGTC
ACCTTCCAACAGGTCAGCGGGCAGCCCTCCGTCTTGTACTTCAGCAACGA
GATTCTGCGAGATTTCGGCCTGGCCGACTCGGCCACCCTCTTGGTGGGCG
TCTTCAAGCTGGTCGCCACCATGGGGGCCGTACTCACCGTTGACCGACGC
GGGCGCCGCACGCTGCTCCTGCTGGGGATCGGGGTCATGGTCCTTGCCCT
CGCCCTTCTGTCGGCCATGTTCGCCGTGGAGAAGGAACCGGGCGCCAAAG
GGCAGGCTCTGGACGGCGTGCTGATTGCAGCCATGTTCCTGTATATCGCC
GGCTATCAGGTGGGCTTCGGGCCCGTGAGCTGGATCTTGGTCTCGGAGAT
ATACCCCACCGAGGTGCGAGGAGAGACCGTGGGTCTGGCGGTGATGGCAA
ACTTTGGCTCCAATTTGCTGGTGACCTTCGCCTTCGACCCGGTGCGGGAG
TCGATCGGGACCAGCGCGACCTTCGGCTTGTTCCTGGGGGTGGCGATGGC
GGCCTGGTTGTTTGTGTACATGCTCTTACCGGAGACCAAGGGGCTGGCCT
TGGAGATGATCGGAGCCCAGTTTCAGTCCTTTGCCTCCACCAGTCGATGG
GGCAGTGGCATGGTCGGGACCGAGGGGCTCTTGTCCTGGTTTCACCGCCA
TGTCCTCCAGGGGCCTAACACCCAGCACGGAGGACAGCAGCAACTCGCAC
AGCCGCAGAATACGCCAGCGAGGCCCGCCAAGACCCTGGGGACAAGAAGT
AGCGTCACTCAAACCTTCATCGAACAGCTCCTGCCCGTGGAGAAGCAGCA
AGACGGAGTCGCGTCCATCGGCCTCTCGGACGCCAGCGGGACGACGGCGA
CATCGGCCAAGCACCATCTACTGGCACCGCCTCCGCTTGCCAGGTACGGA
GTGGGCAGGATGGAAGAGAAGGCTACAACCGCTCCGATGGGAGAAGAAAG
CAAGGTCGAATCAGTCGATCTAGGTGAAGGAGAGGTTTAAATGGAAGGAT
CGACATCCGGCATGCGCACTTGTGCGGTCATCGCCATCTTCATCTTTTGT
GCATTAGGTGGATTACTCTTCGGCTGGGACATAG back to top
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