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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100018g6.2777.mrna |
| Orig protein id | gnl|cribi|Naga_100018g6.2777 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:362149..362472 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3896 ID=rna3896|Name=rna3896|organism=Nannochloropsis gaditana|type=mRNA|length=3040bp
ATGGTCACAGCCTTCCCCTGTCATGGGATACAAACGACGTCGGGAGAAAG
GGAGTCTTCCATGCAGTGCCTCACTTAATGCGGCCCATGGACGTAAAGGT
GCCCTCTGGCCCATACCAGTCGATGTATCGTCATATCAGTGGCTACAACA
ATCACCGCATGGGACATTAGTCACTCACGGGTGCATGACAGGGTCAATTA
GACTCCCTTCACGACGTCTAATGACTTATACAACCATATTTGAACCATTC
GCTCGGATATACTTCTTCCTTCCGTCCCCAAGAATAAGGAGGAGGGTATC
AAGCCTCCTGTCACCTCCAAAGTCGTGGTCGTCTTGCCTGCAAATATTTC
TACTAGGAATATTATATTTATCAATGCCTACTAATGCAGGAGGACTATAC
AGTATTGGGACAGATTCGATGACAGGGTCCACATCTGCTCCGAGCAACTT
GGGAAAGACCGAAGGTTGCTTTTCGAAATTTGACTTTTTGCTCAGCCAGA
CATACCCCGCCGTTGAAATTGACAATCGAGTTTGTCAAGCGTTTTGTGCA
AGTCAGCGCTTTTCAGTTTCTGCCACCTCACTCAACACATGCTACTGCGG
AAATAATTACCCATCCGCGTTTTTCAAGGTCAAGGACGACATTTGCGACA
ATCCCTGCAGTCCAGACAAGACCTACTGCTTTGTGTATGCCTGCTGCGGT
TCAAGGGATGGGACGTACTTCACTGTGGCATTTGCTGGCCAGCTTCTGCG
GCAGCTGACATACGATTATCGAATGAGTAACCCTCGCCTACGAGATCACA
TAAAGACATTAATGGGTGCAAGCGCTCCTCTCCAGGTGATGTCTTCGAAT
GGTCTTAGTACGGGTGTAGTGATGAGCGGTGGGGCAGGCATTGGCCTTCA
AGGCTCCTGTCCTGACCACTACTCGGAATTTAAGGGAGCCTGCTACTCTC
GTGTCTATGGCAAAATGATGAGCTACATCCAAGCTAAAGAAAGATGTCAA
GAGGACGGGGCATCTCTTGCTGTCATTACATCTCGAGAGGAGAACGACTA
CCTGACGCGCATGTTGTTCCAGCGCCCTGGCTGGATTGGTTTAAGCAACA
GGGACGTGGGGGGGTTCCAATGGGACGACTACACGAACTGGGGCCCGGGA
GAGCCGAACAGTCTCAACGGCTTCGTCACGAAGCTCCCGGTCTCGGGTGC
AGCAACAGGAGATGCATTCGACGATTTACAAGCAGGCGTGCGCAACATTC
GACAGTTGGCCGTCTATTCTTCCTCCAGGCTTCTTGGCGTTCAGGGCCGT
TATTTATATACCAATGGTAGCGAGATAATCGGGAACGTCATGGGGACCAA
CAAGGGGGGGGACACTGCCGTTATCAGTCTCTCGTACGGGCAGTATTTCG
CTTCAGCCTTCGGAGACGTCGTGAACGACAAGCTTCAGTCATTGAATCTG
GTCGTGAAGGATGTCAAGGGCAACAGCATCACCTATGGGCCCTATGGCAC
TCCTGGTGGGAGTGGGGCCAAGTCCTGGATAGTAAACGCCACTGGGTTGC
TTGTTGGTTTCTTCGGATTCAACTCCCCTCAGGGGATCAATCAACTCGGA
TTTTATGATTTGCAGTCCCCAAGATGCGAGGAATTCACCATGTTGGCTGT
CGATCAAGATGTGGAACCAAGATGGGGGACACCTTTAGATGTCTACCTGC
AGCACTCGGCCACGGGCGCCTATTTGGGAATTGATGGCGCTGGGAACGTC
TTTACGTCCACCTCCCGCAGTAATGATGCTCAGTTGCAGGTCGTGGGAGC
TGTTAACACAACGGGGTTCACGATCAAGTCGAAAAATTACGGCTTCTATT
TGAAACTGGATCCTGACGAAGGACACCTCAAAACCCTTGACAGTAGCGTC
ATCGACGCTGACGATTTTTCCTACTATCGAAGAGAACACCAGCGGCGAGT
GCCTGTGGCGGCGACCGAAAATAGGCGGGAGAGAAATGATGCCGGCGCGG
AGGACCTCCGTGCTGATGAATCATTTATGCAGTCGGACTCCTTGTCGCCA
AAAAATAGTGAAGACGACAGCAACGAAGAAGGTATATTTGCACGCAAGCG
GCGTGCTCGCAATCGTCGGCACCAAGCACTCGACAGATCCCGTAGAGAGG
TTCTCACATTCAATGCTGGTACTGCCACACCGGTGCCCACGCCGGCCGGC
ATGAAATTTGACTCTAACGAGGCCAACAAACCAAGTGTTTTCAGTTCCAC
GAAGAGCTTCGGACCTGTTTCTGTACAAAACTTGCAAATTGGTGTGACGG
TACAAAAATCTGAAAGCATGCCTAATCCAAGGTACTGTTCGCTGAAAATC
TACGATTTGACTGCGACTTCGGATTCATTCAGCTGCTATTACATCCAAGG
TGACACGTCAAACCTTCCCATGGTCGATCTCAGCGTACAGGCGTTCACAA
TTCAAGACAAAACCACCAACATGAAGCCAAGAACGCCTTTGCAAAACGGT
CGGACCAAGTGTGAGAACGAATCTCCGACTGATACGCTGACATGTACCTT
CTCATATGGAGAGGGGCTTACCTTTAGCACAGCCTTGTCCGTAACATGGG
GCCAAAACTACGCCAACCAGTTCCAGATGGAGCGGAGATACGGCGAAAAT
ACTGCGATATGGTACAATTACTTGTACGCGTACGATAATCAGTACACGTC
CATCACTACCAACACATACGTGGAATCTAGAAATTGGGCCGTTAACGTAC
CCGTTCCACCCCTAACTGTCTGTACGATTCAGTATTGGTTAACATCTGTA
GATGTTAATTATGTTTGGCTGGCCATTTTGAAGGCTACGGGTTCTTTTGA
GCTGTCTGCCAATGGTGTGTATTTCGGCACCAATCATGCTTTGTCTGACG
TATCCGATCCCTGGGATTTAAACGTGTACCAGTGGGGCCGCTATTCCGCA
GCCTCCCAAGCGGAGGTCATCATTACGACGGACGAGATGCAAGCAGCAAA
ATATCAGCTGCAGGTGCCTCCCATGAACAATATTCCGTAG back to topprotein sequence of rna3896 >rna3896-protein ID=rna3896-protein|Name=rna3896|organism=Nannochloropsis gaditana|type=polypeptide|length=67bp
MLRNSFSTRPSPVTTTDAMAQHPYATMFGGMTFGYFVAMYFERTKYKDEY
VRDERHRPGVGIPGVSK back to topmRNA from alignment at CM002462.1:362149..362472+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3896 ID=rna3896|Name=rna3896|organism=Nannochloropsis gaditana|type=mRNA|length=324bp|location=Sequence derived from alignment at CM002462.1:362149..362472+ (Nannochloropsis gaditana)
ATGCTTCGTAATTCTTTTTCCACACGTCCTAGTCCGGTGCGTATGATTGA
CAATTTAAACGCAGCAATTGCCACCCCGTTAGTCAACACGCCATTCTATT
ATTCTGTACGTGAAATTCAGCTCTTTCAAATACCCCATATGTCTCGATAT
CGTCAGGTCACCACAACCGATGCCATGGCTCAGCACCCGTACGCAACGAT
GTTTGGCGGCATGACTTTTGGCTACTTTGTCGCGATGTATTTTGAGCGAA
CTAAGTACAAGGATGAATACGTACGGGACGAGCGCCACAGGCCGGGCGTC
GGTATTCCTGGTGTCTCAAAGTGA back to topCoding sequence (CDS) from alignment at CM002462.1:362149..362472+ >rna3896 ID=rna3896|Name=rna3896|organism=Nannochloropsis gaditana|type=CDS|length=408bp|location=Sequence derived from alignment at CM002462.1:362149..362472+ (Nannochloropsis gaditana)
ATGCTTCGTAATTCTTTTTCCACACGTCCTAGTCCGGTCACCACAACCGA
TGCCATGGCTCAGCACCCGTACGCAACGATGTTTGGCGGCATGACTTTTG
GCTACTTTGTCGCGATGTATTTTGAGCGAACTAAGTACAAGGATGAATAC
GTACGGGACGAGCGCCACAGGCCGGGCGTCGGTATTCCTGGTGTCTCAAA
GTGAATGCTTCGTAATTCTTTTTCCACACGTCCTAGTCCGGTCACCACAA
CCGATGCCATGGCTCAGCACCCGTACGCAACGATGTTTGGCGGCATGACT
TTTGGCTACTTTGTCGCGATGTATTTTGAGCGAACTAAGTACAAGGATGA
ATACGTACGGGACGAGCGCCACAGGCCGGGCGTCGGTATTCCTGGTGTCT
CAAAGTGA back to top
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