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Properties
| Property Name | Value |
|---|
| Product | diacylglycerol o |
| Orig transcript id | gnl|cribi|Naga_100018g41.2805.mrna |
| Orig protein id | gnl|cribi|Naga_100018g41.2805 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:273206..276356 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3865 ID=rna3865|Name=rna3865|organism=Nannochloropsis gaditana|type=mRNA|length=646bp
GATGCCGACAAAGATGCCATTTCTGGCACTTGACCCATGTCTTGTCCAAG
CAGAAATTGCTGCAGTCGTCTTACTCCCCTTCCTTCCCGGACATGGGCGA
AAAGGAAAGGCTCCGACGCTAAAGACCTTTCCTGCAGAATTTTTCCTGCC
CCTCCGAGAGCGGCGGCAGCGATGGCTCAAGCGACGGTGCGGTACCTTGC
TGGCCTCGGGAGGCTCCGAAAAGGACACGCCTGGCGCATGCTGTGTGCAG
GATTGCACCCTTGCAGGGCTGATGAGGGCGTTGAGGGCATCATAGACTGC
TGTGTGGTCGCATCCGAGCCAATGGGGTTGATCTTGGAGGCGTGTTCGGG
AACAGACACGTCCCAGTGGAATGATCTTGAGCCTTGCTTCCTCTCATATC
TTTTGTAGGAGGCCACTATCGGTAGAGATTCCCATAGGGCTCATCACAAA
AGGTTTGGTAAGTTTGATCCAAGTTGTTTTTGTGTCAGGGGAGTGAATTT
TGGTTTGACAGATTGTAGGCCGCCTGCGCCCCCACCGCGTGAAGGACCTT
TGGTGGAGCAATCCCCACACCCTAGCTATGCCTTTCCCCAACGTGTTGTG
GAAGAAAAAAAGTAAAATTAAACAACTATACAACGCTCTCACAAGG back to topprotein sequence of rna3865 >rna3865-protein ID=rna3865-protein|Name=rna3865|organism=Nannochloropsis gaditana|type=polypeptide|length=453bp
MIPTCQPPSGLTHPSFTYLFQAKSWEAPAVRHRSAVSHMTAFFRRRNGSG
SSTSSSSSSLAEDKHSILSSEIDPLPCSPSTTASTWKGPDVANKARESTC
LAPSHSTTSQGAAVPGQNGAIATTEDASKSDIGHLQRPPQDPLTEQILDT
GNKGTAGQGHRRRTSATLSSWASFSSSNTLSFLTGEDSSIVAPVRGPAKL
DFSTPVHPATQAVDFVITFLLVHYIQVFYSLVFLFIYLVRHGYRWPLVLA
GLYLPSYFIPFQRLGGWPFRLLMRRPFWRCVQRTLAFKVEREVELSPATQ
YIFGWHPHGILLLSRFAIYGGLWEKLFPGVHFKTLAASPLFWIPPIREVS
ILLGGVDAGRASANRALRDGYSVSLYPGGSKEIYTTNPYTPETTLVLKIR
KGFIRMALRYGCPLVPVYTFGEKYAYHRLGHATGFAHWLLAVLRVPFLIF
WGR back to topmRNA from alignment at CM002462.1:273206..276356+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3865 ID=rna3865|Name=rna3865|organism=Nannochloropsis gaditana|type=mRNA|length=3151bp|location=Sequence derived from alignment at CM002462.1:273206..276356+ (Nannochloropsis gaditana)
ggaaggaaggggagtaAGACGACTGCAGCAATTTCTGCTTGGACAAGACA
TGGGTCAAGTGCCAGAAATGGCATCTTTGTCGGCATCTGACACGCAGCTT
ATGGTAGGCAGATGATTCCGACATGCCAACCGCCATCGGGTCTCACGCAT
CCGAGCTTCACATACCTTTTCCAGGCAAAATCGTGGGAGGCACCGGCAGT
CCGGCACAGGAGTGCAGTGTCACACATGACTGCCTTCTTTCGGCGTAGGA
AtgggagtgggagcagcacaagcagcagttcctcctccttggcagaAGAC
AAGCactccatcctttcctctgaAATCGATCCACTCCCTTgttcgccctc
caccaccgccagtACATGGAAAGGGCCCGACGTGGCGAacaaggcgaggg
agtcgACCTGCCTTGCTCCATCGCACTCCACAACAAGCCAAGGCGCTGCT
GTACCTGGACAGAACGGGGCCATTGCCACTACCGAAGACGCCTCCAAGTC
TGACATAGGACACCTACAAAGACCGCCCCAGGATCCCCTTACCGAGCAGA
TTCTCGACACAGGAAACAAAGGCACGgcaggacaaggacaccGTCGGCGC
ACGTCCGCGACGCTCTCATCCtgggcttctttttcctcttcgaataccct
ttccttcttgacGGGCGAGGACTCGTCCATTGTCGCCCCCGTCCGGGGGC
CTGCCAAGCTGGATTTCTCCACGCCCGTCCACCCAGCCACGCAAGCCGTT
GATTTCGtcatcaccttcctcctcgtacgTAATCGGTCCCTGCGGTTGCT
TCCGCCCGTGTCCATTATCGTCCACGGCAACAGCACCCTGTGCTCAACCG
TCCCCTTGTcattcatcccctccccccctccttctcggccccGCAGGTGC
ATTACATCCAAGTCTTTTattccctcgtcttcctcttcatctacCTGGTC
CGGCACGGCTACCGTTGGCCCCTTGTCCTGGCcggcctctacctcccttc
ctatttTATCCCCTTCCAACGCCTGGGGGGGTGGCCCTTCCGCCTTCTCA
TGCGGCGTCCCTTCTGGCGCTGTGTCCAGCGCACGCTCGCTTTCAAAGTG
GAACGGGAGGTGGAACTCTCGCCCGCCACCCAGTACATCTTCGGCTGGCA
CCCCCAcggcatcctccttctctcccgcttTGCCATCTACGGGGGCCTCT
GGGAGAAGCTCTTCCCGGGCGTGCACTTCAAGACCTTGGCCGCCAGCCCC
TTGTTCTGGATCCCGCCCATCCGGGAGGTATCGATCCTCTtggggggcgt
ggacgcAGGGAGGGCCTCTGCCAATCGGGCCTTGCGGGACGGCTACTCCG
TCTCCCTTTACCcgggggtgagggagggagggagggagggagggaaggag
ggagggaaggaagacttgGGCTGGGAGACTGCGTAGGAAGGCTGAGGAAG
ATGCGCAATGTCAAAAGAGCCGTTAGGGTGCCtatttccctctcctttcc
cccctcatccatcttcctcctccccccccccatccctaAACCCATTGTCC
AGGGGAGCAAGGAGATCTACACGACGAACCCGTACACGCCCGAGACCACA
CTGGTGCTCAAGATTCGGAAGGGCTTCATTCGCATGGCCCTCCGGTACGG
ATGCCCCCTGGTCCCTGTCTACACCTTTGGAGAGAAGTACGCCTACCATC
GTCTCGGTCACGCCACCGGCTTCGCCCACTGGCTCCTGGCGGTGCTGCGG
GTGCCTTTTCTGATTTTCTGGGGACGGTgaggggaatgggagggagggag
ggagggaggaagtgcgtGGCCGTGCACGTCAGGCCTGCTTGTCTTCGACG
CAGTGTGTGTGTGCTCgggtgccccccccctttcccccttccttccctcc
ctcccttcctccttttcttatcttccccctcctcgttgcCCCTTCTCAAC
ATTGCGCCCCCGTTGCCCATTCCCAACGCAATGCCATGGCCCTAAAGCGC
ACTCTCCCTTCacacttcctctttcccttcctcctttcccccctgcatGA
CGTCGTAGCTGGTGCACCTTTATGCCTCTGAAGCACACGCAGGTGTCGGT
GGTGGTAGGGAAGCCCCTCCCAGTCCCCAAGATCGAGGGGGAACCCGCGC
ctgaggtggtggaggagtggtTGCAGCGGTACTGCGATGAGGTGCAGGCG
CTCTTCCAACGGTACGTCGCCCTTGACTCACGGCaacttctctttccctc
cctcccgctctacCACAcacgcggtggtggaggggaaggacgagctTTTG
CTCTCGCCCTTGTCCTATCGGGGGTCACAAAGGCCTCGCTGGTCGTCCTT
GCCTCCTACCACAGCTCACCCTCTCGTTTGCCTTTGCATGAATTCAGGCA
TAAACACAAGTACGCACGCCCGGAAGAGTTCGTGGCGATTTCGTGAGggc
ggcgggaaggacagaggaagcgaaggaggggtggagggagggaggcagga
cagGCAAAAGGCCTGCAAAGTTGTGCAGTGTGGCGAGACATGAGTCCGCG
CCGATGTAACTAGCAGAAACAGAGACATTCATTCCCAaatttggaggggg
aggaggggaagtggTGCACGCACGCGAGGTCGATGGGCAGAAAGATCGTG
CGGCCCATCCCATGGGACACAGGGGGTCTGGACAGGGGTGGTAGGGCGCC
GTCTCAAAGGGTCTCCGGAGgttgcaggaggtggagcccGCATTTGCCTC
CGTTCACAGTCGCCTggctcttttcctttttcaatccctttttttcgttC
AGTTCAGTGACAAAGCGTAGGGGCGACAGCTACGGGTGAGGGGTtggtgg
aaaggggggtTTGAGCAGAAACGGAGGTCAGGAATTTTGTGTCTTGACTC
AAGacaggcgggtgggaggcaggacggaggagggaaaaaagccGTAGGCA
TGCGGAGCACCAAGACGtaaaggcgggaagaggtgcGGAATTTTGGGAAG
AAACTTGAGATGGAGAACCGAGGAGTCTGGGGAGGAATATTTGACACGAG
AGGGGGGCatggaagagagaaggaggaagggagggcgaggaccaGAGGGA
CCCTGGAAAGAATTTTAAAAGGTTGCCTCACAGCTCACTCGCGACACCAC
C back to topCoding sequence (CDS) from alignment at CM002462.1:273206..276356+ >rna3865 ID=rna3865|Name=rna3865|organism=Nannochloropsis gaditana|type=CDS|length=4086bp|location=Sequence derived from alignment at CM002462.1:273206..276356+ (Nannochloropsis gaditana)
ATGATTCCGACATGCCAACCGCCATCGGGTCTCACGCATCCGAGCTTCAC
ATACCTTTTCCAGGCAAAATCGTGGGAGGCACCGGCAGTCCGGCACAGGA
GTGCAGTGTCACACATGACTGCCTTCTTTCGGCGTAGGAAtgggagtggg
agcagcacaagcagcagttcctcctccttggcagaAGACAAGCactccat
cctttcctctgaAATCGATCCACTCCCTTgttcgccctccaccaccgcca
gtACATGGAAAGGGCCCGACGTGGCGAacaaggcgagggagtcgACCTGC
CTTGCTCCATCGCACTCCACAACAAGCCAAGGCGCTGCTGTACCTGGACA
GAACGGGGCCATTGCCACTACCGAAGACGCCTCCAAGTCTGACATAGGAC
ACCTACAAAGACCGCCCCAGGATCCCCTTACCGAGCAGATTCTCGACACA
GGAAACAAAGGCACGgcaggacaaggacaccGTCGGCGCACGTCCGCGAC
GCTCTCATCCtgggcttctttttcctcttcgaataccctttccttcttga
cGGGCGAGGACTCGTCCATTGTCGCCCCCGTCCGGGGGCCTGCCAAGCTG
GATTTCTCCACGCCCGTCCACCCAGCCACGCAAGCCGTTGATTTCGtcat
caccttcctcctcGTGCATTACATCCAAGTCTTTTattccctcgtcttcc
tcttcatctacCTGGTCCGGCACGGCTACCGTTGGCCCCTTGTCCTGGCc
ggcctctacctcccttcctatttTATCCCCTTCCAACGCCTGGGGGGGTG
GCCCTTCCGCCTTCTCATGCGGCGTCCCTTCTGGCGCTGTGTCCAGCGCA
CGCTCGCTTTCAAAGTGGAACGGGAGGTGGAACTCTCGCCCGCCACCCAG
TACATCTTCGGCTGGCACCCCCAcggcatcctccttctctcccgcttTGC
CATCTACGGGGGCCTCTGGGAGAAGCTCTTCCCGGGCGTGCACTTCAAGA
CCTTGGCCGCCAGCCCCTTGTTCTGGATCCCGCCCATCCGGGAGGTATCG
ATCCTCTtggggggcgtggacgcAGGGAGGGCCTCTGCCAATCGGGCCTT
GCGGGACGGCTACTCCGTCTCCCTTTACCcggggGGGAGCAAGGAGATCT
ACACGACGAACCCGTACACGCCCGAGACCACACTGGTGCTCAAGATTCGG
AAGGGCTTCATTCGCATGGCCCTCCGGTACGGATGCCCCCTGGTCCCTGT
CTACACCTTTGGAGAGAAGTACGCCTACCATCGTCTCGGTCACGCCACCG
GCTTCGCCCACTGGCTCCTGGCGGTGCTGCGGGTGCCTTTTCTGATTTTC
TGGGGACGGTgaATGATTCCGACATGCCAACCGCCATCGGGTCTCACGCA
TCCGAGCTTCACATACCTTTTCCAGGCAAAATCGTGGGAGGCACCGGCAG
TCCGGCACAGGAGTGCAGTGTCACACATGACTGCCTTCTTTCGGCGTAGG
AAtgggagtgggagcagcacaagcagcagttcctcctccttggcagaAGA
CAAGCactccatcctttcctctgaAATCGATCCACTCCCTTgttcgccct
ccaccaccgccagtACATGGAAAGGGCCCGACGTGGCGAacaaggcgagg
gagtcgACCTGCCTTGCTCCATCGCACTCCACAACAAGCCAAGGCGCTGC
TGTACCTGGACAGAACGGGGCCATTGCCACTACCGAAGACGCCTCCAAGT
CTGACATAGGACACCTACAAAGACCGCCCCAGGATCCCCTTACCGAGCAG
ATTCTCGACACAGGAAACAAAGGCACGgcaggacaaggacaccGTCGGCG
CACGTCCGCGACGCTCTCATCCtgggcttctttttcctcttcgaataccc
tttccttcttgacGGGCGAGGACTCGTCCATTGTCGCCCCCGTCCGGGGG
CCTGCCAAGCTGGATTTCTCCACGCCCGTCCACCCAGCCACGCAAGCCGT
TGATTTCGtcatcaccttcctcctcGTGCATTACATCCAAGTCTTTTatt
ccctcgtcttcctcttcatctacCTGGTCCGGCACGGCTACCGTTGGCCC
CTTGTCCTGGCcggcctctacctcccttcctatttTATCCCCTTCCAACG
CCTGGGGGGGTGGCCCTTCCGCCTTCTCATGCGGCGTCCCTTCTGGCGCT
GTGTCCAGCGCACGCTCGCTTTCAAAGTGGAACGGGAGGTGGAACTCTCG
CCCGCCACCCAGTACATCTTCGGCTGGCACCCCCAcggcatcctccttct
ctcccgcttTGCCATCTACGGGGGCCTCTGGGAGAAGCTCTTCCCGGGCG
TGCACTTCAAGACCTTGGCCGCCAGCCCCTTGTTCTGGATCCCGCCCATC
CGGGAGGTATCGATCCTCTtggggggcgtggacgcAGGGAGGGCCTCTGC
CAATCGGGCCTTGCGGGACGGCTACTCCGTCTCCCTTTACCcggggGGGA
GCAAGGAGATCTACACGACGAACCCGTACACGCCCGAGACCACACTGGTG
CTCAAGATTCGGAAGGGCTTCATTCGCATGGCCCTCCGGTACGGATGCCC
CCTGGTCCCTGTCTACACCTTTGGAGAGAAGTACGCCTACCATCGTCTCG
GTCACGCCACCGGCTTCGCCCACTGGCTCCTGGCGGTGCTGCGGGTGCCT
TTTCTGATTTTCTGGGGACGGTgaATGATTCCGACATGCCAACCGCCATC
GGGTCTCACGCATCCGAGCTTCACATACCTTTTCCAGGCAAAATCGTGGG
AGGCACCGGCAGTCCGGCACAGGAGTGCAGTGTCACACATGACTGCCTTC
TTTCGGCGTAGGAAtgggagtgggagcagcacaagcagcagttcctcctc
cttggcagaAGACAAGCactccatcctttcctctgaAATCGATCCACTCC
CTTgttcgccctccaccaccgccagtACATGGAAAGGGCCCGACGTGGCG
AacaaggcgagggagtcgACCTGCCTTGCTCCATCGCACTCCACAACAAG
CCAAGGCGCTGCTGTACCTGGACAGAACGGGGCCATTGCCACTACCGAAG
ACGCCTCCAAGTCTGACATAGGACACCTACAAAGACCGCCCCAGGATCCC
CTTACCGAGCAGATTCTCGACACAGGAAACAAAGGCACGgcaggacaagg
acaccGTCGGCGCACGTCCGCGACGCTCTCATCCtgggcttctttttcct
cttcgaataccctttccttcttgacGGGCGAGGACTCGTCCATTGTCGCC
CCCGTCCGGGGGCCTGCCAAGCTGGATTTCTCCACGCCCGTCCACCCAGC
CACGCAAGCCGTTGATTTCGtcatcaccttcctcctcGTGCATTACATCC
AAGTCTTTTattccctcgtcttcctcttcatctacCTGGTCCGGCACGGC
TACCGTTGGCCCCTTGTCCTGGCcggcctctacctcccttcctatttTAT
CCCCTTCCAACGCCTGGGGGGGTGGCCCTTCCGCCTTCTCATGCGGCGTC
CCTTCTGGCGCTGTGTCCAGCGCACGCTCGCTTTCAAAGTGGAACGGGAG
GTGGAACTCTCGCCCGCCACCCAGTACATCTTCGGCTGGCACCCCCAcgg
catcctccttctctcccgcttTGCCATCTACGGGGGCCTCTGGGAGAAGC
TCTTCCCGGGCGTGCACTTCAAGACCTTGGCCGCCAGCCCCTTGTTCTGG
ATCCCGCCCATCCGGGAGGTATCGATCCTCTtggggggcgtggacgcAGG
GAGGGCCTCTGCCAATCGGGCCTTGCGGGACGGCTACTCCGTCTCCCTTT
ACCcggggGGGAGCAAGGAGATCTACACGACGAACCCGTACACGCCCGAG
ACCACACTGGTGCTCAAGATTCGGAAGGGCTTCATTCGCATGGCCCTCCG
GTACGGATGCCCCCTGGTCCCTGTCTACACCTTTGGAGAGAAGTACGCCT
ACCATCGTCTCGGTCACGCCACCGGCTTCGCCCACTGGCTCCTGGCGGTG
CTGCGGGTGCCTTTTCTGATTTTCTGGGGACGGTga back to top
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