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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100263g1.891.mrna |
| Orig protein id | gnl|cribi|Naga_100263g1.891 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:194198..195458 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3841 ID=rna3841|Name=rna3841|organism=Nannochloropsis gaditana|type=mRNA|length=2132bp
TTCAAGTCAAGGGAGGGCGAGCGCAACGGCAAGTGAGGGAGATCCTCCAG
GTCAAAAGGGGTACTCTTTTTAATGGGCGCACGCCCGCGGCACAACGTGT
GGACAGGTATCGATAAAGATGACAGTGGAATGTGGAGGAGGAAGTGCGGG
TGAAGTGGTGATAGGCATCGATGGCCGTGGCTTTCGCGGCAAGTACTTTG
AAATACCAGGACGTGTCGTACTTCGTGCTTGCGCGTACTTTCTTTGGGGA
CAAATCTTAATGCCCCAGAATCGAAATTCCCTCTTTCTACATCCGACATA
TATTCCTGTACACATTGACACACAGGCCGCGGCGCTGAGCGCCTCGGATT
CTGTTGCGCGTGCAGACAAGGCGGCTAGCCTGTCTTATAGCTGGCACGTC
ATCTCTCGGGGTTTCAGTTTGCACAAAGAGTAGGAGAACGCTTTCCATGT
CTGAAGTCACTGACCCGCTCAATTCGAGCGGTGGGAACTCTACAACGACA
CCTCGTACGCCCAATAGTGGGGCTTCGGATGAGTCGGATTCGAGTGAAAC
GGGCCTACTATTAGGACGGGTAACCGGAAGCAGCAGTACCGCCCCCGCAT
TGAACAAGAGCAGCAGAAGAAATGGGAGCACCAGTGTGAGCGGTAGCACA
ACCAGTAGCAACAACACTAGTACTACGGAGAGCGATGCGTGTATAAGAAC
GTCTCGGACCAGAGTGCGTGGTACGCCCCCTCCTTCCTCATCACCACCAC
CCTTGCCACGCCCTCCTCAATCGTCACCAGGCCTCCCACCCGCCCAGTTC
GTAGCCTCCGGCCCTCGATCCACCCCTGGAGTTGCCACTGTCAGGGAACC
CCCCGCGGACGTCTTGATACACGCAAAGTCAAGTGTCACCTGCCATGATG
GCACCTCTCAACTTGACTCCACCATACTAAATGGCGGCACGCCGGGGTCA
GAGAAGCTGATATCCCTTCGCATCAAGACGCTGGACTCCAAAGAGCATCT
GATGGAAGTGGATGCTTCCTGCTTGACCGTTTCCGAGCTCAAATCCAAGC
TCAGTCGCTCCCTGCCCGGAGCGGAAGGGAAATTTTTGCGCCTCATCACG
CAGGGTAAATTACTGACGCCAGACACGGCCTCCTTGGAGTCGTTCCGCAT
CTCGGACCGGGCGGTTGTGCATTGTGTGTTTTCGGACCAGCCGCCCCGGG
CACACATCCGAGTCGACCTGGAAAGGGGGGCAGGGTCAGGTGAGGTTGAA
TACCCGGATGTAAACGATGATCCTGCGCAACGGCGGGGCTTCGACCGGTT
GCGCACGCATGGATTCTCCATACAGGAAGTGGCTGCTTTGCGTTCATATT
TCAACGCCCAAGTGGTGGCGTACGCGGCCAGCCGGGAAGCTGAGGAAGGG
CCGGACGCGGAGACAGCCGAGGACAGGCGGCTCCGGATGGAAGACGAGTG
GATGGGGCGGCAGGGGGAGGAGAGCGAATTTGCCCTGAACACGAACCGAG
TGGTGGCCACACGTGCGGTGTTTGCTGCTAGAAGAGGAGGGATGGAGGAC
GGACGGGGTCTGGAAATGGGCACGGGCACCTCCCGCGACTTTCTCTATGG
GTTTATCATGGGGTTCGCGCTGGGATTTATCTCCCTGTTCTGGCTCTGGA
ACGTTCCTCAAACCCACACGCAGAAGATGGGCATCATCCTGGGTGTCTCC
TGTTCCCTCGGCTGGAACATCATCCGACGCGCGGAAATGGAGGGAGAGAC
GGCGGAAGGAGGGGAGGAAGGGAGTGACTTCCCCCCGGGATTTGGAGGCG
CGGGCGTGGATGGCGGACCAGCGGGAAGCGTGGGCGAGAGGGGCACGCCT
ATCCACGGAACAGGGGTAGGGCAATGATGGCACACGATAGGGGAGGCGGG
GACTCGTGTGAAGAGATAAGAGGGATCATGTGAATAGGGGCAAAGGAATT
GGTTAGTTCCCATCAGACGACACATGCATGATGGTCTAGGGCGGGGTGAG
GGGAGGAGAACGGCGCCATTGTAAGCGACGAGAAGAGGCACGAGGGGGAG
GTAAAAGATGATTTGCCGTAAGAGCCCCGAAAGAACTACATTTTTTCCGA
TGCAATCGAGTTTTTCAAAACCTAACACTTCC back to topprotein sequence of rna3841 >rna3841-protein ID=rna3841-protein|Name=rna3841|organism=Nannochloropsis gaditana|type=polypeptide|length=321bp
MHLYIMLAAASSADEWETVAEACVADLRGNVRHVARRLVAAAPKPPFLDK
KGDKFPHASQKRPETAQDQCKETGCVGKEGGRENGDGGQAQNACSSRGLR
GSYAADEYMFNYLIVRAPRSCTPPAPHAFASQCCPSWPGEMALLVLCLVD
RDSPVAQSFEFLEGLGARALGSLRRSHSSTCDEKKLEMATNAVSEISPLQ
EDHSDAGRWPRTLSRLHTSSLAVLRDYYHGCNQAYTIFPFSASAPPSHAT
LLPPAQSSPFISITAPPPPFFPASPRNPSPSLHLPPPRPPPRPPPFPPSD
LARGAHRSPQTKPEKEASSWK back to topmRNA from alignment at CM002462.1:194198..195458+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3841 ID=rna3841|Name=rna3841|organism=Nannochloropsis gaditana|type=mRNA|length=1261bp|location=Sequence derived from alignment at CM002462.1:194198..195458+ (Nannochloropsis gaditana)
ATGCATCTGTATATAATGCTAGCTGCAGCATCCAGTGCCGATGAATGGGA
GGTAGGTTATGATTGATGGGCAATACATGcgcaaagaggagggtgggtaT
CTAATGCTCCTCAATGCTTTGTTCGATAAAAACATTCACCCTGACGATAT
ACCTCGTTTGCTTCCCATTCATGGTGGACATTTAACCTCATTGCGTCTAC
TTAGACCGTTGCAGAAGCATGCGTCGCGGACTTGAGGGGTAATGTCAGAC
ATGTTGCCCGTCGTCTGGTAGCAGCTGCTCCCAAGCCGCCCTTTTTGGAT
AAGAAAGGAGACAAATTCCCACATGCATCGCAAAAAAGGCCCGAAACAGC
ACAGGATCAGTGCAAGGAGACCGGATgtgtgggaaaggaaggtgggagag
agaatggagatggaggccagGCCCAAAACGCGTGCTCGTCCCGGGGGCTT
CGTGGTAGCTATGCGGCTGACGAGTATATGTTCAACTACCTGATCGTGCG
GGCGCCAAGGTCCTGCACACCCCCAGCACCACACGCCTTTGCGTCCCAAT
GCTGTCCCTCGTGGCCGGGGGAGATGGCCTTGTTGGTTTTATGCCTGGTG
GACCGAGACTCGCCGGTCGCGCAAAGTTTTGAATTCTTGGAGGGCTTGGG
AGCCAGGGCGCTGGGAAGCCTGCGACGAAGCCACAGCAGCACGTGCGATG
AAAAGAAATTGGAAATGGCCACCAATGCCGTTTCTGAGATCTCCCCTCTC
CAGGAAGACCATTCGGATGCAGGTCGCTGGCCACGCACGCTCTCCCGGCT
CcacacttcctccctcgctgtccTCCGGGACTACTACCACGGCTGCAACC
AAGCCTACAccatctttcccttctctgcctccgcacctccctcccatgcc
acCCTCCTACCTCCAGCGCAATCTTCTCCTTTCATATCCATcacggcgcc
tcccccccccttctttcccgcctctccccggAACCCCTCACCATccctgc
atcttcctccacctcgccctccacctcgccctccaccttttcctccctcc
gacctcgCTCGTGGGGCCCATCGGTCTCCACAGACAAAGttcaccttcct
ccgcacgcccccccctccgcgcccttCGACGCCTCTGGGAGCGCGGGATG
GCCCTTTGCGCCCATCaatcccacccctccttccctccctgcctccctcc
cttcctcccctctccagaGCATGCCTACAGACCCGAGAAGGAAGCTTCCT
CTTGGAAGTGA back to topCoding sequence (CDS) from alignment at CM002462.1:194198..195458+ >rna3841 ID=rna3841|Name=rna3841|organism=Nannochloropsis gaditana|type=CDS|length=2898bp|location=Sequence derived from alignment at CM002462.1:194198..195458+ (Nannochloropsis gaditana)
ATGCATCTGTATATAATGCTAGCTGCAGCATCCAGTGCCGATGAATGGGA
GACCGTTGCAGAAGCATGCGTCGCGGACTTGAGGGGTAATGTCAGACATG
TTGCCCGTCGTCTGGTAGCAGCTGCTCCCAAGCCGCCCTTTTTGGATAAG
AAAGGAGACAAATTCCCACATGCATCGCAAAAAAGGCCCGAAACAGCACA
GGATCAGTGCAAGGAGACCGGATgtgtgggaaaggaaggtgggagagaga
atggagatggaggccagGCCCAAAACGCGTGCTCGTCCCGGGGGCTTCGT
GGTAGCTATGCGGCTGACGAGTATATGTTCAACTACCTGATCGTGCGGGC
GCCAAGGTCCTGCACACCCCCAGCACCACACGCCTTTGCGTCCCAATGCT
GTCCCTCGTGGCCGGGGGAGATGGCCTTGTTGGTTTTATGCCTGGTGGAC
CGAGACTCGCCGGTCGCGCAAAGTTTTGAATTCTTGGAGGGCTTGGGAGC
CAGGGCGCTGGGAAGCCTGCGACGAAGCCACAGCAGCACGTGCGATGAAA
AGAAATTGGAAATGGCCACCAATGCCGTTTCTGAGATCTCCCCTCTCCAG
GAAGACCATTCGGATGCAGGTCGCTGGCCACGCACGCTCTCCCGGCTCca
cacttcctccctcgctgtccTCCGGGACTACTACCACGGCTGCAACCAAG
CCTACAccatctttcccttctctgcctccgcacctccctcccatgccacC
CTCCTACCTCCAGCGCAATCTTCTCCTTTCATATCCATcacggcgcctcc
cccccccttctttcccgcctctccccggAACCCCTCACCATccctgcatc
ttcctccacctcgccctccacctcgccctccaccttttcctccctccgac
ctcgCTCGTGGGGCCCATCGGTCTCCACAGACAAAACCCGAGAAGGAAGC
TTCCTCTTGGAAGTGAATGCATCTGTATATAATGCTAGCTGCAGCATCCA
GTGCCGATGAATGGGAGACCGTTGCAGAAGCATGCGTCGCGGACTTGAGG
GGTAATGTCAGACATGTTGCCCGTCGTCTGGTAGCAGCTGCTCCCAAGCC
GCCCTTTTTGGATAAGAAAGGAGACAAATTCCCACATGCATCGCAAAAAA
GGCCCGAAACAGCACAGGATCAGTGCAAGGAGACCGGATgtgtgggaaag
gaaggtgggagagagaatggagatggaggccagGCCCAAAACGCGTGCTC
GTCCCGGGGGCTTCGTGGTAGCTATGCGGCTGACGAGTATATGTTCAACT
ACCTGATCGTGCGGGCGCCAAGGTCCTGCACACCCCCAGCACCACACGCC
TTTGCGTCCCAATGCTGTCCCTCGTGGCCGGGGGAGATGGCCTTGTTGGT
TTTATGCCTGGTGGACCGAGACTCGCCGGTCGCGCAAAGTTTTGAATTCT
TGGAGGGCTTGGGAGCCAGGGCGCTGGGAAGCCTGCGACGAAGCCACAGC
AGCACGTGCGATGAAAAGAAATTGGAAATGGCCACCAATGCCGTTTCTGA
GATCTCCCCTCTCCAGGAAGACCATTCGGATGCAGGTCGCTGGCCACGCA
CGCTCTCCCGGCTCcacacttcctccctcgctgtccTCCGGGACTACTAC
CACGGCTGCAACCAAGCCTACAccatctttcccttctctgcctccgcacc
tccctcccatgccacCCTCCTACCTCCAGCGCAATCTTCTCCTTTCATAT
CCATcacggcgcctcccccccccttctttcccgcctctccccggAACCCC
TCACCATccctgcatcttcctccacctcgccctccacctcgccctccacc
ttttcctccctccgacctcgCTCGTGGGGCCCATCGGTCTCCACAGACAA
AACCCGAGAAGGAAGCTTCCTCTTGGAAGTGAATGCATCTGTATATAATG
CTAGCTGCAGCATCCAGTGCCGATGAATGGGAGACCGTTGCAGAAGCATG
CGTCGCGGACTTGAGGGGTAATGTCAGACATGTTGCCCGTCGTCTGGTAG
CAGCTGCTCCCAAGCCGCCCTTTTTGGATAAGAAAGGAGACAAATTCCCA
CATGCATCGCAAAAAAGGCCCGAAACAGCACAGGATCAGTGCAAGGAGAC
CGGATgtgtgggaaaggaaggtgggagagagaatggagatggaggccagG
CCCAAAACGCGTGCTCGTCCCGGGGGCTTCGTGGTAGCTATGCGGCTGAC
GAGTATATGTTCAACTACCTGATCGTGCGGGCGCCAAGGTCCTGCACACC
CCCAGCACCACACGCCTTTGCGTCCCAATGCTGTCCCTCGTGGCCGGGGG
AGATGGCCTTGTTGGTTTTATGCCTGGTGGACCGAGACTCGCCGGTCGCG
CAAAGTTTTGAATTCTTGGAGGGCTTGGGAGCCAGGGCGCTGGGAAGCCT
GCGACGAAGCCACAGCAGCACGTGCGATGAAAAGAAATTGGAAATGGCCA
CCAATGCCGTTTCTGAGATCTCCCCTCTCCAGGAAGACCATTCGGATGCA
GGTCGCTGGCCACGCACGCTCTCCCGGCTCcacacttcctccctcgctgt
ccTCCGGGACTACTACCACGGCTGCAACCAAGCCTACAccatctttccct
tctctgcctccgcacctccctcccatgccacCCTCCTACCTCCAGCGCAA
TCTTCTCCTTTCATATCCATcacggcgcctcccccccccttctttcccgc
ctctccccggAACCCCTCACCATccctgcatcttcctccacctcgccctc
cacctcgccctccaccttttcctccctccgacctcgCTCGTGGGGCCCAT
CGGTCTCCACAGACAAAACCCGAGAAGGAAGCTTCCTCTTGGAAGTGA back to top
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