rna3829, rna3829 (mRNA) Nannochloropsis gaditana

Overview
Namerna3829
Unique Namerna3829
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1287
Alignment locationCM002462.1:159229..160017 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100097g14.3758.mrna
Orig protein idgnl|cribi|Naga_100097g14.3758
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:159229..160017 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100097g14gene3685Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26867.1cds3820Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3829rna3829-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3829 ID=rna3829|Name=rna3829|organism=Nannochloropsis gaditana|type=mRNA|length=1287bp
ACGCATGTACATCAAGAAACCGTACACGGCGCACAAAAATTGACATCCCG
AAGGCATCATGGATTTTTGAGAGTTCATGTTTATGTCCACATTTTCTGCA
GCTTGTGTGCTTTTGAGGCGTTGCAATCGTGCGATGCTGACGTCCAAACC
CGTCACCCTGCTTCTAATTTTGACTGTACTTTGTACAACAAATCTTTCGT
ACACAGGCATGTTTGCATTTGAGAAAGTACTGCATCGAGAAATTGGTCGC
AGCAACATGCACCCCCGGGAATAGAACTTATGGTGTGTAAGCGTTGTATG
CCTGCGAGACCCCATGGAATCCTATGCCCCTTCCACTGTCTCGTGGGTAA
TCTGGCAATTACTGGATTCAAACTTGCCCACCGGGGGTTTCGCGCATTCG
TATGGCCTTGAAGCAGCGCTGCAACTGAAGCATTTCGATCTCCAGAGCGT
CGATGAGGAAATGCGTGTCACTGGCTTGCTTGCCTTTGCCCGCCAGACAA
TGGAGCAACAGGCCTCTCTTCTCTTGCCCATGGTCAGTGCTGCACACCAT
GCAGCGAAGGACGCGACGGCACTCTTAAAGTGTACAGATGCCGGTTCATC
TGTGTCCATGGTATCTCGTTGGGCAACACTCGATAAAGAATGCCATGCAC
TGATAACCACGGAAGGTGGCCGTAGGGCTTCGACTGCTCAAGGCCTAGCA
CTGCTCCGATTAGCTTGCGACAACATCCCCTCTCTCTCTTCCCAGCACTG
TCAATGGCTGCGTACTGCCAGGGATCTGATCCGAGGGCGGGTAGGATACA
GATACAGGGACGACGCGGCGGGCGAATCGGAGTCTTTGGGAGTTTCACAC
GACATGTCCATCCTATCGGCCAGAGGGCATCAAGCTCCAGTCTTTGGTTG
GCTATGTCAGGCTTTAGGGGTGGACGCGGTCACGTGTTTCCGCATGTTCT
GTTACCTGGTTTTAAGGGACTTGATGGCAGCTGCCACGCGTCTGGGCCTG
GTGGGTCCCCTGGCTGCGGTTCGTTTGCAGATGACGTTGTACGGGGACGC
GGAAGCCGTGGTGGGGCGCTTTCTGGAACAGGAAGCTTCAGAAAGAGCAA
CAGGAGGAAAGGAAGGAGGGAGGGGTCCACGACAGGAGAATCCATTGCTG
GATATTTTGCAAGGTGCCCACGAAAAATTGTATTCTCGACTGTTCATAAG
TTAACCAATTGACGCACAAAGACATCAAAAAAGTCGGGGAAGTCTGTGCA
ATCTTGACATAGATTTGACCTGACGATGCATCGGTCA
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protein sequence of rna3829

>rna3829-protein ID=rna3829-protein|Name=rna3829|organism=Nannochloropsis gaditana|type=polypeptide|length=262bp
MPSISTRAPTTVPSISTSVPSISPTTLPKPVDENAPENNNNEEDPFDDMY
DDEVENPVVQIDLQVAGATEEQIEAVAGLVQFIAGMSFPGANRSDINVTV
EWRGTVVEMDSSQTPLPRRLRSVGEVRALPSSRRETSGKDNENKRCKLSV
GDSVNVTTITIHGLHGETYVRQIESFLALISSGIIPVVILDHIPVFKFVC
DSEVRMSNEAPSLRFQPMDVQETEKTGKDKTNVTAIVIPVVFGIALVGAV
GFLLLRKFSNRA
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mRNA from alignment at CM002462.1:159229..160017-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3829 ID=rna3829|Name=rna3829|organism=Nannochloropsis gaditana|type=mRNA|length=789bp|location=Sequence derived from alignment at CM002462.1:159229..160017- (Nannochloropsis gaditana)
ATGCCATCAATATCAACCAGAGCCCCCACTACAGTTCCCTCCATTTCTAC
TAGTGTTCCAAGCATTAGCCCTACGACACTTCCAAAACCAGTCGATGAGA
ATGCGCCAGAAAATAACAATAATGAGGAGGACCCGTTCGACGATATGTAT
GACGACGAGGTTGAGAACCCCGTGGTTCAAATTGACTTACAGGTCGCGGG
AGCCACAGAAGAGCAAATAGAAGCAGTTGCAGGCCTTGTCCAGTTTATCG
CCGGCATGTCTTTTCCGGGTGCTAATCGCTCTGACATCAATGTCACGGTT
GAGTGGAGGGGCACTGTTGTTGAGATGGATAGCAGCCAGACCCCACTTCC
CCGCCGATTGCGATCAGTAGGGGAAGTACGAGCTCTTCCATCCTCTCGTC
GTGAGACTAGCGGCAAAGATAATGAAAACAAACGCTGTAAACTGTCTGTT
GGGGACAGCGTGAATGTGACCACTATCACCATCCATGGTCTTCATGGTGA
GACCTATGTCAGGCAGATCGAGAGTTTCCTCGCGCTGATCTCGTCCGGAA
TCATACCCGTGGTGATCCTGGACCACATTCCCGTTTTTAAATTTGTCTGT
GATTCAGAAGTGCGCATGAGCAACGAAGCCCCCTCCCTTCGCTTTCAGCC
GATGGACGTCCAAGAAACAGAAAAGACAGGAAAAGATAAAACGAATGTAA
CGGCCATTGTAATACCTGTTGTATTTGGCATCGCTCTTGTCGGAGCGGTT
GGATTCCTACTTTTAAGAAAATTCAGTAATAGGGCGTAG
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Coding sequence (CDS) from alignment at CM002462.1:159229..160017-

>rna3829 ID=rna3829|Name=rna3829|organism=Nannochloropsis gaditana|type=CDS|length=789bp|location=Sequence derived from alignment at CM002462.1:159229..160017- (Nannochloropsis gaditana)
ATGCCATCAATATCAACCAGAGCCCCCACTACAGTTCCCTCCATTTCTAC
TAGTGTTCCAAGCATTAGCCCTACGACACTTCCAAAACCAGTCGATGAGA
ATGCGCCAGAAAATAACAATAATGAGGAGGACCCGTTCGACGATATGTAT
GACGACGAGGTTGAGAACCCCGTGGTTCAAATTGACTTACAGGTCGCGGG
AGCCACAGAAGAGCAAATAGAAGCAGTTGCAGGCCTTGTCCAGTTTATCG
CCGGCATGTCTTTTCCGGGTGCTAATCGCTCTGACATCAATGTCACGGTT
GAGTGGAGGGGCACTGTTGTTGAGATGGATAGCAGCCAGACCCCACTTCC
CCGCCGATTGCGATCAGTAGGGGAAGTACGAGCTCTTCCATCCTCTCGTC
GTGAGACTAGCGGCAAAGATAATGAAAACAAACGCTGTAAACTGTCTGTT
GGGGACAGCGTGAATGTGACCACTATCACCATCCATGGTCTTCATGGTGA
GACCTATGTCAGGCAGATCGAGAGTTTCCTCGCGCTGATCTCGTCCGGAA
TCATACCCGTGGTGATCCTGGACCACATTCCCGTTTTTAAATTTGTCTGT
GATTCAGAAGTGCGCATGAGCAACGAAGCCCCCTCCCTTCGCTTTCAGCC
GATGGACGTCCAAGAAACAGAAAAGACAGGAAAAGATAAAACGAATGTAA
CGGCCATTGTAATACCTGTTGTATTTGGCATCGCTCTTGTCGGAGCGGTT
GGATTCCTACTTTTAAGAAAATTCAGTAATAGGGCGTAG
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Synonyms
Publications