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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100596g2.4395.mrna |
| Orig protein id | gnl|cribi|Naga_100596g2.4395 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:83437..86230 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3800 ID=rna3800|Name=rna3800|organism=Nannochloropsis gaditana|type=mRNA|length=1488bp
ATGAAATATATTTTTCCCCTCAAAGTCTGGAGTGCTTGGCTGATTGATAA
GGCATGATATCTTACACACAAGTTACAAACACAAGTTACAGCCCGCTCAA
CAACACATATTGCTGTGAACACCGTAAAGAATCGGTAGCTTCGTTTTTTA
TCTCCATCGGTACCTCACAACTCAGGCACGATGGGTGGGTGGCGTCAAGC
ATAATTCAGACAAGAGCCAAAAAGACAAGCAAGTGAAGACATGCGCGAAT
GACACAAACTTGGTTGCGCTGTCGCATTTCCTTCGATGGAAGAACCGAGC
CACAGCCAAACGGGTGTCAATGATGATGATAATGACTTAAATAATTGGCC
CGATGGTGGCGACCTGCATAACGTGGAGTGTCAAGGCAACAGGAATTCTA
TCAATTATACATTTTTTTCACGAAATCTTGATGCGGTAGCCGACGTCCAG
CACCTGACGTTAACGGAAACGAACGTTCAAAAAGCCTTCCGGAATTTGCA
ATGCCTGGTTTGCGACGAGCGTCTGCTACTGGCCCACACCTTGTGGCACA
AGCTCATATCGTTCCTGGGAGTGACGGAGGCGGGCGTGGCAGCCCCAGAG
ACTGGCCTCTCTGAGTGCTCCAAGGGAGTCTTTCCCTCCCCCTCCCGCAT
TTCCCCCCCCACCCCCAACACTGACTCTGTGCGCCAGGCCATGGCCCACC
CTCAGACACGTGCTCGATTGGAGAGCTTGGACCGCCGGGTCAACGCCTGC
GTGGAGGCCTTGGATCTCTTTGCCTCGGAAACAGGCTGGGTTTTCGCGCA
AAAATATTTCGGCGTCAGCACACACTACCGCATGGAAGATGATGGCACGT
TGACGGTGCGCCTGCGCGCCGACTTGGAAGAGTGTTCCGTGTTCGACGAG
CTGGCAGTGTTGAGAGAGGCGGATTTGTATCCACTCTGGGCGCCGTTCGT
ACGGGCTTCCTCCCTCGTTCAGGAGGTGGGCAAATGCGAATTGGTCATCT
GGTTTCAATTCCTCGTCCCCTGGCTTGCGTCGCGAGATGCCTGCGTCCAT
ATTTTTGCATGCGATGCCACGGAGAGGGGGGTCTTGTTGTTGTGCGGGCA
GAGTATAAGGGAAGGAGAGGGCAAGGGCGGGCGGGGGGAAGGAAGGGGGA
AAGAGGGAGGCGCTGGCGGGATGGAAAAGGTCCCCCTCTTCGACGCCATC
CCGGGCTTAAACATCCCTCCGCTGGCATCGGGCTGGAATTCTGCGAGGAT
GGAAGTCCGAAAATGCTGGTGTCAAATTGAGCTTCTGGGGCCGCGCGCAT
GTTGTGTGGACGGTGAGTTGAGGAGGCAGGGAGGGAGGGGGGGGGGAGGT
GGATGGGAAGAACGCACGGAGGAAGGGCGCTGGAAAGGCACGCAGGAGAG
AAAGCTCACAATGCATGTCTATGTCAGCGGTGCAGAGTGGCCGTTTGGCA
GCGATATAAAGGATAAGAGCTCACGGTCTAGTGTCTAG back to topprotein sequence of rna3800 >rna3800-protein ID=rna3800-protein|Name=rna3800|organism=Nannochloropsis gaditana|type=polypeptide|length=440bp
MDGWVLRKDCLLTGVVSGIVFLLALFLLVVVVSTPTRAGNTSRLCSLLHC
GLTLFSSSLGLVTAALNLVDANFVFACLATIIAVSQAVDGYQTWERYRIV
YEHEGRRRPPRHTYMAYAYICVFFCLPFLITSVYWATQELGDGEAQPSSP
SANPFAYILFFLYALSVPGRLWWDSSLGCAFINRIYELRVAILASRGSGE
KALACQQDEVLVSLARRALVYLGISFTVNILIHIPLLALIPFVNVYTTVF
NLCFALATHFCFNCRGPPIDVLGFPVRAVLILSRVVRDVWRQGKCWRPRG
DRARPGQGEERAARRERRSRTEGQEAGREQVSQGGRSSDQAWEGMESEPF
SSFTPASRVRERGTDAAHTRSMGLSLLSSGPSLLESSGGFAPFFQGRAGP
GPSYSSGAGNRPQEGCGVEVLADNVEGEKPRAQVQQDGGV back to topmRNA from alignment at CM002462.1:83437..86230+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3800 ID=rna3800|Name=rna3800|organism=Nannochloropsis gaditana|type=mRNA|length=2794bp|location=Sequence derived from alignment at CM002462.1:83437..86230+ (Nannochloropsis gaditana)
AGGCACACGTTGGATTTACAACGAGGTCGTAGTATCAAACGAGAACTGGC
ACAGTAGCCtatgggaggacgggacgccAATTTTGGGCGCTTGCCTCTCC
ACGTCGTGTGTGAGATTTGGCACGTAACTCACCAAGGCCATAGGGCTTTA
TTAATCCTGCAGTAGGTAACAGGTAAAAGCGAGCCACCGATCAACGTACT
CGGTACCCACGCAGTTGTATCTGTCTCCCGTGTACGCAAGCCAGCTATTG
TTGCGACGACGCCTGCATTTGACCTTTGACCCTAACCTTTGAACTTTCGT
CCTGCCGCTTCATCCCACAGAGAGCAATCGGGGATATCGGACCTTTCCCC
CTCTAATAAGCCTTCGCCACCAGATTATCACGCCATGAATACGTGAGAAA
GATGAAGGAACAAATTTCACGATAGTAGACTTGTGCATCAACGCGGGCCT
GCCTGTTCGATGTCCAAGCTTACTCCTCGCCCTCATCTGTGCATTAATCG
CTGACTCTCCTACCTCATGTCCGATATCTAGCGTTTCCCAAAAGAAGTGC
CCCGCATACCACAAATGGATGGCTGGGTATTGCGAAAGGATTGTCTCCTC
ACTGGCGTCGTCAGCGGcattgtcttcctccttgctttgtTCCTGCTTGT
GGTCGTCGTGTCCACCCCCACCCGTGCCGGGAACACCAGCCGTCTTTGTT
CCCTCCTGCATTGTGGCCTGacgctcttctcctcgagTCTTGGCTTGGTG
ACCGCCGCCTTGAATCTGGTGGACGCCAATTTTGTCTTTGCATGCCTCGC
CACAATCATTGCCGTCTCCCAAGCCGTGGATGGCTACCAGACATGGGAGC
GTTATCGCATCGTCTACGAGCATGAGGGACGGCGTCGGCCTCCGCGGCAT
ACTTACATGGCGTATGCCTACATTTGTGTCTTTTTTTGCCTGCCCTTTTT
GATCACGTCCGTGTACTGGGCGACTCAAGAGCTGGGCGACGGGGAAGCAC
AaccatcctccccgtctgcAAACCCCTTTGCGtacatcctcttcttcctc
tacgCACTCTCCGTCCCCGGCCGCTTGTGGTGGGACTCGAGCTTGGGTTG
TGCTTTCATCAACCGGATCTATGAGCTTCGTGTCGCCATTCTGGCGTCCC
GGGGGTCGGGGGAAAAAGCATTGGCGTGTCAGCAGGACGAGGTCCTTGTC
TCTCTGGCACGACGCGCTCTTGTGTACTTGGGCATCTCCTTCACCGTGAA
TATCTTAATTCACATCCCTTTACTGGCCTTGATTCCCTTCGTGAACGTGT
ACACAACGGTCTTCAACCTGTGCTTTGCATTGGCCACGCACTTCTGCTTT
AATTGCCGGGGCCCGCCTATCGACGTGCTCGGCTTTCCAGTTCGCGCCGT
TTTGATCCTCTCTCGAGTGGTCCGGGATGTGTGGCGTCAGGGAAAGTGTT
GGCGACCCAGAGGGGATCGGGCTCGAccggggcagggagaggagagggca
gcaaggagggagcgtaGGAGTCGCACGGAGGGgcaagaggcagggaggga
gcaagtcTCCCAAGGGGGACGCTCGTCCGACCAGGCatgggaagggatgg
aaagcgaGCCGTTCAGCTCGTTCACGCCGGCGTCGCGCgtcagggagaga
gggacggacgCGGCGCACACCCGCAGCATGGgcctctccttgctctcgtC
CGGACCCTCCCTGCTCGAGTCGTCGGGAggtttcgcgccatttttccaGG
GCCGTGCGGGCCCAGGTCCGTCTTACTCGTCAGGGGCTGGAAATAGACCA
CAGGAAGGTTGCggggtggaggtgctggcagacaatgtggagggagaaaa
gccTAGGGCGCAGGTGCAGCAGGATGGTGGGGTCTAGGTagtggcagggg
agggagcgaaaaggaggagagcagaggggaaaaggggaaagaaacgAGTT
CAGCCCCAGTacgagggtggaaaggaaggaaaggaatggggaggacgggg
caaGATAGGTTGGCAAAGAAAGTTTAGGTGGCGGGTAGGCGGGGCACGCC
AAGGCGAGCACAGcggagcagcagccacgagtggaagaaaaaggacgcgg
aggaggaagacgagagaAAGCGAGGGTAGGAAAGATGTTGTAAGAATAAA
AAAGGGGACCAGgagcaaagaagggaggggagtggcgGCCATGAATGGCC
TGGATGGAGCTCTGGGCTCTGAACCTCCACGGTCCCCACCGATCAGAAAA
GTCAGGACCGCGATAATAACTCTTTTGTCCGGGGGGTTATGCCGTGACCG
GTGTACCCTTAGCATTGAGAGGGGTCGGGCAGCCTGCctcggggtggggg
cgggcacCAAGTtgtggaaaaggggggggaagtggggcacaaggacggga
gggcgaaggaagtTGGATCTCGGGAACAAGAGGGGGTATCTTTTGAATGT
ACGAATACATTCATACGTGTATATAGAATGCATTGGGCTTCACTGCTCGT
GAACGCAACGCCATGGCAGACGCGACCTGCCCCGCCATGTGCATATTCAA
GCCCAGCGCGCCCTTTTGTACCAAGGATCGTGAGCACGGCAAAGACGATT
AGGTGACTGTTGTTTTGTAGATTTGAAAGCAGGGGCGTACCGCGTGCCGG
ATGTGCGGCGTGGAGCACCCAGGGCTCCGGGCAGTAACAGGCAAAGGCCC
GACGGGTTAGAGCGATCGGGCCTGCACGCGAGCCACGCGCCCAAAGCaat
aaatatatatatacgtGAAAGCAACTGATCACGTACACCAGTCA back to topCoding sequence (CDS) from alignment at CM002462.1:83437..86230+ >rna3800 ID=rna3800|Name=rna3800|organism=Nannochloropsis gaditana|type=CDS|length=1323bp|location=Sequence derived from alignment at CM002462.1:83437..86230+ (Nannochloropsis gaditana)
ATGGATGGCTGGGTATTGCGAAAGGATTGTCTCCTCACTGGCGTCGTCAG
CGGcattgtcttcctccttgctttgtTCCTGCTTGTGGTCGTCGTGTCCA
CCCCCACCCGTGCCGGGAACACCAGCCGTCTTTGTTCCCTCCTGCATTGT
GGCCTGacgctcttctcctcgagTCTTGGCTTGGTGACCGCCGCCTTGAA
TCTGGTGGACGCCAATTTTGTCTTTGCATGCCTCGCCACAATCATTGCCG
TCTCCCAAGCCGTGGATGGCTACCAGACATGGGAGCGTTATCGCATCGTC
TACGAGCATGAGGGACGGCGTCGGCCTCCGCGGCATACTTACATGGCGTA
TGCCTACATTTGTGTCTTTTTTTGCCTGCCCTTTTTGATCACGTCCGTGT
ACTGGGCGACTCAAGAGCTGGGCGACGGGGAAGCACAaccatcctccccg
tctgcAAACCCCTTTGCGtacatcctcttcttcctctacgCACTCTCCGT
CCCCGGCCGCTTGTGGTGGGACTCGAGCTTGGGTTGTGCTTTCATCAACC
GGATCTATGAGCTTCGTGTCGCCATTCTGGCGTCCCGGGGGTCGGGGGAA
AAAGCATTGGCGTGTCAGCAGGACGAGGTCCTTGTCTCTCTGGCACGACG
CGCTCTTGTGTACTTGGGCATCTCCTTCACCGTGAATATCTTAATTCACA
TCCCTTTACTGGCCTTGATTCCCTTCGTGAACGTGTACACAACGGTCTTC
AACCTGTGCTTTGCATTGGCCACGCACTTCTGCTTTAATTGCCGGGGCCC
GCCTATCGACGTGCTCGGCTTTCCAGTTCGCGCCGTTTTGATCCTCTCTC
GAGTGGTCCGGGATGTGTGGCGTCAGGGAAAGTGTTGGCGACCCAGAGGG
GATCGGGCTCGAccggggcagggagaggagagggcagcaaggagggagcg
taGGAGTCGCACGGAGGGgcaagaggcagggagggagcaagtcTCCCAAG
GGGGACGCTCGTCCGACCAGGCatgggaagggatggaaagcgaGCCGTTC
AGCTCGTTCACGCCGGCGTCGCGCgtcagggagagagggacggacgCGGC
GCACACCCGCAGCATGGgcctctccttgctctcgtCCGGACCCTCCCTGC
TCGAGTCGTCGGGAggtttcgcgccatttttccaGGGCCGTGCGGGCCCA
GGTCCGTCTTACTCGTCAGGGGCTGGAAATAGACCACAGGAAGGTTGCgg
ggtggaggtgctggcagacaatgtggagggagaaaagccTAGGGCGCAGG
TGCAGCAGGATGGTGGGGTCTAG back to top
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