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Properties
| Property Name | Value |
|---|
| Product | protein-l-isoaspartate(d-aspartate) o-methyltransferase |
| Orig transcript id | gnl|cribi|Naga_100103g4.7043.mrna |
| Orig protein id | gnl|cribi|Naga_100103g4.7043 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:40690..43763 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3785 ID=rna3785|Name=rna3785|organism=Nannochloropsis gaditana|type=mRNA|length=3051bp
ATGCCGTCCATCTCGCCCAGCTTTTTTCTCGCTCCTCTTTTTGCGGATCC
TCTCAAGTTTTCTCAGCTCCTGGAGGACTTGATGAAATTGATTCAAGGGC
GGGAAGGCACTTGGAAACCGGCCCCGGAGTCAGAAGTTGAGCCAGAGCGA
GACTCCTTCGCACCGTCATCCGCACTCGGTGCGGGATGGAACACTCAGGG
CAAAATTACCCACCTAATAGCGGTGGAAGAAGAGAGCCATTCGGCCACGG
AAAGCAGCGCCCGGCTCGCAGAGGCCCTTGCAACCAAATTGACGGTCGGC
TACTCCACAATGGGACTCCCACCGCCTTGTTCCTCCCAAATCCCCACCTT
CAATCCTCCCGCGCCCGCTCCTCCAGGCGCTAGACATCATGTGCTCTTGT
GTGTAGCCTGGATAGGGGAGGGGAATGGGCTTTTGATAACGAGGGCGGCA
GAGGCCCTGCAGAGACTCGACAACAGGGTGCAAGGGCTGGTCACGCTGCG
CTTCGAACGAAACGAAGCTACTCAAGCCTTACAAAATAACTTTCCCATCT
TTGCCAAGAGCTGGGCGAGAGGAAGCGGGCCTCGTCCCCTCTCTCCCGAC
ACCTGCAATGCTCCAGTCAGTAACTTCTCCGGCAGAAACTTTACCAGCAG
CGGCAAAAAAAGCAGAAAGAGCGACAGTCCAGACCGAGGCGCTCAAAGCC
CACCGACTCCGCCCTGCTCGACCACCCCCACCTCGCCCTCCACCTCGAGT
TCCCTGTCTCCTTCCTGTCTAGGCGGGGCATCCGGAAGCGCAGAACAAGC
GACGACAAGCATTACCGCACATAGAACGAGTACCACTCGGCCAGTTGAAA
ACGCTGTGAAAGTAGCAACACTGGCAGCATCGAGATCAACCACAGCAGTT
TTAGAAACCGCCAGGATTCCACCAAAATGTGCCAGACCCCCCTTGGGCGG
CGATTGCTTCTCCCCTACCCTCAGCACCCCTGGAAGCATAGGGGTGGAAG
ACGAGAGGATTCAGGGCTGTGGTGAAGGGCGACAAAAGGAGGAATCGGAA
AAATGCCCGGGCGAAGGGGGAGCGATGGAGGCGCAGGGAGAAAGAGACGG
TCCAAGCGAGGCGCAGAGAAAACGACCAGACCTGTCAGGAGTTCAAAGAG
AAGAGGGGCAGGCAGAAGAAGCGTTACGCGTCTCAGGTTCACAGGGCGCA
AGCATGATGCAGCAGAAAATGGAGCAGGCTCCCAAGGATAAGTGCTGGAC
GAGCTGTTGCCAACCGAGCCAAAGGGATGCTATGTCGTCCCCACCGACTG
TTCCCCTCCTAGATGGCTTTCTACCGGCCACCACTCAGAGCCTCGCGGCG
CCCACCCCTCCGTCCTGTCCTCCCTCCCTCCCTGCCTTGTTCCTGTCCCA
TTCTACCGCTGTGGTCGAGAGCAATGATCCGGGCGAAGACCGCCACGCTT
CCCATCCTCCCGCCCTCCCTCCCTCCCTCCCCTTGACCCTCCACGGCCAT
TCCTCTGGCGGTGCTCCCATTCTCTTCGGCGAGGTAGCGGCATGCGCATT
CCCTGCGCCTGCTTCCAATCGCACCACCTCCTCCTCTACGTCGTCCCTTT
CCCTCCATGCGCCCTCCTCCTCGCCGGTGCCCTCTCCTCCCTCCTCTTGT
CCCCCGCCAATTCCTGCGCCCACCCCGCTGGCCCTTGAGACTTTCCGAGG
AGAGAGGGACGCCGCAAGGGCAGGAGAGGGGAAGGGGTTGAGGACGGATG
TGGGCGTATATCTCGTCCTGGATGGGCACGGGGGAAGCCGTGCGAGCCAG
TACATGTCAGAGCATTTGATTCCCGCCGTCCTCGAACGCTTGGGCCCGTG
TCTATCCTCCAGCGCCTCGTCCTCCTTGACGCCGTCTGCGGAGGAGGAGG
AGAAGGTGAAAACGGCCTTGAATGATGCTTTCCTCGCCGTGGACCGTGCG
TTCTTGACATCCTTGTCCGCAAACCTGACGCCGGAACAAGCGAAGGGATA
CTGGAATGCTGGCAGCTGTGCCGTGCTGGCCCTCGTCGTTGGCCGGATGC
TGTACGTGGCGCACGTGGGCGATTGCCGCGCGGTGCTGGGACAACGTGTG
CTTCCCCCAACCCCATCGCCATCGAGTCCCCCCCAGACATCTAGCGCGGC
CAACGCGGCGGCCTTGACCAGCAGAGCGGTCAGTGGCGCGAAACCTGGCG
AAGAAGGGAGGGCAGACAAAGGAGACGACGAAAATATCGCGCGGGCCCCC
CTCCCCTCTGCTTCATCCCCCCGCTCATCCAATCGAAGGAGCGCGTCTAC
GTCGCCTGTACCCCCCTCCACGCTTCCTCTCTCGGCACCTTGGCCTCCGC
AACCACCTCTTCCGTCCCGCTCTTCTCCCCGTCGCACTTGCGCCTTACAC
CGTTTGTATCCTCCCCCATCCCCTGTCACGGCCCTGGTTCTCACCAGAGA
CCATAACTGTCAAAATGCCAGCGAGGTCAAGTTGGTAAAGCAACGCACCA
CTGATAAGCATGCTATTCGAAAAAGTGCCAAGGACGCGCGCTCCGCTCAC
TATGCCTCGGGTGTAGGCGGCATCGACAGGGTGGCAGGATCTCTGGCCGT
CACGCGCGCTCTAGGCAACGGTTACCTGAAATGGCCCTCTCTCTCCTTCC
CGCCATACCTGCAACATCTTCCTTACATAACTGGCGAGCCCGTCGTCACC
GCCTACGAACTCTCCCCGACGCGCGACCTCTTTCTCCTTCTCGCTTCCGA
TGGGCTTTGGGAATTCCTTTCGAGTAAGGACGCGGTCCAGACCGTACAAG
CCTGGTGGCACCGAGAAACATTACAAGGCCAGCTCCACCGTCCTCCTAGC
TCCTCAACTGCCTACACTTCTCAACACCCTTGCACACCGGCAGCTGCCTT
AGCGGAAGAAATGATGGTGCGGGTGGCTAGGTCACACTATATGGATTTGA
ATACACTGAAGCGTTTGCCTCGAGGTGGACAACGTAGGCAGATACATGAT
GACTTGTGTGTCACAGTCGTGCAGTTCCAGTGGGAAAAGAATGAGGTCTA
A back to topprotein sequence of rna3785 >rna3785-protein ID=rna3785-protein|Name=rna3785|organism=Nannochloropsis gaditana|type=polypeptide|length=213bp
MQETHRVKPWMVAGFSLSSIAFPRDSYRFNIRRGRHATVVSFPLFVRASV
AMCAWFCSGRSNTELVHRLRASNVITSERVKEVMLRVDRGNYAPNFAYDD
SPQYLGYEQTISAPHMHAHALELLKERLVPGATVLDVGCGSGYLTAAMAR
MVEPKGRVVGIDIVKPLVSLAKNNIEKADDDLLTKGASWKPGGCFFFGGT
CPKGLGGNFLFPV back to topmRNA from alignment at CM002462.1:40690..43763+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3785 ID=rna3785|Name=rna3785|organism=Nannochloropsis gaditana|type=mRNA|length=3074bp|location=Sequence derived from alignment at CM002462.1:40690..43763+ (Nannochloropsis gaditana)
CTGCCAGTTTGCTTCTACAGCCATGGCAAACAATGCGATAGAATGTGTCC
ACCCTCGCTTACAGGAGTGAATTGATCGGGTTCTGTTGAGTCTGGAGTTG
AATGTGTGACGAAGGAAGTTTTTTGTTCGTCTTGTTCTCCATACTGGCAC
GCGGACAGAACCCCCCCCTGAAAGAACATGTTGAACGTTTGCTCGTGGCT
TTTTTTCTATCAAAACATGTGACCTTACTCTTGAGATAAAGTCATACATG
GATGTAAGCCAAGTTAGAAGAATAAAAATATCGACTTCACTGTACATTAA
TGTAAATCTAGTTCTTGAGAACGCGGTTCCTGGCGTCTAAAGTATAGGCT
GAGACACGTGGGTAAGGAGGTCATAGCAAGTAGCTACAACGTTGGAAATG
TAACCTTTTATGTTTCTCACTCCTTTAATGAACGCGGCAGCAAAAAAATA
TTCAGATTCACAATTACACATATTCTACCGTACCACATGCAGGAAACGCA
TCGGGTAAAGCCCTGGATGGTCGCAGGCTTTTCACTGTCATCTATTGCCT
TTCCCAGAGATAGTTACCGTTTTAACATACGCCGAGGCCGTCACGCTACC
GTGGTCTCATTTCCTCTGTTCGTTCGGGCTTCTGTTGCGATGTGTGCGTG
GTTTTGTTCCGGTCGCAGTAATACAGAGCTGGTGCACCGTTTACGTGCCT
CCAATGTGATAACCAGCGAGCGTGTCAAAGAGGTGCGTGCAGTGAGGTGA
AAAGTCACGACATAGGGAGGAGAGTCTAGGGAGAGTTCAGGAAATTTCTA
TTTATTGATGGCTTTATGTGTAGGGCAAGCGTGTAACATCTTGTGATACA
AAGATACACTTGCTTTCTTTTGGGGGCTCAGGTTATGCTTCGTGTTGACC
GGGGAAATTACGCGCCAAATTTTGCCTACGACGATTCCCCGCAATACCTT
GGTTACGAGCAAACAATCTCTGCCCCACATATGCACGCCCATGCACTGGA
GCTATTAAAAGAAAGACTGGTGCCTGGAGCGACGGTGAGTGAAAGTCCTG
CATTTACGAAGCAACGACCCAGGGCGAGTGGACTATAGTGCCCGTGGATG
ACTTGACTAGGGCCCTTTTGCCCTTGCCATTCTCATTTTATGTCGTCTTT
CGTGTTCTCAGGTGTTGGATGTGGGCTGTGGCTCCGGGTATTtgacggcg
gccatggcccgTATGGTGGAGCCGAAGGGGAGAGTGGTTGGCATCGACAT
CGTCAAGCCACTCGTTAGCCTGGCAAAGAACAACATAGAGAAGGCAGATG
ATGACTTGCTGACGAAAGGTGCGTCCTGGAAGCCTGGTGgctgcttcttt
tttgggggaaCGTGTCCCAAGGGCTTGGGAGGAAATTTTCTGTTTCCTGT
TTGATTGGCCTTTCCCTATATTATGCTTCACACGGTGACCATCTCCCCCA
TTGGACTCCTGTGCCCTGTCACGCATTCAAATCTTCTTTGgtccatcttc
tcctttttttgtTAGGCGTGGTCACGCTGGAATGCAAGacggggtgggaa
ggcgacaaggagaagggtcCGTACGACGCGATTCACGTCGGCGCTGCTGC
TTCCTCAGTGCCCCGCTCGCTTGTCGAACAGCTGAAGGTTTGCTTCTCAT
TCCACTAGTGGGTTGTAGCTCGCAATCTCTTGACTTGGTCCTTTATCGCC
AATCCTCCCGGGAAAAGAATCTATTAAGTTTGCCTCCCAACCCTGCGTTG
AAAACTATTGACAATGCTGACTCATAGCTGCACCAGAATATTCTTACTCC
CGTATATCCTTtatctcccccttcttccccctccctgcaaTTTAGGTTGG
CGGCATCATGATCATTCCGGTAGGGCCTGAAGGTGGGAATCAGGTACTCT
GCCGGGTGCAAAAGGTGAGTATTTTGCTCCAACTTGCATCATGTGGTCTC
TCGGCCATCCGTGCCAGAgatctttccctctctcccctcgcggtcatccc
ttttttttctgTCGCCTTTACGCGTTCTTCTCTCTCTACAGATCAAGGAT
CAAGGTCCTATCGAGGAGACATTTGTAGCGCAGGTATGTTCCGGGTAGGA
TTATTCTTAGGAGTGAAGCCATGTAAGCAAAAGTTCTCCAGGGTCTGAAC
AAAAATGCGTCGAGTGGTGAAATTTGTGGCCGACTGAACTCTAAGACAAG
CTCTCGGCTTCGGGTGTGACAAAGATTTAGCAGTTCTTCGGTGAAATTGG
TGAAGACACGAGCCCAAACGGCGACGGTTCTTTTCAGATTTCTCCTTTTG
GGAGTAGTTCTTGCTCGAAAAAACCCACACAAACATTAACTTTCCGGGCA
TGTGAGCGTCTCTGTGGATTATTCTTACGTTCTCTTTAATCTTCCAAACA
GGAGCTGCTGGGTGTGCGGTACGTCCCTCTGGTTCGTCAGAGTCCTCATG
GCTAAGCGCTCAAGACGTTTTTCAGCTTAtagggtggaaggagaaaggag
ttGGGAGGGCGAACGTTGGAAAATGTCGGTAGTCCCATTGCGAACACATT
GTGGTCGGAGAGCAAATTTGGTATGCACGGAGGCAAGAcacggaaaggaa
gagacaaAGACAAGGGACCAGTCTTCTGAAAAGGATGATTTTGAGATTCA
CGTGAAGCTAGATCGACcaggagtgggaaggagaagaggtagTAGGTCCG
TTGACGGGACGTGAGGATGACgtgaaaagaagaaaagaatgtCTGTGCTT
GATTAGCGTTACGTATTGAATACTAGCAATtaaaatatttttttcaGGAA
GAGTGGATTACAATacgaaaaggagagagaaaattCAAGTCTGCTTCGAT
CTACATGTCACGCAAAGCGAAAAGATTTTTGTTACGTGTAATGAGACTAT
AAGAGCCCTGACAGAGAATTCGTAGCAAAAAACTGATAAAAATGTATTCA
GTCTCTGATTTGTGTCTCTTTCAGGTACTATCGCGGTCCAAATCTCTATT
GTAAGCCGCTAAACTCCACGTCGTCGAACCATACCTGTTCGAGCAAGTGT
GACTCCCGCAGTGCATGCACAACC back to topCoding sequence (CDS) from alignment at CM002462.1:40690..43763+ >rna3785 ID=rna3785|Name=rna3785|organism=Nannochloropsis gaditana|type=CDS|length=1926bp|location=Sequence derived from alignment at CM002462.1:40690..43763+ (Nannochloropsis gaditana)
ATGCAGGAAACGCATCGGGTAAAGCCCTGGATGGTCGCAGGCTTTTCACT
GTCATCTATTGCCTTTCCCAGAGATAGTTACCGTTTTAACATACGCCGAG
GCCGTCACGCTACCGTGGTCTCATTTCCTCTGTTCGTTCGGGCTTCTGTT
GCGATGTGTGCGTGGTTTTGTTCCGGTCGCAGTAATACAGAGCTGGTGCA
CCGTTTACGTGCCTCCAATGTGATAACCAGCGAGCGTGTCAAAGAGGTTA
TGCTTCGTGTTGACCGGGGAAATTACGCGCCAAATTTTGCCTACGACGAT
TCCCCGCAATACCTTGGTTACGAGCAAACAATCTCTGCCCCACATATGCA
CGCCCATGCACTGGAGCTATTAAAAGAAAGACTGGTGCCTGGAGCGACGG
TGTTGGATGTGGGCTGTGGCTCCGGGTATTtgacggcggccatggcccgT
ATGGTGGAGCCGAAGGGGAGAGTGGTTGGCATCGACATCGTCAAGCCACT
CGTTAGCCTGGCAAAGAACAACATAGAGAAGGCAGATGATGACTTGCTGA
CGAAAGGTGCGTCCTGGAAGCCTGGTGgctgcttcttttttgggggaaCG
TGTCCCAAGGGCTTGGGAGGAAATTTTCTGTTTCCTGTTTGAATGCAGGA
AACGCATCGGGTAAAGCCCTGGATGGTCGCAGGCTTTTCACTGTCATCTA
TTGCCTTTCCCAGAGATAGTTACCGTTTTAACATACGCCGAGGCCGTCAC
GCTACCGTGGTCTCATTTCCTCTGTTCGTTCGGGCTTCTGTTGCGATGTG
TGCGTGGTTTTGTTCCGGTCGCAGTAATACAGAGCTGGTGCACCGTTTAC
GTGCCTCCAATGTGATAACCAGCGAGCGTGTCAAAGAGGTTATGCTTCGT
GTTGACCGGGGAAATTACGCGCCAAATTTTGCCTACGACGATTCCCCGCA
ATACCTTGGTTACGAGCAAACAATCTCTGCCCCACATATGCACGCCCATG
CACTGGAGCTATTAAAAGAAAGACTGGTGCCTGGAGCGACGGTGTTGGAT
GTGGGCTGTGGCTCCGGGTATTtgacggcggccatggcccgTATGGTGGA
GCCGAAGGGGAGAGTGGTTGGCATCGACATCGTCAAGCCACTCGTTAGCC
TGGCAAAGAACAACATAGAGAAGGCAGATGATGACTTGCTGACGAAAGGT
GCGTCCTGGAAGCCTGGTGgctgcttcttttttgggggaaCGTGTCCCAA
GGGCTTGGGAGGAAATTTTCTGTTTCCTGTTTGAATGCAGGAAACGCATC
GGGTAAAGCCCTGGATGGTCGCAGGCTTTTCACTGTCATCTATTGCCTTT
CCCAGAGATAGTTACCGTTTTAACATACGCCGAGGCCGTCACGCTACCGT
GGTCTCATTTCCTCTGTTCGTTCGGGCTTCTGTTGCGATGTGTGCGTGGT
TTTGTTCCGGTCGCAGTAATACAGAGCTGGTGCACCGTTTACGTGCCTCC
AATGTGATAACCAGCGAGCGTGTCAAAGAGGTTATGCTTCGTGTTGACCG
GGGAAATTACGCGCCAAATTTTGCCTACGACGATTCCCCGCAATACCTTG
GTTACGAGCAAACAATCTCTGCCCCACATATGCACGCCCATGCACTGGAG
CTATTAAAAGAAAGACTGGTGCCTGGAGCGACGGTGTTGGATGTGGGCTG
TGGCTCCGGGTATTtgacggcggccatggcccgTATGGTGGAGCCGAAGG
GGAGAGTGGTTGGCATCGACATCGTCAAGCCACTCGTTAGCCTGGCAAAG
AACAACATAGAGAAGGCAGATGATGACTTGCTGACGAAAGGTGCGTCCTG
GAAGCCTGGTGgctgcttcttttttgggggaaCGTGTCCCAAGGGCTTGG
GAGGAAATTTTCTGTTTCCTGTTTGA back to top
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